BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0322.p (337 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUD3.1 D8IUD3_HERSS Transcription regulator DNA-binding repres... 680 0.0 F1VVZ6.1 F1VVZ6_9BURK Ribose operon repressor 399 e-109 Q1IC23.1 Q1IC23_PSEE4 Putative ribose operon repressor RbsR 349 3e-94 C3JZP6.1 C3JZP6_PSEFS Putative ribose operon repressor 349 4e-94 E4R618.1 E4R618_PSEPB RbsR 348 9e-94 A5W5E9.1 A5W5E9_PSEP1 Transcriptional regulator, LacI family 345 6e-93 E2XV14.1 E2XV14_PSEFL Transcriptional regulator, LacI family 345 6e-93 Q88K35.1 Q88K35_PSEPK Ribose operon repressor 345 7e-93 Q3KEZ1.1 Q3KEZ1_PSEPF Putative ribose operon repressor 343 2e-92 F2KJ34.1 F2KJ34_PSEBR Transcription factor, LacI family; ribose ... 343 3e-92 >D8IUD3.1 D8IUD3_HERSS Transcription regulator DNA-binding repressor protein Length = 337 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/337 (100%), Positives = 337/337 (100%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG Sbjct: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI Sbjct: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 Query: 121 IATLNQADLNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVACI 180 IATLNQADLNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVACI Sbjct: 121 IATLNQADLNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVACI 180 Query: 181 AGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQRPD 240 AGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQRPD Sbjct: 181 AGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQRPD 240 Query: 241 AIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGNLT 300 AIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGNLT Sbjct: 241 AIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGNLT 300 Query: 301 AQFLLERIADPSLPARRETVAPQLQLRGSTAPRVNPT 337 AQFLLERIADPSLPARRETVAPQLQLRGSTAPRVNPT Sbjct: 301 AQFLLERIADPSLPARRETVAPQLQLRGSTAPRVNPT 337 >F1VVZ6.1 F1VVZ6_9BURK Ribose operon repressor Length = 332 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/330 (64%), Positives = 250/330 (75%), Gaps = 1/330 (0%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIK VA++AGVS+TTVSHV+N TRPVS+DAR RVLAA+ +L YVPSALARSL+S+ TG Sbjct: 1 MATIKQVAQVAGVSFTTVSHVINLTRPVSADARARVLAAIAQLHYVPSALARSLKSQRTG 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGLIIPNNTNPYFSE+ARGIEDHCYGAGYSVILCN DDP +QR+YL VL K CDGLI Sbjct: 61 TIGLIIPNNTNPYFSEVARGIEDHCYGAGYSVILCNFGDDPARQRNYLNVLLGKRCDGLI 120 Query: 121 IATLNQADLNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVACI 180 +A L AD IP VLLDRAP+ D+V DN GG LAA+HLL L R R+ACI Sbjct: 121 MAALAPADGELLHTKKIPVVLLDRAPRGQSFDVVDVDNVAGGVLAAQHLLALGRRRIACI 180 Query: 181 AGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQRPD 240 GP + LS R+ G R TL + GL LA + +ADF+ +GGYQ A LL A QRPD Sbjct: 181 GGPQEITLSRLRLDGLRATLAEAGLPLAPALCRYADFTSMGGYQQARALLALP-AAQRPD 239 Query: 241 AIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGNLT 300 AIFCCND+MAIGVLRAA E I VP L+VVGFDDI+LA+FV+P L++VAQNTR LG LT Sbjct: 240 AIFCCNDLMAIGVLRAAAEAGIAVPQALAVVGFDDIDLARFVYPALSSVAQNTRALGQLT 299 Query: 301 AQFLLERIADPSLPARRETVAPQLQLRGST 330 AQ LL RIA+P LP ++ T+ P L +R S+ Sbjct: 300 AQCLLARIANPDLPLQQHTMTPALHVRESS 329 >Q1IC23.1 Q1IC23_PSEE4 Putative ribose operon repressor RbsR Length = 340 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 237/336 (70%), Gaps = 7/336 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHVLN+TRPVS R +V AA+ ELDYVPSA+ARSL+++ T Sbjct: 1 MATIKDVAALAGISYTTVSHVLNKTRPVSEHVRLKVEAAIAELDYVPSAVARSLKARSTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED C GY VILCNSDD+P KQR YL+VL K DGLI Sbjct: 61 TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLI 120 Query: 121 IATL--NQADLNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVA 178 +A++ +Q L+ G + P V++DRA + DLV D+ G LA RHLL+L +A Sbjct: 121 VASVGEDQDLLDSLGGVRTPMVIVDRALDGVAADLVRIDHEHGAYLATRHLLELGHREIA 180 Query: 179 CIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQR 238 IAGP +S R+ GFR+ + + G+A+A +LH+DF+ GG+ AA RLL G +R Sbjct: 181 TIAGPADTGVSQLRLAGFRRAMAEAGVAVAKGHVLHSDFTSPGGHAAAARLLDG----ER 236 Query: 239 PDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGN 298 P AIF NDM+ GVLRAA E I+VPGELSV+GFDDIEL+++V+P LTTV Q+ R+LG Sbjct: 237 PTAIFAANDMIGFGVLRAAAERNIDVPGELSVIGFDDIELSRYVYPALTTVGQSIRELGE 296 Query: 299 LTAQFLLERI-ADPSLPARRETVAPQLQLRGSTAPR 333 A LL RI A A + VAP++ LR ST PR Sbjct: 297 SAAGLLLSRIGARQHEGAEQRIVAPRIVLRESTGPR 332 >C3JZP6.1 C3JZP6_PSEFS Putative ribose operon repressor Length = 340 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 232/335 (69%), Gaps = 7/335 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHV+N+TRPVS R +V AA+K+LDYVPSA+ARSL++K T Sbjct: 1 MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED+C GY VILCNSDD+ +KQR YL+VL K DGLI Sbjct: 61 TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRSYLRVLLEKRIDGLI 120 Query: 121 IATLNQADLNPAGKLD---IPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRV 177 + ++ D A L P V++DRA +D+DLV D+ G LA RHLL+L + Sbjct: 121 VTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRDI 180 Query: 178 ACIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQ 237 ACI GP ++ R+ G+ + L++ G+A+A + +DF+ GGY AA++LL P Sbjct: 181 ACIGGPAHTRVAQMRLAGYHRALQEAGVAVAANRTQESDFTSTGGYTAAVQLLANNP--- 237 Query: 238 RPDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLG 297 P AIF NDM+ GVLRAA E I VPGELSV+GFDDI++ ++V+P LTTV Q+ +LG Sbjct: 238 -PSAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLG 296 Query: 298 NLTAQFLLERIADPSLPARRETVAPQLQLRGSTAP 332 A+ LL RIA P LP + V P + LR STAP Sbjct: 297 ETAAELLLRRIATPQLPIDQRIVTPSIVLRESTAP 331 >E4R618.1 E4R618_PSEPB RbsR Length = 340 Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 183/336 (54%), Positives = 234/336 (69%), Gaps = 7/336 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHVLN+TRPVS R +V AA+ ELDYVPSA+ARSL+++ T Sbjct: 1 MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED C GY VILCNSDD+P KQR YL+VL K DGL+ Sbjct: 61 TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120 Query: 121 IATLNQAD--LNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVA 178 +A++ Q D L + P V++DR + +D DLV D+ G LA RHLL+L VA Sbjct: 121 VASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVA 180 Query: 179 CIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQR 238 I GP ++ R+ GFR+ + + G + S +LH DF+ GG+ AA ++L+G+ R Sbjct: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGK----R 236 Query: 239 PDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGN 298 P AIF NDM+ GVLRAA E I VPGELSV+GFDDIEL+++V+PPLTTV Q+ R+LG Sbjct: 237 PSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPPLTTVGQSIRELGE 296 Query: 299 LTAQFLLERIADPSL-PARRETVAPQLQLRGSTAPR 333 A LL RIA P A + VAP++ LR ST PR Sbjct: 297 SAASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPR 332 >A5W5E9.1 A5W5E9_PSEP1 Transcriptional regulator, LacI family Length = 340 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 182/336 (54%), Positives = 234/336 (69%), Gaps = 7/336 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHVLN+TRPVS R +V AA+ ELDYVPSA+ARSL+++ T Sbjct: 1 MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIVELDYVPSAVARSLKARSTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED C GY VILCNSDD+P KQR YL+VL K DGL+ Sbjct: 61 TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120 Query: 121 IATLNQAD--LNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVA 178 +A++ Q D L + P V++DR + +D DLV D+ G LA +HLL+L VA Sbjct: 121 VASVGQDDDLLQSLAGVRTPMVIVDRELEGVDADLVRIDHEQGAYLATQHLLELGHRDVA 180 Query: 179 CIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQR 238 I GP ++ R+ GFR+ + + G + S +LH DF+ GG+ AA ++L+G+ R Sbjct: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVLGSRVLHCDFTSPGGHAAAAQVLEGK----R 236 Query: 239 PDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGN 298 P AIF NDM+ GVLRAA E I VPGELSV+GFDDIEL+++V+PPLTTV Q+ R+LG Sbjct: 237 PSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPPLTTVGQSIRELGE 296 Query: 299 LTAQFLLERIADPSL-PARRETVAPQLQLRGSTAPR 333 A LL RIA P A + VAP++ LR ST PR Sbjct: 297 SAASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPR 332 >E2XV14.1 E2XV14_PSEFL Transcriptional regulator, LacI family Length = 340 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 231/335 (68%), Gaps = 7/335 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHV+N+TRPVS R +V AA+K+LDYVPSA+ARSL++K T Sbjct: 1 MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED+C GY VILCNSDD+ +KQR YL+VL K DGLI Sbjct: 61 TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRSYLRVLLEKRIDGLI 120 Query: 121 IATLNQADLNPAGKLD---IPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRV 177 + ++ D A L P V++DRA +D+DLV D+ G LA RHLL+L + Sbjct: 121 VTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRDI 180 Query: 178 ACIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQ 237 ACI GP ++ R+ G+++ L + G+ +A + +DF+ GGY AA++LL P Sbjct: 181 ACIGGPAHTRVAQMRLAGYQRALREAGIDVAAHRIQASDFTSTGGYAAAVQLLAQNP--- 237 Query: 238 RPDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLG 297 P AIF NDM+ GVLRAA E I VPGELSV+GFDDI++ ++V+P LTTV Q+ +LG Sbjct: 238 -PSAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSILQLG 296 Query: 298 NLTAQFLLERIADPSLPARRETVAPQLQLRGSTAP 332 A+ LL RIA P LP + V P + LR STAP Sbjct: 297 ETAAELLLRRIATPQLPIDQRIVTPSIVLRESTAP 331 >Q88K35.1 Q88K35_PSEPK Ribose operon repressor Length = 340 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 182/336 (54%), Positives = 233/336 (69%), Gaps = 7/336 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHVLN+TRPVS R +V AA+ ELDYVPSA+ARSL+++ T Sbjct: 1 MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED C GY VILCNSDD+P KQR YL+VL K DGL+ Sbjct: 61 TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120 Query: 121 IATLNQAD--LNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVA 178 +A++ Q D L + P V++DR + +D DLV D+ G LA RHLL+L VA Sbjct: 121 VASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVA 180 Query: 179 CIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQR 238 I GP ++ R+ GFR+ + + G + S +LH DF+ GG+ AA ++L+G+ R Sbjct: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGK----R 236 Query: 239 PDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGN 298 P AIF NDM+ GVLRAA E I VPGELSV+GFDDIEL+++V+P LTTV Q+ R+LG Sbjct: 237 PSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGE 296 Query: 299 LTAQFLLERIADPSL-PARRETVAPQLQLRGSTAPR 333 A LL RIA P A + VAP++ LR ST PR Sbjct: 297 SAASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPR 332 >Q3KEZ1.1 Q3KEZ1_PSEPF Putative ribose operon repressor Length = 339 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 230/334 (68%), Gaps = 6/334 (1%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHV+N+TRPVS + R +V AA+K LDYVPSA+ARSL++K T Sbjct: 1 MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED+C GY VILCNSDD+PDKQR YL+VL K DGLI Sbjct: 61 TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI 120 Query: 121 IATLNQADLNPAG--KLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVA 178 +A+ G + P V++DR + +D DLV D+ G LA RHLL+L +A Sbjct: 121 VASAGGDSGLAQGLAGVKTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDIA 180 Query: 179 CIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQR 238 I GP ++ R GF + L++ G+ +A S +L +DF+ GGY AA LL+ P Sbjct: 181 TIGGPASTSVAQMRQAGFARALKEAGVEVAPSRMLESDFTSTGGYNAASILLERNP---- 236 Query: 239 PDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGN 298 P AIF NDM+ IGVLRAA E + VP ELSV+GFDDI+++++V+P LTTV Q+ +LG Sbjct: 237 PSAIFAGNDMIGIGVLRAAAERNVRVPAELSVIGFDDIQMSRYVYPALTTVGQSILQLGE 296 Query: 299 LTAQFLLERIADPSLPARRETVAPQLQLRGSTAP 332 + A+ LL RIA P L + V P + LR STAP Sbjct: 297 MAAEVLLRRIATPDLATDQRIVTPSIVLRESTAP 330 >F2KJ34.1 F2KJ34_PSEBR Transcription factor, LacI family; ribose transcription repressor Length = 339 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 176/335 (52%), Positives = 233/335 (69%), Gaps = 8/335 (2%) Query: 1 MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG 60 MATIKDVA LAG+SYTTVSHV+N+TRPVS + R +V AA++ LDYVPSA+ARSL++K T Sbjct: 1 MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTA 60 Query: 61 SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI 120 +IGL++PN+ NPYF+ELARGIED+C GY VILCNSDD+PDKQR YL+VL K DGLI Sbjct: 61 TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI 120 Query: 121 IATLNQADLNPAGKLD---IPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRV 177 A+ D+ A L P V++DR + +D DLV D+ G LA RHLL+L + Sbjct: 121 FASAG-GDVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDI 179 Query: 178 ACIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQ 237 A I GP ++ R+ G+ + L++ G+ L +L +DF+ GGY+AA +LL+ +P Sbjct: 180 AFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQLLEQQP--- 236 Query: 238 RPDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLG 297 P AIF NDM+ IGVLRAA E + VP ELSV+GFDDI+++++V+P LTTV Q+ +LG Sbjct: 237 -PSAIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLG 295 Query: 298 NLTAQFLLERIADPSLPARRETVAPQLQLRGSTAP 332 + A+ LL RIA P L + V P + LR STAP Sbjct: 296 EMAAEVLLRRIATPGLATEQRIVTPSIVLRESTAP 330