BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0304.p         (68 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G4M8.1 A4G4M8_HERAR Putative uncharacterized protein                103   1e-20

>A4G4M8.1 A4G4M8_HERAR Putative uncharacterized protein
          Length = 67

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 58/68 (85%), Gaps = 1/68 (1%)

Query: 1  MDLVEKFDAKGKTGAPYHVEVYQTQQDEADEAVQAFSRTYKLTDGRALDPLTNEKFRIVQ 60
          MDLVEKFDAKGKTGA YHVEVYQT  + +DE     S+TY+LTDGRALDPL++ KF+IVQ
Sbjct: 1  MDLVEKFDAKGKTGAAYHVEVYQTPIETSDEGSPG-SKTYQLTDGRALDPLSDAKFKIVQ 59

Query: 61 TGEKIYRV 68
          TGEKIYRV
Sbjct: 60 TGEKIYRV 67