BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0277.p (279 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZG0.1 D8IZG0_HERSS Transmembrane protein 568 e-160 D8IST1.1 D8IST1_HERSS Peptidase M15B and M15C, D,D-carboxypeptid... 449 e-124 B1YSB6.1 B1YSB6_BURA4 Peptidase M15B and M15C DD-carboxypeptidas... 250 1e-64 B1FRE9.1 B1FRE9_9BURK Peptidase M15B and M15C DD-carboxypeptidas... 248 5e-64 B1TG78.1 B1TG78_9BURK Peptidase M15B and M15C DD-carboxypeptidas... 248 5e-64 Q0BIS0.1 Q0BIS0_BURCM Peptidase M15B and M15C, D,D-carboxypeptid... 248 6e-64 A3MQY5.1 A3MQY5_BURM7 Serine-type D-Ala-D-Ala carboxypeptidase 247 2e-63 A2S6Y0.1 A2S6Y0_BURM9 Serine-type D-Ala-D-Ala carboxypeptidase 247 2e-63 A1UZJ7.1 A1UZJ7_BURMS D-alanyl-D-alanine carboxypeptidase family... 247 2e-63 C5NEM2.1 C5NEM2_BURMA D-alanyl-D-alanine carboxypeptidase family... 247 2e-63 >D8IZG0.1 D8IZG0_HERSS Transmembrane protein Length = 279 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 277/279 (99%), Positives = 279/279 (100%) Query: 1 VLFLLIIFYLLVTCFAMWLLLFPSGRELTLAFINSRMASLRQRWDRWNRKGDAVLAGTAS 60 +LFLLIIFYLLVTCFAMWLLLFPSGRELTLAF+NSRMASLRQRWDRWNRKGDAVLAGTAS Sbjct: 1 MLFLLIIFYLLVTCFAMWLLLFPSGRELTLAFLNSRMASLRQRWDRWNRKGDAVLAGTAS 60 Query: 61 GIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVANAQIAEL 120 GIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVANAQIAEL Sbjct: 61 GIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVANAQIAEL 120 Query: 121 LKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIMKEKYGI 180 LKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIMKEKYGI Sbjct: 121 LKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIMKEKYGI 180 Query: 181 EMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM 240 EMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM Sbjct: 181 EMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM 240 Query: 241 EAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPGVMKK 279 EAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPGVMKK Sbjct: 241 EAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPGVMKK 279 >D8IST1.1 D8IST1_HERSS Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins protein Length = 279 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 212/279 (75%), Positives = 241/279 (86%) Query: 1 VLFLLIIFYLLVTCFAMWLLLFPSGRELTLAFINSRMASLRQRWDRWNRKGDAVLAGTAS 60 ++FLLI YLLV+ AMWLLLFPSGR TL F+ +R + LR RW+R+N +GD ++A S Sbjct: 1 MVFLLIATYLLVSGLAMWLLLFPSGRAQTLRFLQTRCSRLRNRWERYNDRGDQMIAEVTS 60 Query: 61 GIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVANAQIAEL 120 IR S ++ + YVR NY+++ +++ LLIGPAI+A +L+GKSML GF+ R N+QIAEL Sbjct: 61 NIRSSLTSRLNYVRKNYLVLSIIVALLIGPAIVALLLAGKSMLQGFDDTQRATNSQIAEL 120 Query: 121 LKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIMKEKYGI 180 LKGE LV PPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIMKEK+G Sbjct: 121 LKGEQLVAPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIMKEKHGY 180 Query: 181 EMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM 240 EMALIEGYRSP+RQNMLAGMGG +TNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM Sbjct: 181 EMALIEGYRSPQRQNMLAGMGGGITNAAAFQSYHQYGLAGDCAFVRNGKLVISEKDPWAM 240 Query: 241 EAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPGVMKK 279 YR YGEVAESVGLTWGGRWKLMDFGHTEYR+PGVMKK Sbjct: 241 AGYRLYGEVAESVGLTWGGRWKLMDFGHTEYRMPGVMKK 279 >B1YSB6.1 B1YSB6_BURA4 Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Length = 281 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 138/244 (56%), Positives = 174/244 (71%), Gaps = 8/244 (3%) Query: 39 SLRQRWDRWNRKGDAVLAGTASGIRHSFSASIGYVRG-NYVIVGLVLLLLIG------PA 91 S+ Q R R+ + A T S I S +A+ G + G ++V L++++ P Sbjct: 32 SVAQFHGRMTRRANDRAARTRSQIVKSATATRGALSGVQNLLVRRRLMIMVSAGILATPP 91 Query: 92 ILAFMLSGKSMLGGFEPADRVANAQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVD 151 ++A L G+ + ++ RV + +IA LL+GE LVPPPPLPP++F T EV QVRP L D Sbjct: 92 LVAIALRGRQLFQ-YDDTARVPDEKIAALLQGEQLVPPPPLPPEVFATKEVEQVRPALKD 150 Query: 152 ASRNWQLLNPEYAQRLLLVFKIMKEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQ 211 ASR+W LL+P++ RLLLV+KIM E+YG EMAL+EGYRSPERQN LA MG NVTNAAAFQ Sbjct: 151 ASRDWNLLDPDFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAFQ 210 Query: 212 SYHQYGLAGDCAFVRNGKLVISEKDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEY 271 SYHQ+GLA D AF+R+GKLVISEKDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY Sbjct: 211 SYHQFGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEQVGLTWGGRWKMMDLGHVEY 270 Query: 272 RLPG 275 PG Sbjct: 271 HKPG 274 >B1FRE9.1 B1FRE9_9BURK Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Length = 281 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 137/244 (56%), Positives = 173/244 (70%), Gaps = 8/244 (3%) Query: 39 SLRQRWDRWNRKGDAVLAGTASGIRHSFSASIGYVRG-NYVIVGLVLLLLIG------PA 91 S+ Q R R+ + A T S I S + + G + G ++V L++++ P Sbjct: 32 SVAQFHGRMTRRANDRAARTRSQIVKSATVTRGALSGVQNLLVRRRLMIMVSAGILATPP 91 Query: 92 ILAFMLSGKSMLGGFEPADRVANAQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVD 151 ++A L G+ + ++ RV + +IA LL+GE LVPPPPLPP++F T EV QVRP L D Sbjct: 92 LVAIALRGRQLFQ-YDDTARVPDEKIAALLQGEQLVPPPPLPPEVFATKEVEQVRPALKD 150 Query: 152 ASRNWQLLNPEYAQRLLLVFKIMKEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQ 211 ASR+W LL+P++ RLLLV+KIM E+YG EMAL+EGYRSPERQN LA MG NVTNAAAFQ Sbjct: 151 ASRDWNLLDPDFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAFQ 210 Query: 212 SYHQYGLAGDCAFVRNGKLVISEKDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEY 271 SYHQ+GLA D AF+R+GKLVISEKDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY Sbjct: 211 SYHQFGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEQVGLTWGGRWKMMDLGHVEY 270 Query: 272 RLPG 275 PG Sbjct: 271 HKPG 274 >B1TG78.1 B1TG78_9BURK Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Length = 281 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 137/244 (56%), Positives = 173/244 (70%), Gaps = 8/244 (3%) Query: 39 SLRQRWDRWNRKGDAVLAGTASGIRHSFSASIGYVRG-NYVIVGLVLLLLIG------PA 91 S+ Q R R+ + A T S I S + + G + G ++V L++++ P Sbjct: 32 SVAQFHGRLTRRANDRAARTRSQIVKSATVTRGALSGVQNLLVRRRLMIMVSAGILATPP 91 Query: 92 ILAFMLSGKSMLGGFEPADRVANAQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVD 151 ++A L G+ + ++ RV + +IA LL+GE LVPPPPLPP++F T EV QVRP L D Sbjct: 92 LVAIALRGRQLFQ-YDDTARVPDEKIAALLQGEQLVPPPPLPPEVFATKEVEQVRPALKD 150 Query: 152 ASRNWQLLNPEYAQRLLLVFKIMKEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQ 211 ASR+W LL+P++ RLLLV+KIM E+YG EMAL+EGYRSPERQN LA MG NVTNAAAFQ Sbjct: 151 ASRDWNLLDPDFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAFQ 210 Query: 212 SYHQYGLAGDCAFVRNGKLVISEKDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEY 271 SYHQ+GLA D AF+R+GKLVISEKDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY Sbjct: 211 SYHQFGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEQVGLTWGGRWKMMDLGHVEY 270 Query: 272 RLPG 275 PG Sbjct: 271 HKPG 274 >Q0BIS0.1 Q0BIS0_BURCM Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins Length = 242 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 135/235 (57%), Positives = 170/235 (72%), Gaps = 8/235 (3%) Query: 48 NRKGDAVLAGTASGIRHSFSASIGYVRG-NYVIVGLVLLLLIG------PAILAFMLSGK 100 R+ + A T S I S +A+ G + G ++V L++++ P ++A L G+ Sbjct: 2 TRRANDRAARTRSQIVKSATATRGALSGVQNLLVRRRLMIMVSAGILATPPLVAIALRGR 61 Query: 101 SMLGGFEPADRVANAQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLN 160 + ++ RV + +IA LL+GE LVPPPPLPP++F T EV QVRP L DASR+W LL+ Sbjct: 62 QLFQ-YDDTARVPDEKIAALLQGEQLVPPPPLPPEVFATKEVEQVRPALKDASRDWNLLD 120 Query: 161 PEYAQRLLLVFKIMKEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAG 220 P++ RLLLV+KIM E+YG EMAL+EGYRSPERQN LA MG NVTNAAAFQSYHQ+GLA Sbjct: 121 PDFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAFQSYHQFGLAT 180 Query: 221 DCAFVRNGKLVISEKDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPG 275 D AF+R+GKLVISEKDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY PG Sbjct: 181 DNAFLRDGKLVISEKDPWAMRGYQLYGQVAEQVGLTWGGRWKMMDLGHVEYHKPG 235 >A3MQY5.1 A3MQY5_BURM7 Serine-type D-Ala-D-Ala carboxypeptidase Length = 283 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/221 (58%), Positives = 160/221 (72%), Gaps = 1/221 (0%) Query: 55 LAGTASGIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVAN 114 LA +A R + S + +++ +L P ++A L G+ + ++ RV + Sbjct: 55 LAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQ-YDDTLRVPD 113 Query: 115 AQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIM 174 +IA LLKGE LVPP PLPP++F T EV QVRP L DASR+W LL+ ++ RLLLV+KIM Sbjct: 114 EKIAALLKGEQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIM 173 Query: 175 KEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISE 234 +E++G EMAL+EGYRSPERQN LA MG NVTNAAAFQSYHQYGLA D AF+R+GKLVISE Sbjct: 174 REQHGYEMALLEGYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAADNAFLRDGKLVISE 233 Query: 235 KDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPG 275 KDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY PG Sbjct: 234 KDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPG 274 >A2S6Y0.1 A2S6Y0_BURM9 Serine-type D-Ala-D-Ala carboxypeptidase Length = 283 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/221 (58%), Positives = 160/221 (72%), Gaps = 1/221 (0%) Query: 55 LAGTASGIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVAN 114 LA +A R + S + +++ +L P ++A L G+ + ++ RV + Sbjct: 55 LAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQ-YDDTLRVPD 113 Query: 115 AQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIM 174 +IA LLKGE LVPP PLPP++F T EV QVRP L DASR+W LL+ ++ RLLLV+KIM Sbjct: 114 EKIAALLKGEQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIM 173 Query: 175 KEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISE 234 +E++G EMAL+EGYRSPERQN LA MG NVTNAAAFQSYHQYGLA D AF+R+GKLVISE Sbjct: 174 REQHGYEMALLEGYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAADNAFLRDGKLVISE 233 Query: 235 KDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPG 275 KDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY PG Sbjct: 234 KDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPG 274 >A1UZJ7.1 A1UZJ7_BURMS D-alanyl-D-alanine carboxypeptidase family protein Length = 283 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/221 (58%), Positives = 160/221 (72%), Gaps = 1/221 (0%) Query: 55 LAGTASGIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVAN 114 LA +A R + S + +++ +L P ++A L G+ + ++ RV + Sbjct: 55 LAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQ-YDDTLRVPD 113 Query: 115 AQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIM 174 +IA LLKGE LVPP PLPP++F T EV QVRP L DASR+W LL+ ++ RLLLV+KIM Sbjct: 114 EKIAALLKGEQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIM 173 Query: 175 KEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISE 234 +E++G EMAL+EGYRSPERQN LA MG NVTNAAAFQSYHQYGLA D AF+R+GKLVISE Sbjct: 174 REQHGYEMALLEGYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAADNAFLRDGKLVISE 233 Query: 235 KDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPG 275 KDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY PG Sbjct: 234 KDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPG 274 >C5NEM2.1 C5NEM2_BURMA D-alanyl-D-alanine carboxypeptidase family protein Length = 283 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/221 (58%), Positives = 160/221 (72%), Gaps = 1/221 (0%) Query: 55 LAGTASGIRHSFSASIGYVRGNYVIVGLVLLLLIGPAILAFMLSGKSMLGGFEPADRVAN 114 LA +A R + S + +++ +L P ++A L G+ + ++ RV + Sbjct: 55 LAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQ-YDDTLRVPD 113 Query: 115 AQIAELLKGELLVPPPPLPPDMFTTAEVVQVRPMLVDASRNWQLLNPEYAQRLLLVFKIM 174 +IA LLKGE LVPP PLPP++F T EV QVRP L DASR+W LL+ ++ RLLLV+KIM Sbjct: 114 EKIAALLKGEQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIM 173 Query: 175 KEKYGIEMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGDCAFVRNGKLVISE 234 +E++G EMAL+EGYRSPERQN LA MG NVTNAAAFQSYHQYGLA D AF+R+GKLVISE Sbjct: 174 REQHGYEMALLEGYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAADNAFLRDGKLVISE 233 Query: 235 KDPWAMEAYRHYGEVAESVGLTWGGRWKLMDFGHTEYRLPG 275 KDPWAM Y+ YG+VAE VGLTWGGRWK+MD GH EY PG Sbjct: 234 KDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPG 274