BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0268.p (941 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZE7.1 D8IZE7_HERSS VGR-related type VI secretion system protein 1789 0.0 B3R9Q4.1 B3R9Q4_CUPTR Putative uncharacterized protein 758 0.0 E2T3X4.1 E2T3X4_9RALS Rhs element Vgr protein 731 0.0 E5U0J6.1 E5U0J6_ALCXX VgrG protein 730 0.0 E6VAD8.1 E6VAD8_VARPD Type VI secretion system Vgr family protein 725 0.0 Q47E23.1 Q47E23_DECAR Rhs element Vgr protein 723 0.0 E6VA90.1 E6VA90_VARPD Type VI secretion system Vgr family protein 719 0.0 D8NHJ5.1 D8NHJ5_RALSO Putative Rhs element VGR-related protein 717 0.0 Q8XRT1.1 Q8XRT1_RALSO Putative vgr-related protein 712 0.0 D8N3A6.1 D8N3A6_RALSO Putative Rhs element VGR-related protein 708 0.0 >D8IZE7.1 D8IZE7_HERSS VGR-related type VI secretion system protein Length = 944 Score = 1789 bits (4634), Expect = 0.0, Method: Compositional matrix adjust. Identities = 924/944 (97%), Positives = 929/944 (98%), Gaps = 3/944 (0%) Query: 1 MNLSDLAALFGAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIA 60 MNLSDL ALFGAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIA Sbjct: 1 MNLSDLPALFGAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIA 60 Query: 61 GYRLQLSCLSLNADISLRKLLGQPVLLELDTDGGARAFHGHVTACRMEGANGGMARYLLT 120 GYRLQLSCLSLNADISLRKLLGQPVLLELDTDGGARAFHGHVTACRMEGANGGMARYLLT Sbjct: 61 GYRLQLSCLSLNADISLRKLLGQPVLLELDTDGGARAFHGHVTACRMEGANGGMARYLLT 120 Query: 121 IEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLAT 180 IEPWLSFLRHRRDSAVFQDMSAP IIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLAT Sbjct: 121 IEPWLSFLRHRRDSAVFQDMSAPAIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLAT 180 Query: 181 QYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFAQ 240 QYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFAQ Sbjct: 181 QYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFAQ 240 Query: 241 TNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGENAHDKLVLTSRDAP 300 TNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQ AVRAASTASSGENAHDKLVLTSRDAP Sbjct: 241 TNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQTAVRAASTASSGENAHDKLVLTSRDAP 300 Query: 301 GQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDDQF 360 GQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDDQF Sbjct: 301 GQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDDQF 360 Query: 361 VLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNRFE 420 VLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNRFE Sbjct: 361 VLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNRFE 420 Query: 421 AIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHWQRGE 480 AIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVG QGQAVHTDRDNRIRVQFHWQRGE Sbjct: 421 AIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGAQGQAVHTDRDNRIRVQFHWQRGE 480 Query: 481 RSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIEG 540 RSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIEG Sbjct: 481 RSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIEG 540 Query: 541 DIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSSGAHNHAAVLSGIKTQA 600 DIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSSGAHNHAAVLSGIKTQA Sbjct: 541 DIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSSGAHNHAAVLSGIKTQA 600 Query: 601 LSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLAATGQG 660 LSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLA TGQG Sbjct: 601 LSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLATTGQG 660 Query: 661 FELKTLYSAALRAGQGLLVSTEKSISAQLDMTQGLSQLSESAQKQQQLAETAQKHNARLE 720 FELKTLYSAALRAGQGLLVSTEKSISAQLDMTQGLSQLSESAQKQQQLAETAQKHNARLE Sbjct: 661 FELKTLYSAALRAGQGLLVSTEKSISAQLDMTQGLSQLSESAQKQQQLAETAQKHNARLE 720 Query: 721 GESDAAKLPAVEAMGESIEVLKATQ---SASTGSSGSDGQGSSATTAFSAPQLQLSSPAG 777 GESDAAKLPAVEAMGESIEVLKATQ + S+GS G ++ATTAFSAPQLQLSSPAG Sbjct: 721 GESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDGQGSSATTATTAFSAPQLQLSSPAG 780 Query: 778 IAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPNQETG 837 IAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPNQETG Sbjct: 781 IAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPNQETG 840 Query: 838 MALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWLRLEGGNI 897 MALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGK+HVQLAAQGAWLRLEGGNI Sbjct: 841 MALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKQHVQLAAQGAWLRLEGGNI 900 Query: 898 EVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYKSGA 941 EVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYKSGA Sbjct: 901 EVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYKSGA 944 >B3R9Q4.1 B3R9Q4_CUPTR Putative uncharacterized protein Length = 932 Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/961 (46%), Positives = 579/961 (60%), Gaps = 73/961 (7%) Query: 4 SDLAALFGA-WSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGY 62 +DLA L GA +SQ+ R++RL TPL D ALM E+LQA EQ+ G G+ Sbjct: 5 TDLAKLLGAAFSQANRLLRLQTPLGHD----ALMPEQLQAAEQLDGG-----------GF 49 Query: 63 RLQLSCLSLNADISLRKLLGQPVLLELDTDGG---ARAFHGHVTACRMEGANGGMARYLL 119 R+ L+ +S NA I + LLGQ V ++L T R FHGHVT GANGG+ARY + Sbjct: 50 RIDLTAVSDNAGIEAQSLLGQAVRIDLLTQRSRTTLRPFHGHVTRFERVGANGGLARYRI 109 Query: 120 TIEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLA 179 +EPWL+ LRHRRDS +FQDMS ++++VF DY GQG+L PAWR L+DASAY +RS+ Sbjct: 110 VVEPWLALLRHRRDSFLFQDMSVVDVVDSVFGDYNGQGKLVPAWRWALRDASAYPRRSIV 169 Query: 180 TQYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFA 239 TQY+E+D FVTRL+ EEGLFYY EH+ ++ +LG+H +VIAD N F+ N ++++ F Sbjct: 170 TQYEESDFDFVTRLLAEEGLFYYFEHEA-ADGEALGTHRMVIADANDVFQDNEQASIRFG 228 Query: 240 QTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGENAHDKLVLTSRDA 299 + +A A+D IDRW+ RR QTN V + +WDYR AVR+A + E L D Sbjct: 229 RADATAAEDVIDRWQGARRLQTNTVAVASWDYRAKAVRSAEAGAPAEGNSAAPTLQDTDY 288 Query: 300 PGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHD---GGD 356 PGQY E +QAQR A ++A+EVR F G G+VR+ P + F LTGHYD++ G D Sbjct: 289 PGQYWFEDGDQAQRHARQLVEALEVRRLSFAGEGSVRTLAPASRFMLTGHYDYERVQGDD 348 Query: 357 DDQFVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYR 416 + +FV+L V H A NNL+ + + LLG G + A P YR Sbjct: 349 ERRFVVLAVAHAARNNLNERFRGVIDQLLG---------TGQSTEAPAEDASAVDVPFYR 399 Query: 417 NRFEAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHW 476 N+F + KIPYRP +D QG +L+P+P G Q+A+V+G G VHTDRD+R+ VQFHW Sbjct: 400 NQFTVVPAKIPYRPQQLDGQGRQLHPRPTVTGAQTAIVIGTDG-PVHTDRDHRVMVQFHW 458 Query: 477 QRGERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLID 536 QRG RS S LS P DD+ A A GTWVRV P AGANWGG A+PRVGQEV+++ Sbjct: 459 QRGARSASRLSHPAGDDNARAEAG--LGTWVRV---ATPVAGANWGGVALPRVGQEVVVE 513 Query: 537 FIEGDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSSG----------- 585 F GDIDRPVVIG YNGRG +AQ NQ GA +ATGNAPAWF GS+ Sbjct: 514 FQHGDIDRPVVIGAAYNGRGQASAQYNQNQTGAANATGNAPAWFAGSNETADGKQDGNGK 573 Query: 586 -----AHNHAAVLSGIKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASEL 640 H H AVLSGIKTQAL SQ G GGYNQLVFDD+ GQ+R L AS L Sbjct: 574 PDGQQGHVHNAVLSGIKTQALGHSQDGTGGYNQLVFDDTSGQSRTLL----STTQAASAL 629 Query: 641 NLGLLRQQTDNQRLAATGQGFELKTLYSAALRAGQGLLVSTEKSISA--QLDMTQGLSQL 698 LG Q DN R AA G G L+T S ALR G G+L++ + ++ LD +Q+ Sbjct: 630 TLGHHLDQRDNARQAALGHGAALETADSGALRGGAGMLLTAHGAGTSVPLLDSEGAATQV 689 Query: 699 SESAQKQQQLAETAQKHNARLEGESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDGQG 758 S + LA+ A+K A L E A+LPA+ + + EVL+ T+ G+DG+ Sbjct: 690 EASTELLTSLADVARKQKADLPDEPAPAELPAIAQLKHTTEVLRHTE------EGADGKA 743 Query: 759 SSATTAFSAPQLQLSSPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGI 818 S+ TA++ P LQ+S+P GIAA TPA A++ AG +V A KD N A GNL G+ Sbjct: 744 SA--TAYNEPHLQVSAPKGIAATTPADAVLVAGTQLTVAAQKDANVAAGGNLSVAVADGL 801 Query: 819 SLFTYGKASNGSKPNQETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGK 878 SLFT+GKA + S G+A+HAA+GKV V S GQ + + K++TV+S V+V K Sbjct: 802 SLFTHGKAGDESA----AGIAMHAASGKVGVASLQGQGRIAAEKRVTVSSSQGAVNVQAK 857 Query: 879 EHVQLAAQGAWLRLEGGNIEVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYK 938 EHV L A GA +R+ G IEVH PG F+ + GP ++ S+P G L CEY+ Sbjct: 858 EHVLLNAAGAQIRVLGNTIEVHAPGMTTFKGAQHLFVGPGGREANTSLP-KGELPLCEYQ 916 Query: 939 S 939 + Sbjct: 917 A 917 >E2T3X4.1 E2T3X4_9RALS Rhs element Vgr protein Length = 919 Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/942 (46%), Positives = 572/942 (60%), Gaps = 54/942 (5%) Query: 4 SDLAALFGA-WSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGY 62 ++LA L A +SQ+ R++RL TPL GP+AL+ E++ E + G G+ Sbjct: 5 TELANLLRASFSQADRLLRLETPL----GPNALLPEKVNVAEHIDAG-----------GF 49 Query: 63 RLQLSCLSLNADISLRKLLGQPVLLELDTD---GGARAFHGHVTACRMEGANGGMARYLL 119 R++L+ LS NADI KLLGQPV L+L T R FHGHVT GANGG+ RY L Sbjct: 50 RVELTALSDNADIDSAKLLGQPVRLDLLTQQSRSALRPFHGHVTRFEQVGANGGLVRYRL 109 Query: 120 TIEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLA 179 IEPWL+FLRHR+DS +FQDMS +I+++F DY+GQGRL PAWR L+D++ Y +RS+ Sbjct: 110 VIEPWLAFLRHRQDSFLFQDMSVIEVIDSLFGDYQGQGRLVPAWRWALRDSAVYTRRSVI 169 Query: 180 TQYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFA 239 TQY E+D FVTRL+ EEGLFY+ EH+ A LG H +VIAD N F NA++++ F Sbjct: 170 TQYDESDFDFVTRLLAEEGLFYFFEHEAKDGDA-LGVHRMVIADSNDVFADNAQASIRFG 228 Query: 240 QTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAAST-ASSGENAHDKLVLTSRD 298 + +A +D IDRW+ RRWQTNAV I +WDYR A R A A N +L L D Sbjct: 229 RADATATEDVIDRWQGARRWQTNAVSIASWDYRANAKRTAQLGAQQQSNDGPQLTLQDTD 288 Query: 299 APGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDD 358 PGQY E QAQR A M+A+E+R+K F G GT R+ GT F L H+DHD G + Sbjct: 289 YPGQYWFEDNNQAQRVARLMMEALELRDKQFDGEGTARTLATGTRFQLLDHFDHDDG-EQ 347 Query: 359 QFVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNR 418 +F +L V HQA NN + +T LG + D L+ + R A A P YRN Sbjct: 348 RFAVLAVTHQARNNFNDRFGQVLTETLGALRGGD-----VLVAGSNRGAGDDA-PFYRNH 401 Query: 419 FEAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHWQR 478 F +R+ +P RP D QG L+P+P +G Q+A+VVG +G VHTDRD+RI+VQFHWQR Sbjct: 402 FTVVRDNVPVRPQQSDEQGRALHPRPTVNGSQTALVVGAEG-PVHTDRDHRIKVQFHWQR 460 Query: 479 GERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFI 538 G RS S S P DD+ A A G WVRV AP AG NWGG A+PRVGQEVL++F+ Sbjct: 461 GARSASRQSHPAGDDNARASAG--LGAWVRV---TAPVAGPNWGGVALPRVGQEVLVEFL 515 Query: 539 EGDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSS---GAHNHAAVLSG 595 +GDIDRPVV+G YNG G +AQ NQ GA ATGNAPAWF G S GA+ H AVLSG Sbjct: 516 QGDIDRPVVVGAAYNGSGQTDAQYNQNQAGAAGATGNAPAWFAGDSKSQGAYAHNAVLSG 575 Query: 596 IKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLA 655 IKTQAL+ SQSG GYNQLVFDDS GQ R L AS L LG ++Q D+ R A Sbjct: 576 IKTQALAGSQSGSSGYNQLVFDDSEGQGRTQLS----TTQAASGLVLGHHKEQIDSARQA 631 Query: 656 ATGQGFELKTLYSAALRAGQGLLVSTEK-SISAQL-DMTQGLSQLSESAQKQQQLAETAQ 713 G G L T S A+RAG GLL++ S SA L D SQ+ ++ + LA+ AQ Sbjct: 632 DLGHGAALATDDSGAVRAGAGLLLTAHSASTSASLQDSEAAASQIEAASDLAESLADAAQ 691 Query: 714 KHNARLEGESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDGQGSSATTAFSAPQLQLS 773 K A L E A +LPA++ + + EVL+ +SA G+G+ A A+S P LQ+S Sbjct: 692 KQKAGLADERAAKELPALKQLRHTTEVLRHAESA--------GEGAQA-VAYSEPHLQVS 742 Query: 774 SPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPN 833 +P GI TPA A++ AG +++ A +D N A GNL G+SL+ +GK S G + Sbjct: 743 APKGIVTTTPADAVLVAGTQATLIAKQDANVAAGGNLSVAVAEGLSLYAHGK-SLGQAGD 801 Query: 834 QETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWLRLE 893 G+A+HAA+GKV + S G+T L + K +TVAS +V+ K+HV + A GA +++ Sbjct: 802 ATPGIAMHAASGKVGLSSLKGETHLVAEKAVTVASTQGNVTAEAKQHVLVNAAGAQIKVT 861 Query: 894 GGNIEVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADC 935 G IE+H PG + F+ + GP +G S+ A G L C Sbjct: 862 NGTIELHAPGMVTFKGAGHRFVGPGGAGGDNSL-AQGKLKGC 902 >E5U0J6.1 E5U0J6_ALCXX VgrG protein Length = 897 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/933 (44%), Positives = 563/933 (60%), Gaps = 72/933 (7%) Query: 14 SQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGYRLQLSCLSLNA 73 +Q+ R++ L TPL G + L+AE L A EQ+ G YRL+++ LS +A Sbjct: 17 AQANRLLDLRTPL----GENRLVAETLSATEQLSGG-----------AYRLEITALSDDA 61 Query: 74 DISLRKLLGQPVLLELDT---DGGARAFHGHVTACRMEGANGGMARYLLTIEPWLSFLRH 130 I L+ L+GQPV L L T R +HGH TA R GANGG+ARY LT+EPWL+FLR Sbjct: 62 HIPLKALMGQPVTLRLQTALDREQPRLWHGHATAVRFLGANGGLARYGLTVEPWLAFLRA 121 Query: 131 RRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLATQYQETDLAFV 190 RRDS +QD + I++++F DY+GQG L P WR +++D +AYAKRSLA QY+ETD AFV Sbjct: 122 RRDSFAYQDKTVIDIVDSIFGDYKGQGALAPQWRWEVKDRAAYAKRSLAIQYRETDYAFV 181 Query: 191 TRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFAQTNAVMAQDNI 250 RL+ EEGLFY++EH D HT+VIADHNG+FKP +++V FA+ + +D+I Sbjct: 182 ERLLAEEGLFYWVEHADD-------GHTLVIADHNGAFKPGPQASVRFARADVTETEDSI 234 Query: 251 DRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGENAHDKLVLTSRDAPGQYINESPEQ 310 RW +RWQTNAV + +WDYR A R S + + + L S D PGQY E Q Sbjct: 235 QRWSPRQRWQTNAVRMASWDYRSAQARPVSAQADAGKLANAIELVSDDYPGQYAYEDSAQ 294 Query: 311 AQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDDQFVLLRVVHQAH 370 +R A N + A+ VR + GAGTVR+ PG F LTGHY G FV++ + HQA Sbjct: 295 GERLAHNALAALRVRQQSIEGAGTVRTLAPGQRFELTGHYQQGGA--SAFVVIAITHQAR 352 Query: 371 NNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNRFEAIRNKIPYRP 430 NN ADL V+ LG DD D YRN F I + +RP Sbjct: 353 NNFDADLGRAVSEALGGGDSDDAD-------------------FYRNAFTCIGSDTEFRP 393 Query: 431 LLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHWQRGERSHSGLSSPT 490 D G RL+P+P G Q+A+V+G + + VHTDRD+RI+VQFHWQRG+ S S ++ P+ Sbjct: 394 ATQDGHGVRLHPRPTVFGAQTALVIGAE-EPVHTDRDHRIKVQFHWQRGKASSSRMAHPS 452 Query: 491 PDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIEGDIDRPVVIGT 550 D++ APA ++ G WVRV P AG +WGG VPRVGQEVL++F+ GDIDRPVV+G Sbjct: 453 GDEN--APAKDELGAWVRV---AEPVAGGDWGGHFVPRVGQEVLVEFLHGDIDRPVVVGA 507 Query: 551 LYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSSGAHNHAAVLSGIKTQALSASQSGGGG 610 LYNG G ++A N+ G +ATGNAPAWF G++ H H AV+SG KTQAL++S +G GG Sbjct: 508 LYNGEGAEDASHNKVQAGGANATGNAPAWFAGANEGHAHNAVMSGFKTQALASSGAGTGG 567 Query: 611 YNQLVFDDSPGQAR-AALQQHADAHDGASELNLGLLRQQTDNQRLAATGQGFELKTLYSA 669 YNQLV DD+PGQ+R A ADA LNLG ++QQ DN+RL G G EL T + Sbjct: 568 YNQLVQDDTPGQSRLTASTTQADA-----RLNLGHVKQQRDNERLQDLGHGAELSTKEAV 622 Query: 670 ALRAGQGLLVSTEKSISAQ---LDMTQGLSQLSESAQKQQQLAETAQKHNARLEGESDAA 726 ALR G GLL+S + +A+ LD + Q+ + + ++LA+ A + A L+G+ A Sbjct: 623 ALRGGSGLLLSADLRENAEGPLLDSAEASKQIEAALEAARELADVAVRQKAILDGDPQA- 681 Query: 727 KLPAVEAMGESIEVLKATQSASTGSSGSDGQGSSA-TTAFSAPQLQLSSPAGIAAVTPAS 785 LPA E + +EV++ATQ + QG++ A+S P +Q+S+P+GI TPA+ Sbjct: 682 -LPAQEGLQHILEVVEATQ------DDPNPQGAAVKVAAYSEPHIQVSAPSGIGQYTPAN 734 Query: 786 AIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPNQETGMALHAAAG 845 A + AG T + A D+N + +L G LFT G A+ G +P ++ G+ LHAA G Sbjct: 735 AFLVAGATFAQIA-PDVNWASSAHLAVGVAGGALLFTAGHAAGGGRPVKDAGLRLHAAGG 793 Query: 846 KVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWLRLEGGNIEVHGPGAM 905 K+ + SQ + L++ K +T AS G +V V GK V A GA+LRLEGG I++H PG + Sbjct: 794 KLRLHSQDARMTLSAEKAVTFASAGANVLVEGKRRVLATAAGAYLRLEGGGIQLHAPGKV 853 Query: 906 EFRASAKELTGPASSGSSASVPAPGPLADCEYK 938 E +A A GP ++ + + P+ G DC K Sbjct: 854 ELKAGAHSWVGPQTASGNLAPPS-GEFKDCPSK 885 >E6VAD8.1 E6VAD8_VARPD Type VI secretion system Vgr family protein Length = 942 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/962 (44%), Positives = 562/962 (58%), Gaps = 74/962 (7%) Query: 14 SQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGYRLQLSCLSLNA 73 +Q R++ LHTPL G + L+AER VE + G G+R +L+ LS +A Sbjct: 18 TQQDRLLVLHTPL----GANKLLAERFDGVESLDDG-----------GFRFELTALSDDA 62 Query: 74 DISLRKLLGQPVLLELDTDGGA---RAFHGHVTACRMEGANGGMARYLLTIEPWLSFLRH 130 I L+ L+GQ V L+L T R FHG+VT +NGGMARY + IEPWL+FLR Sbjct: 63 HIELKTLMGQGVRLDLQTAQSRTELRPFHGYVTEAECVASNGGMARYRIVIEPWLAFLRL 122 Query: 131 RRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLATQYQETDLAFV 190 R+DS +FQ S I++AVF Y+ QG+L WR ++ Y R + TQY E+D FV Sbjct: 123 RQDSCLFQHQSVFDIVDAVFTRYQSQGKLAVQWRWEIAQRDIYPVRGITTQYHESDFDFV 182 Query: 191 TRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFAQTNAVMAQDNI 250 RL+ EEGL Y+ EH LGSHT+VIADHNG+F+ N ++T+ F + +A +D I Sbjct: 183 ARLLAEEGLCYWFEH-ATGKDGDLGSHTLVIADHNGAFRANTQATIRFHRADASEREDTI 241 Query: 251 DRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGENAHDKLVLTSRDAPGQYINESPEQ 310 +WR R+ QTN++ +WDY+ + R S G L D PG Y E+ Q Sbjct: 242 QQWRGSRQLQTNSLAQQSWDYKSVSARPVQQQSRGAG---HRTLQWSDDPGAYGWETSAQ 298 Query: 311 AQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGH--YDHDGGDDDQFVLLRVVHQ 368 +R N +QA+E+RNK F G VRS P TTFTL+GH +D DG +D +F +L V H Sbjct: 299 GERLLSNALQALELRNKRFEGQSAVRSLAPATTFTLSGHEQHDKDGEEDRRFAVLAVRHI 358 Query: 369 AHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARP----VYRNRFEAIRN 424 A NN LKAGV LG + ++ D + S + A+P YRN F +R Sbjct: 359 ARNNFDEALKAGVGDRLGLPDI------AAVFDASEDSGNAAAKPDTVTHYRNDFTTVRA 412 Query: 425 KIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGV-QGQAVHTDRDNRIRVQFHWQRGERSH 483 IPYRPL +D G+R++PKP HG QSA+V+GV + VHTDRD+R++VQFHWQRG S Sbjct: 413 AIPYRPLSMDGHGQRIHPKPSVHGSQSAIVIGVGENAPVHTDRDHRVKVQFHWQRG--SG 470 Query: 484 SGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIEGDID 543 S P PD APA ++ G WVRV A AG NWG +PRVGQEVL++F GDID Sbjct: 471 SSARQPRPDGQDNAPAADRLGAWVRVAAS---AAGDNWGQVTLPRVGQEVLVEFHHGDID 527 Query: 544 RPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPG---SSGAHNHAAVLSGIKTQA 600 RPVV+ LYNG G +AQ N+ GA +TGNAPAWF G + H H AV SGIKTQ Sbjct: 528 RPVVVAALYNGAGQIDAQHNEKSAGAAQSTGNAPAWFAGEGKEAKEHAHNAVFSGIKTQE 587 Query: 601 LSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLAATGQG 660 LSASQSG GGYNQLVFDD+PGQ +L S L+LG +QQ DN R A G G Sbjct: 588 LSASQSGDGGYNQLVFDDTPGQGSTSLA----TTQAMSRLHLGHHKQQDDNARGKARGHG 643 Query: 661 FELKTLYSAALRAGQGLLVSTEKSISAQLDMTQGLSQLSESAQKQQQ--------LAETA 712 EL T A+RAG GLLVS +A +G S AQ+Q + LA++A Sbjct: 644 AELATTAQGAIRAGSGLLVSAHAQQNA-----KGAFMASREAQQQTKQAEELATSLAKSA 698 Query: 713 QKHNARLEGESDAAKLPAVEAMGESIEVLKATQ--SASTGSSGSDGQ------GSSATTA 764 Q A+L+GE KLPA+EA+ EVL ATQ ++++G +GS G G + TA Sbjct: 699 QTQKAQLKGEEAPDKLPAIEALKHVAEVLGATQEGASASGVNGSGGDIKATEGGQGSVTA 758 Query: 765 FSAPQLQLSSPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYG 824 +S P LQ S+P GI VTP AI +G +++ A +DI+ AQG + G+SL+T G Sbjct: 759 YSEPHLQFSAPMGIGFVTPKEAIAVSGKNTAIVANQDIDLPAQGQIAVSVAKGVSLYTVG 818 Query: 825 -KASNGSKPNQETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQL 883 KA G +PNQE G+ALHAA+G V++QSQ G T + + K++T+AS K+V V +HV L Sbjct: 819 AKAGEGGEPNQERGIALHAASGSVTLQSQKGATKIAADKKVTIASTTKNVDVEAPKHVLL 878 Query: 884 AAQGAWLRLEGGNIEVHGPGAMEFRASAKELTGP----ASSGSSASVPAPGPLADCEYKS 939 + GA+++LEG +I++H PG + FR GP +S+ S S P P D S Sbjct: 879 TSAGAYIKLEGSSIKIHAPGKVTFRG-MHNFVGPQGDSSSNALSGSDQQPCPKQDDAAAS 937 Query: 940 GA 941 GA Sbjct: 938 GA 939 >Q47E23.1 Q47E23_DECAR Rhs element Vgr protein Length = 933 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/938 (44%), Positives = 565/938 (60%), Gaps = 60/938 (6%) Query: 5 DLAALFGAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGYRL 64 DL + AW Q+ R++ L TP GP AL+AE E +GP + AGYR+ Sbjct: 8 DLISGGAAWRQTDRLLTLTTP----AGPDALLAETASIDEALGPVAEH-------AGYRI 56 Query: 65 QLSCLSLNADISLRKLLGQPVLLELDTDG---GARAFHGHVTACRMEGANGGMARYLLTI 121 QL+ L+ NA+ SL LLGQP L+L T R FHGH+T GANGG ARY L I Sbjct: 57 QLTVLTANAEQSLTALLGQPARLDLQTSALRTVRRPFHGHITQVTRLGANGGFARYKLII 116 Query: 122 EPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLATQ 181 EPWL+FL H +D+ +FQD S II+ + D++ QG+L P WR L D +AY KR + Q Sbjct: 117 EPWLAFLGHNQDNYLFQDKSVIEIIDELLGDWKSQGKLVPDWRWVLADTAAYPKRGMTVQ 176 Query: 182 YQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFAQT 241 Y+E+DLAF+ RL+ EEGLF + EHQ + +LG HT++IADHNG+F N + + F Q Sbjct: 177 YRESDLAFLKRLLAEEGLFCWFEHQAEEGD-TLGKHTLIIADHNGAFTDNTQPRIRFTQA 235 Query: 242 NAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGENAHDKLVLTSRDAPG 301 A +++D++DRW +R+ T +WDYR + R SS ++ D PG Sbjct: 236 GATLSEDSLDRWHGLRQLDTVETNASSWDYRSLSTRPQGARSSIDSGSLPKTAAWHD-PG 294 Query: 302 QYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHD--GGDDDQ 359 QY ++ +R NQ QAI+ R K F G GTVRS PGTTF L H +HD + + Sbjct: 295 QYAWQNSAHGERMLGNQRQAIDARMKQFDGQGTVRSAAPGTTFRLADHPEHDLDAPEQRK 354 Query: 360 FVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNRF 419 F++ V HQA NNL V G+ Q Q+ +YRN+ Sbjct: 355 FLITAVSHQARNNLDET----VNGEQGREQ-----------------GSEQSVDLYRNQI 393 Query: 420 EAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHWQRG 479 AIR IP+RPL D+ G ++P+P +G +AVVVG GQ HTDRD R+RVQF WQRG Sbjct: 394 TAIRASIPWRPLSSDSHGRNIHPRPTINGTLTAVVVG-NGQPTHTDRDRRVRVQFPWQRG 452 Query: 480 ERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIE 539 +S PT D+ PA++ G W+RV+ P AGANWGG PR GQEVL+ F Sbjct: 453 AQSAGRSEHPTGADN--GPASDALGVWLRVMT---PVAGANWGGHMTPRPGQEVLVAFQN 507 Query: 540 GDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSSG-AHNHAAVLSGIKT 598 G+IDRP++IGT+YNG G +AQGNQ A+ NAPA+F G AH H A LSG+K+ Sbjct: 508 GNIDRPIIIGTVYNGSGNTDAQGNQQAGSTLQASANAPAFFAGKEAEAHTHNASLSGLKS 567 Query: 599 QALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLAATG 658 Q L+AS++G GGYNQLVFDD+PG++R + + S L LG L+QQ+DN R A G Sbjct: 568 QQLNASKTGQGGYNQLVFDDTPGESRIEV----STTEYQSILQLGHLKQQSDNARQADRG 623 Query: 659 QGFELKTLYSAALRAGQGLLVSTE---KSISAQLDMTQGLSQLSESAQKQQQLAETAQKH 715 G EL T ++A+RAG GLL+S + + S+ LD + ++Q ++ Q LAE A K Sbjct: 624 HGAELATQSASAIRAGNGLLISADARPNASSSHLDSREPIAQTQDAQSLTQSLAEVAAKQ 683 Query: 716 NARLEGESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDG-----QGSSATTAFSAPQL 770 NA L+G+ A KLPA EA+ +I+V+ AT + +GSD G+ A+S P++ Sbjct: 684 NAALKGDPQADKLPASEALKHAIDVMSATATQGQTQAGSDTIKATLGGTGTVPAWSEPRI 743 Query: 771 QLSSPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGS 830 Q S+PAGIA +TP + I+AAG S+ G+D N IAQG+ K GI+LFT GKA + Sbjct: 744 QYSAPAGIAQLTPQNHILAAGKHLSIATGQDTNLIAQGHHSLSVKDGIALFTVGKAKGKN 803 Query: 831 KPNQETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWL 890 KPN ETG+ LHAA+G VS+QSQ+G+T + K++T+AS +++ + K+H+ AQGA+L Sbjct: 804 KPNTETGIHLHAASGSVSLQSQSGKTTGAADKKVTIASTTGNLNASAKQHILAMAQGAYL 863 Query: 891 RLEGGNIEVHGPGAMEFRASAKELTGPASSGSSASVPA 928 ++EGGNI +H PG +E +AS K LTGP S +S ++PA Sbjct: 864 KIEGGNISLHAPGKVELKASQKNLTGPKS--ASTNLPA 899 >E6VA90.1 E6VA90_VARPD Type VI secretion system Vgr family protein Length = 947 Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/964 (43%), Positives = 562/964 (58%), Gaps = 64/964 (6%) Query: 1 MNLSDLAALFGA-WSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAI 59 N + L A+ A +Q R++ LHTPL G + L+AER++ VE + G Sbjct: 4 FNSASLGAMLRAGTTQRDRLLVLHTPL----GANKLLAERIEGVESLDDG---------- 49 Query: 60 AGYRLQLSCLSLNADISLRKLLGQPVLLELDT---DGGARAFHGHVTACRMEGANGGMAR 116 G+R +L+ LS +A+I L+ L+GQ V L+L T R FHGHVT +NGGMAR Sbjct: 50 -GFRFELTALSDDANIELKTLMGQGVRLDLQTAQSRTDLRPFHGHVTEAECVSSNGGMAR 108 Query: 117 YLLTIEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKR 176 Y + IEPWL+FLRHR+DS +FQ S I++AVFA Y+ QG+L WR ++ Y R Sbjct: 109 YRIVIEPWLAFLRHRQDSCLFQHQSVFDIVDAVFARYQSQGKLAVQWRWEIAQRDIYPVR 168 Query: 177 SLATQYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTV 236 + TQY E+D FV RL+ EEGL Y+ EH LGSHT+VIADHNG+F+ N ++T+ Sbjct: 169 GITTQYHESDFDFVARLLAEEGLCYWFEH-ATGKDGDLGSHTLVIADHNGAFRANTQATI 227 Query: 237 AFAQTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGENAHDKLVLTS 296 F + +A +D I +WR R+ QTN++ +WDY+ + R S G L Sbjct: 228 RFHRADASEREDTIQQWRGSRQLQTNSLAQQSWDYKSVSARPVQQQSRGAG---HRTLQW 284 Query: 297 RDAPGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGH--YDHDG 354 D PG Y E+ Q +R N +QA+E+RNK F G VR+ P TTFTL+GH +D D Sbjct: 285 SDDPGAYGWETSAQGERLLSNALQALELRNKRFEGQSAVRTLAPATTFTLSGHEQHDKDS 344 Query: 355 GDDDQFVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPV 414 +D +F +L V H A NN LKAGV LG + D+ +A + V Sbjct: 345 EEDRRFAVLAVRHIARNNFDEALKAGVGERLGLPDIATVFDASEDSDSDSGNAAAKPDTV 404 Query: 415 --YRNRFEAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGV-QGQAVHTDRDNRIR 471 YRN F +R PYRPL VD G+R++PKP HG QSA+V+GV + VHTDRD+R++ Sbjct: 405 THYRNDFTTVRAATPYRPLSVDGHGQRIHPKPSVHGSQSAIVIGVGENAPVHTDRDHRVK 464 Query: 472 VQFHWQRGERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQ 531 VQFHWQRG S S P PD APA ++ G WVRV A AG NWG +PRVGQ Sbjct: 465 VQFHWQRG--SGSSARQPRPDGQDNAPAADRLGAWVRVAAS---AAGDNWGQVTLPRVGQ 519 Query: 532 EVLIDFIEGDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPG---SSGAHN 588 EVL++F GDIDRPVV+ LYNG G +AQ N+ GA +TGNAPAWF G + H Sbjct: 520 EVLVEFHHGDIDRPVVVAALYNGAGQADAQHNEKSAGAAQSTGNAPAWFAGEGKEAKEHA 579 Query: 589 HAAVLSGIKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQ 648 H AV SGIKTQ LSASQSG GGYNQLVFDD+PGQ +L S L+LG +QQ Sbjct: 580 HNAVFSGIKTQELSASQSGDGGYNQLVFDDTPGQGSTSLA----TTQAMSRLHLGHHKQQ 635 Query: 649 TDNQRLAATGQGFELKTLYSAALRAGQGLLVSTEKSISAQLDMTQGLSQLSESAQKQQQ- 707 DN R A G G EL T A+R G GLLVS +A +G S AQ+Q + Sbjct: 636 DDNARGKARGHGAELATTAQGAIRTGSGLLVSAHAQQNA-----KGAFMASREAQQQTKQ 690 Query: 708 -------LAETAQKHNARLEGESDAAKLPAVEAMGESIEVLKATQ--SASTGSSGSDGQ- 757 LA +AQ A+++GE KLPA+EA+ EVL ATQ ++++G +GS G Sbjct: 691 AEELATSLANSAQTQKAQIKGEEAPDKLPAIEALKHVAEVLGATQEGASASGVNGSGGDI 750 Query: 758 -----GSSATTAFSAPQLQLSSPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHY 812 G + TA+S P LQ S+P GI VTP I +G +++ A +DI+ AQG + Sbjct: 751 KATEGGQGSVTAYSEPHLQFSAPKGIGFVTPKEVIAVSGKHTAIVANQDIDLPAQGQIAV 810 Query: 813 LSKSGISLFTYG-KASNGSKPNQETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGK 871 G+SL+T G KA G++PNQE G+ALHAA+G V++QSQ G T + + K++T+AS K Sbjct: 811 SVAKGVSLYTVGAKAGEGAEPNQERGIALHAASGSVTLQSQKGATKIAADKKVTIASTTK 870 Query: 872 DVSVAGKEHVQLAAQGAWLRLEGGNIEVHGPGAMEFRASAKELTGPASSGSSASVPAPGP 931 +V V +HV L + GA+++LEG +I++H PG + FR GP +S +P+ G Sbjct: 871 NVDVEAPKHVLLTSAGAYIKLEGSSIKIHAPGKVTFRG-MHNFVGPQGDSASNDLPS-GD 928 Query: 932 LADC 935 C Sbjct: 929 FKGC 932 >D8NHJ5.1 D8NHJ5_RALSO Putative Rhs element VGR-related protein Length = 918 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/947 (45%), Positives = 568/947 (59%), Gaps = 55/947 (5%) Query: 4 SDLAALF-GAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGY 62 ++LA L A+ Q+ R++RL TPL GP+ L+ ERL A E + G G+ Sbjct: 5 TELANLLRAAFIQANRLLRLDTPL----GPNVLLPERLDAAEHLDDG-----------GF 49 Query: 63 RLQLSCLSLNADISLRKLLGQPVLLELDTD---GGARAFHGHVTACRMEGANGGMARYLL 119 RL+L+ LS + D+ +LLGQPV L+L T R FHGHVT GANGG+ RY L Sbjct: 50 RLELTALSDDVDLDPARLLGQPVRLDLLTQQSRSALRPFHGHVTRFEQLGANGGLVRYRL 109 Query: 120 TIEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLA 179 IEPWL+FLRHRRDS +FQD S +I+ +F DY GQGRL PAWR L+DAS Y +RS+ Sbjct: 110 VIEPWLAFLRHRRDSFLFQDQSVIEVIDNLFGDYNGQGRLAPAWRWSLRDASVYTRRSVI 169 Query: 180 TQYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFA 239 TQY+E+D FVTRL+ EEGLFY+ EH+ A LG H +VIAD N F NA++T+ F Sbjct: 170 TQYEESDFDFVTRLLAEEGLFYFFEHEAVEGDA-LGVHRMVIADANDVFADNAQATIRFG 228 Query: 240 QTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAAST-ASSGENAHDKLVLTSRD 298 + +A +D IDRW+ VRRWQTNAV I +WDYR R+A A + +L L D Sbjct: 229 RADATANEDVIDRWQGVRRWQTNAVSIASWDYRANTQRSAQLGAQQRRDGIPQLTLQDTD 288 Query: 299 APGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDD 358 PGQY E QAQR A MQA+E+R+K F G G+ R+ PGT F L HYD + Sbjct: 289 YPGQYWFEDSAQAQRSAHVVMQALELRDKQFDGEGSARTLAPGTCFQLVDHYDQGDDGEA 348 Query: 359 QFVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNR 418 +F +L V HQA NN + +T LG G + A + T A YRN Sbjct: 349 RFAVLSVRHQARNNFNERFGEVLTQALGAL-------SGVAVQDAGGNTGTDA-TFYRNH 400 Query: 419 FEAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHWQR 478 F R+ +PYRP DAQG+ L+P+P G Q+A+VVGV G VHTDRD+RI+VQFHWQR Sbjct: 401 FTVARDTLPYRPQQRDAQGQALHPRPTVEGSQTALVVGV-GGPVHTDRDHRIKVQFHWQR 459 Query: 479 GERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFI 538 G RS S S P DD+ A A+ G WVRV +P AG NWGG A+PRVGQEVL++F+ Sbjct: 460 GARSASRQSHPAGDDN--ARADASLGCWVRV---SSPVAGPNWGGVALPRVGQEVLVEFV 514 Query: 539 EGDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSS---GAHNHAAVLSG 595 +GDIDRPVV+G YNG G +AQ NQ GA ATGNAPAWF G S GA+ H AVLSG Sbjct: 515 QGDIDRPVVVGAAYNGSGQRDAQYNQNQAGAAGATGNAPAWFAGDSKSQGAYAHNAVLSG 574 Query: 596 IKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLA 655 IKTQAL SQ+G GYNQLVFDD+ GQ+R L A+ L LG ++Q D+ R A Sbjct: 575 IKTQALGGSQTGASGYNQLVFDDTDGQSRTQLS----TTQAATALTLGHQKEQIDSARQA 630 Query: 656 ATGQGFELKTLYSAALRAGQGLLVSTE--KSISAQLDMTQGLSQLSESAQKQQQLAETAQ 713 G G L T S ++RAG GLL++ + +A LD SQ+ ++ + LA+ A+ Sbjct: 631 DLGHGAALATNDSGSVRAGAGLLLTAHAADTGTALLDSEGAASQIEALSELAESLADVAR 690 Query: 714 KHNARLEGESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDGQGSSATTAFSAPQLQLS 773 A L E+ A LPA++ + + EVL+ +SA G+G+SA A+S P LQ+S Sbjct: 691 TQQAGLPEEAAAQDLPALKQLRHTTEVLRHAESA--------GKGASA-IAYSEPHLQIS 741 Query: 774 SPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPN 833 +P GIAA TPA A++ AG ++ A +D N A GNL G++LF +GKA G + Sbjct: 742 APKGIAATTPADAMLVAGTQVTLAAKQDANLAAGGNLAMAVADGLTLFAHGKAV-GQSSD 800 Query: 834 QETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWLRLE 893 G+A+HAA+GKV + + G++ L + K +TVAS +V+ GK HV + A GA +R+ Sbjct: 801 AARGIAMHAASGKVGLSALKGESRLVAEKAVTVASTQGNVTAEGKAHVLVNAAGAQIRVT 860 Query: 894 GGNIEVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYKSG 940 G IE+H PG F+ + GP + + ++ A G L C + G Sbjct: 861 NGTIELHAPGKTIFKGAGHTFVGPGGAAADNTL-AQGNLKGCGIQEG 906 >Q8XRT1.1 Q8XRT1_RALSO Putative vgr-related protein Length = 918 Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/947 (45%), Positives = 570/947 (60%), Gaps = 55/947 (5%) Query: 4 SDLAALF-GAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGY 62 ++LA L A++Q+ R++RL TPL GP+AL+ ERL E + G G+ Sbjct: 5 TELANLLRAAFTQANRLLRLDTPL----GPNALLPERLDVAEHLDDG-----------GF 49 Query: 63 RLQLSCLSLNADISLRKLLGQPVLLELDTD---GGARAFHGHVTACRMEGANGGMARYLL 119 RL+L+ LS +AD+ +LLGQPV L+L T G R FHGHVT GANGG+ RY L Sbjct: 50 RLELTALSDDADLDPARLLGQPVRLDLLTQQSRGALRPFHGHVTRFEQLGANGGLVRYRL 109 Query: 120 TIEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLA 179 IEPWL+FLRHRRDS +FQD S +I+++F DY GQGRL PAWR L+DAS Y +RS+ Sbjct: 110 VIEPWLAFLRHRRDSFLFQDQSVIEVIDSLFGDYNGQGRLAPAWRWSLRDASVYTRRSVI 169 Query: 180 TQYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIADHNGSFKPNARSTVAFA 239 TQY+E+D FVTRL+ EEGLFY+ EH+ A LG H +VIAD N F NA++ + F Sbjct: 170 TQYEESDFDFVTRLLAEEGLFYFFEHEAVEGDA-LGVHRMVIADANDVFTDNAQAAIRFG 228 Query: 240 QTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAAST-ASSGENAHDKLVLTSRD 298 + +A +D IDRW+ VRRWQTNAV I +WDYR R+A A + +L L D Sbjct: 229 RADATANEDVIDRWQGVRRWQTNAVSIASWDYRANTQRSAQLGAQQWRDGIPQLTLQDTD 288 Query: 299 APGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGGDDD 358 PGQY E QAQR A M+A+E+R+K F G G+VR+ GT F L HY+H + Sbjct: 289 YPGQYWFEDSAQAQRSARLVMEALELRDKQFDGEGSVRTLALGTRFQLVDHYEHGDDGEA 348 Query: 359 QFVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVYRNR 418 +F +L V+H+A NN + +T LG G+ A +A T A YRN Sbjct: 349 RFAVLSVLHRARNNFNERFGQVLTQALGAL-------SGADAQDAAGNAGTDA-TFYRNH 400 Query: 419 FEAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFHWQR 478 F + + +PYRP DAQG L+P+P G Q+A+VVG G VHTDRD+RI+VQFHWQR Sbjct: 401 FTVVHDTVPYRPQQRDAQGRALHPRPTVEGSQTALVVGT-GGPVHTDRDHRIKVQFHWQR 459 Query: 479 GERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFI 538 G RS S P DD+ A A G WVRV AP AG NWGG A+PRVGQEVL++F+ Sbjct: 460 GARSASRQPHPAGDDNARAEAG--LGCWVRV---AAPVAGPNWGGVALPRVGQEVLVEFV 514 Query: 539 EGDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSS---GAHNHAAVLSG 595 +GDIDRPVV+G YNG G +AQ NQ GA ATGNAPAWF G S GA+ H AVLSG Sbjct: 515 QGDIDRPVVVGAAYNGSGQRDAQYNQNQAGAAGATGNAPAWFAGDSKSQGAYAHNAVLSG 574 Query: 596 IKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRLA 655 IKTQAL+ SQ+G GY+QLVFDD+ GQ R L A+ L LG ++Q D+ R A Sbjct: 575 IKTQALAGSQTGASGYSQLVFDDTEGQGRTQLS----TTQAATALTLGHQKEQIDSARQA 630 Query: 656 ATGQGFELKTLYSAALRAGQGLLVSTEKSIS--AQLDMTQGLSQLSESAQKQQQLAETAQ 713 G G L T S ++RAG GLL++ + + A LD SQ+ ++ + LA+ A+ Sbjct: 631 DLGHGAALATNDSGSVRAGAGLLLTAHAADTGAALLDSEGAASQIEALSELAESLADVAR 690 Query: 714 KHNARLEGESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDGQGSSATTAFSAPQLQLS 773 K A L E A LPA++ + + EVL+ +SA G+G+SA A+S P LQ+S Sbjct: 691 KQQAGLPEEPAAQDLPALKQLRHTTEVLRHAESA--------GKGASA-IAYSEPHLQVS 741 Query: 774 SPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGSKPN 833 +P GIAA TPA A++ AG ++ A +D N A GNL G++LF +GKA G + Sbjct: 742 APKGIAATTPADAVLVAGTQIALAAKQDANLAAGGNLAMAVADGLTLFAHGKAV-GQSSD 800 Query: 834 QETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWLRLE 893 G+A+HAA+GKVS+ + G++ L + K +TVAS +V+ GK V + A GA +R+ Sbjct: 801 AARGIAMHAASGKVSLSALKGESRLVAEKAVTVASTQGNVTAEGKARVLVNAAGAQIRVT 860 Query: 894 GGNIEVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYKSG 940 G IE+H PG F+ + GP G+ ++ A G L C + G Sbjct: 861 NGTIELHAPGKTIFKGAGHVFVGPG-GGAVSNTLAQGNLKGCGTQEG 906 >D8N3A6.1 D8N3A6_RALSO Putative Rhs element VGR-related protein Length = 916 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/948 (45%), Positives = 576/948 (60%), Gaps = 61/948 (6%) Query: 4 SDLAALF-GAWSQSARVMRLHTPLDQDYGPHALMAERLQAVEQVGPGEDSSAIDQAIAGY 62 ++LA L A++Q+ R++RL TPL GP+ L+ ERL A E + G G+ Sbjct: 5 TELANLLRAAFTQANRLLRLETPL----GPNVLLPERLDAAEHLDDG-----------GF 49 Query: 63 RLQLSCLSLNADISLRKLLGQPVLLELDTD---GGARAFHGHVTACRMEGANGGMARYLL 119 RL L+ LS +AD+ +LLGQPV L+L T R FHGHVT GANGG+ RY L Sbjct: 50 RLALTALSDDADLDPARLLGQPVRLDLLTQQSRSTLRPFHGHVTQFEQLGANGGLVRYRL 109 Query: 120 TIEPWLSFLRHRRDSAVFQDMSAPVIIEAVFADYRGQGRLQPAWRLDLQDASAYAKRSLA 179 IEPWL+FLRHRRDS +FQDMS +I+++F DY GQGRL PAWR L+DAS YA+RS+ Sbjct: 110 VIEPWLAFLRHRRDSFLFQDMSVIEVIDSLFGDYNGQGRLVPAWRWSLRDASVYARRSVI 169 Query: 180 TQYQETDLAFVTRLMVEEGLFYYIEH---QGDSNSASLGSHTVVIADHNGSFKPNARSTV 236 TQY+E+D FVTRL+ EEGLFY E+ QGD +LG H +VIAD N F NA++T+ Sbjct: 170 TQYEESDFDFVTRLLAEEGLFYVFEYEAVQGD----ALGVHRMVIADANDVFIDNAQATI 225 Query: 237 AFAQTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQAAVRAASTASSGE-NAHDKLVLT 295 F + +A +QD IDRW+ RRWQTNAV I +WDYR A R+A + L L Sbjct: 226 RFGRADATASQDVIDRWQGARRWQTNAVSIASWDYRVNAKRSAQPVGGQQREGGPPLTLL 285 Query: 296 SRDAPGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGHYDHDGG 355 D PGQY E QAQR A M+A+EVR++ F G G+VR+ PGT F L HYDH Sbjct: 286 DTDYPGQYWFEDSAQAQRSARVMMEALEVRSRQFDGEGSVRTLAPGTRFQLADHYDHGDD 345 Query: 356 DDDQFVLLRVVHQAHNNLSADLKAGVTALLGQAQLDDHDHKGSLLDTALRSADTQARPVY 415 + +F +L + HQA NN + +T LG D LD A +A T A Y Sbjct: 346 GEARFAVLSIRHQARNNFNERFGQVLTQTLGALSGPD------ALDGA-SNAGTDA-TFY 397 Query: 416 RNRFEAIRNKIPYRPLLVDAQGERLYPKPQAHGQQSAVVVGVQGQAVHTDRDNRIRVQFH 475 RN F +R+ +PYRP D QG L+P+P +G Q+A+VVG G VHTDRD+RI+VQFH Sbjct: 398 RNHFTVVRDSVPYRPPRSDTQGRALHPRPTVNGGQTALVVG-NGGPVHTDRDHRIKVQFH 456 Query: 476 WQRGERSHSGLSSPTPDDHVGAPANEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLI 535 WQRG RS S P DD+ A A+ G+W+RV AP AG NWGG A+PRVGQEVL+ Sbjct: 457 WQRGARSASRQPHPAGDDN--ARADAGLGSWIRV---AAPVAGPNWGGVALPRVGQEVLV 511 Query: 536 DFIEGDIDRPVVIGTLYNGRGVDNAQGNQAGQGAGSATGNAPAWFPGSS---GAHNHAAV 592 +F++GDIDRPVV+G YNG G +AQ NQ GA ATGNAPAWF G S GA+ H AV Sbjct: 512 EFLQGDIDRPVVVGAAYNGTGQRDAQYNQNQAGAAGATGNAPAWFAGDSKSQGAYAHNAV 571 Query: 593 LSGIKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQ 652 LSGIKTQAL+ SQ+G GYNQLVFDD+ GQ+R L A+ L LG ++Q D+ Sbjct: 572 LSGIKTQALAGSQTGASGYNQLVFDDTNGQSRTQLS----TTQAATALTLGHHKEQIDSA 627 Query: 653 RLAATGQGFELKTLYSAALRAGQGLLVSTEKSISAQ--LDMTQGLSQLSESAQKQQQLAE 710 R A G G L T S ++RAG GLL++ + + LD SQ+ ++ + LA+ Sbjct: 628 RQADLGHGAALATNDSGSVRAGAGLLLTAHAAGTGAALLDSEGAASQIEAISELAESLAD 687 Query: 711 TAQKHNARLEGESDAAKLPAVEAMGESIEVLKATQSASTGSSGSDGQGSSATTAFSAPQL 770 AQK A L GE A +LPA++ + + EVL+ +SA G+G+SA A+S P L Sbjct: 688 VAQKQKAGLPGEPAAQELPALKQLRHTTEVLRHAESA--------GEGASA-IAYSEPHL 738 Query: 771 QLSSPAGIAAVTPASAIIAAGVTSSVTAGKDINQIAQGNLHYLSKSGISLFTYGKASNGS 830 Q+S+P GIAA TPA A++ AG +++ A +D A GNL G++ F +GKA G Sbjct: 739 QVSAPKGIAAATPADAMLVAGTQATLIAKQDATLAAGGNLAMAVADGMTFFAHGKAV-GQ 797 Query: 831 KPNQETGMALHAAAGKVSVQSQAGQTLLTSAKQLTVASVGKDVSVAGKEHVQLAAQGAWL 890 + G+A+HAA+GKV + S G++ L + K +TVAS +V+ K HV++ A GA + Sbjct: 798 SSDAAAGIAMHAASGKVGLSSLKGESRLVAEKAVTVASTQGNVTAEAKAHVRVNAAGAQI 857 Query: 891 RLEGGNIEVHGPGAMEFRASAKELTGPASSGSSASVPAPGPLADCEYK 938 ++ G IE+H PG F+ + GP G++++ A G L C K Sbjct: 858 KVTNGTIELHAPGKTVFKGAGHTFVGPG-GGAASNALAQGNLKACPTK 904