BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0187.p (106 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZ68.1 D8IZ68_HERSS Transmembrane protein 189 1e-46 F1W448.1 F1W448_9BURK Putative transmembrane protein 100 5e-20 C6BCS1.1 C6BCS1_RALP1 Branched-chain amino acid transport 92 2e-17 E2SXY8.1 E2SXY8_9RALS AzlD family protein 92 2e-17 B2UGF7.1 B2UGF7_RALPJ Branched-chain amino acid transport 92 3e-17 B5S8T0.1 B5S8T0_RALSO Putative uncharacterized protein 86 1e-15 B5SGR5.1 B5SGR5_RALSO Putative uncharacterized protein 85 3e-15 A3RQ30.1 A3RQ30_RALSO Putative uncharacterized protein 83 2e-14 D8NY88.1 D8NY88_RALSO Putative uncharacterized protein 75 4e-12 D8N7Q6.1 D8N7Q6_RALSO Putative uncharacterized protein 74 5e-12 >D8IZ68.1 D8IZ68_HERSS Transmembrane protein Length = 107 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/107 (97%), Positives = 104/107 (97%), Gaps = 1/107 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAAMAA-IIFPDLVTA 59 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA A IIFPDLVTA Sbjct: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAAAMAAIIFPDLVTA 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLRWML 106 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLRWML Sbjct: 61 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLRWML 107 >F1W448.1 F1W448_9BURK Putative transmembrane protein Length = 107 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/104 (56%), Positives = 74/104 (71%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAAMAAIIF-PDLVTA 59 M+ IW I L+ L+T++TR FFL GHAVKLP +++HAL YAPAA A I PDLV Sbjct: 1 MTTTEIWITIGLLMLATVLTRCSFFLLGHAVKLPEKVQHALRYAPAAAMAAIVAPDLVLV 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G ++L NP+LLAG+G FF AT+HLLGTI+ GM L+TVLR Sbjct: 61 GGTLDLHWTNPRLLAGLGAVAFFLATKHLLGTIIIGMALYTVLR 104 >C6BCS1.1 C6BCS1_RALP1 Branched-chain amino acid transport Length = 107 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA-MAAIIFPDLVTA 59 MS IW I MT+ T++TRS F + G + LP R++HAL +APAA + AI+ PDL+ Sbjct: 1 MSALQIWLVIAGMTVVTIVTRSLFLIVGDRMTLPTRVQHALRFAPAAALVAIVLPDLLWN 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 +G + S NP+L+AGI F+ ATR +LG I GM +FTVLR Sbjct: 61 QGHFDASWTNPRLMAGIAATAFYVATRRMLGMIFVGMGVFTVLR 104 >E2SXY8.1 E2SXY8_9RALS AzlD family protein Length = 107 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA-MAAIIFPDLVTA 59 MS IW I MT+ T++TRS F + G + LP R++HAL +APAA + AI+ PDL+ Sbjct: 1 MSALEIWLVIAGMTVVTIVTRSLFLIVGDRMTLPTRVQHALRFAPAAALVAIVLPDLLWN 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 +G + S NP+L+AGI F+ ATR +LG I GM +FTVLR Sbjct: 61 QGHFDASWTNPRLMAGIAATAFYVATRRMLGMIFVGMGVFTVLR 104 >B2UGF7.1 B2UGF7_RALPJ Branched-chain amino acid transport Length = 107 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA-MAAIIFPDLVTA 59 MS IW I MT+ T++TRS F + G+ + LP R++HAL +APAA + AI+ PDL+ Sbjct: 1 MSALEIWLVIAGMTVVTIVTRSLFLIVGNRMTLPTRVQHALRFAPAAALVAIVLPDLLWN 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G + S NP+L+AGI F+ ATR +LG I GM +FTVLR Sbjct: 61 HGHFDASWTNPRLMAGIAATAFYVATRRMLGMIFVGMGVFTVLR 104 >B5S8T0.1 B5S8T0_RALSO Putative uncharacterized protein Length = 107 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA-MAAIIFPDLVTA 59 MS IW I MTL T++TR+ F + G + LP R +HAL +APAA + AI+ PDL+ Sbjct: 1 MSTLEIWLTIFGMTLVTVVTRALFLMVGDRITLPMRAQHALRFAPAAALVAIVLPDLLWY 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G + S NP+L+AG+ F+ ATR +L I+ GM ++TVLR Sbjct: 61 HGGFDASWTNPRLMAGVVATAFYVATRRMLSMILVGMAVYTVLR 104 >B5SGR5.1 B5SGR5_RALSO Putative uncharacterized protein Length = 107 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA-MAAIIFPDLVTA 59 MS IW I MTL T++TR+ F + G + LP R +HAL +APAA + AI+ PDL+ Sbjct: 1 MSTLEIWLTIFGMTLVTVVTRALFLMVGDRLTLPLRAQHALRFAPAAALVAIVLPDLLWY 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G + S NP+L+AG+ F+ ATR +L I+ GM ++TVLR Sbjct: 61 HGGFDASWTNPRLMAGVVATAFYVATRRMLSMILVGMAVYTVLR 104 >A3RQ30.1 A3RQ30_RALSO Putative uncharacterized protein Length = 124 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAA-MAAIIFPDLVTA 59 +S IW I MTL T++TR+ F + G + LP R +HAL +APAA + AI+ PDL+ Sbjct: 18 VSTLEIWLTIFGMTLVTVVTRALFLMVGDRLTLPLRAQHALRFAPAAALVAIVLPDLLWY 77 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G + S NP+L+AG+ F+ ATR +L I+ GM ++TVLR Sbjct: 78 HGGFDASWTNPRLMAGVVATAFYVATRRMLSMILVGMAVYTVLR 121 >D8NY88.1 D8NY88_RALSO Putative uncharacterized protein Length = 107 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAAMAA-IIFPDLVTA 59 MS IW I MT+ T++TR+ F + G + LP R++HAL +APAA A I+ PDL+ Sbjct: 1 MSTLEIWLTIFGMTIVTIVTRALFLMVGDRLTLPMRVRHALRFAPAAALAAIVLPDLLWY 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G + S NP+L+AGI A F+ ATR +LG I+ GM ++TVLR Sbjct: 61 HGGFDASWTNPRLMAGIAAAAFYVATRRMLGMILVGMGVYTVLR 104 >D8N7Q6.1 D8N7Q6_RALSO Putative uncharacterized protein Length = 107 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 1 MSDWYIWSAIVLMTLSTLITRSGFFLFGHAVKLPPRLKHALGYAPAAMAA-IIFPDLVTA 59 MS IW I MT+ T++TRS F + G + LP R++HAL +APAA A I+ PDL+ Sbjct: 1 MSTLDIWLTIFGMTIVTIVTRSLFLMVGDRLTLPMRVQHALRFAPAAALAAIVLPDLLWN 60 Query: 60 RGVIELSLANPKLLAGIGGAIFFAATRHLLGTIVAGMTLFTVLR 103 G + S NP+L+AGI F+ ATR +LG I GM ++TVLR Sbjct: 61 HGGFDASWTNPRLMAGIVATAFYVATRRMLGMICVGMAVYTVLR 104