BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0165.p (237 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYK5.1 D8IYK5_HERSS Two component response regulator protein 469 e-131 A4G8B5.1 A4G8B5_HERAR Transcriptional regulatory protein TctD 419 e-115 F1VW25.1 F1VW25_9BURK Response regulators consisting of a CheY-l... 416 e-114 A6T206.1 A6T206_JANMA Two-components system response regulator 415 e-114 A3N689.1 A3N689_BURP6 DNA-binding response regulator 394 e-108 E1T8R5.1 E1T8R5_BURSG Two component transcriptional regulator, w... 392 e-107 Q0KE79.1 Q0KE79_CUPNH Response regulator, OmpR-family 392 e-107 C5Z9M0.1 C5Z9M0_BURPS DNA-binding response regulator 391 e-107 C4KR11.1 C4KR11_BURPS DNA-binding response regulator 391 e-107 B7CIU1.1 B7CIU1_BURPS DNA-binding response regulator 391 e-107 >D8IYK5.1 D8IYK5_HERSS Two component response regulator protein Length = 237 Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust. Identities = 237/237 (100%), Positives = 237/237 (100%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA 237 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA 237 >A4G8B5.1 A4G8B5_HERAR Transcriptional regulatory protein TctD Length = 233 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 207/224 (92%), Positives = 216/224 (96%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGY DCVKNGVEADSALSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYVTDCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRALTRRGA Sbjct: 61 EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVI+HGPLSYDQVGRIAYI +QMLELSARELGLLEVLLQR+GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINDQMLELSARELGLLEVLLQRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEA 224 W EEVSNNAIEVYVHRLRKKIE+GG+RIATVRGLGYCLEK EA Sbjct: 181 WSEEVSNNAIEVYVHRLRKKIEIGGLRIATVRGLGYCLEKFAEA 224 >F1VW25.1 F1VW25_9BURK Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Length = 228 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/228 (91%), Positives = 216/228 (94%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCV NGVEAD ALSTQDFDLLILDLGLP+MSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVHNGVEADLALSTQDFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLR+LRARNS LPVLILTAADS+EQRV+GLDLGADDYMAKPFALSELEARVRALTRRG Sbjct: 61 EVLRKLRARNSHLPVLILTAADSIEQRVKGLDLGADDYMAKPFALSELEARVRALTRRGV 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHGPLSYDQVGRIAYI EQML+LSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGPLSYDQVGRIAYINEQMLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAA 228 WGEEVSNNAIEVYVHRLRKKIE+GGVRIATVRGLGYCLEK +A A Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIELGGVRIATVRGLGYCLEKYIDAPAAT 228 >A6T206.1 A6T206_JANMA Two-components system response regulator Length = 233 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/224 (91%), Positives = 214/224 (95%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCVKNG EADS LSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVKNGAEADSVLSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRALTRRGA Sbjct: 61 EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVI+HGPLSYDQVGRIAYI +QML+LSARELGLLEVLLQR+GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINDQMLDLSARELGLLEVLLQRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEA 224 W EEVSNNAIEVYVHRLRKKIE+GG+RIATVRGLGYCLEK E Sbjct: 181 WSEEVSNNAIEVYVHRLRKKIEIGGLRIATVRGLGYCLEKFTET 224 >A3N689.1 A3N689_BURP6 DNA-binding response regulator Length = 247 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 198/225 (88%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLPKMSGL Sbjct: 1 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E+MLELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGSLSFDQVGRIAYANERMLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 225 >E1T8R5.1 E1T8R5_BURSG Two component transcriptional regulator, winged helix family Length = 280 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/229 (85%), Positives = 210/229 (91%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGL RSLR S YA D VKNGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 1 MRILIAEDDSILADGLVRSLRQSAYAVDHVKNGVEADTALSMQSFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAYI +Q+++LSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGSLSFDQVGRIAYINDQVIDLSARELGLLEVLLQRIGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAA 229 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK + N AA Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEPSGVRIITVRGLGYCLEKAVVSANPAA 229 >Q0KE79.1 Q0KE79_CUPNH Response regulator, OmpR-family Length = 229 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 193/224 (86%), Positives = 210/224 (93%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDD VLADGLTRSLRHSGYA D V NG+EADSALSTQ FDLLILDLGLP+MSGL Sbjct: 1 MRILIAEDDDVLADGLTRSLRHSGYAVDHVTNGLEADSALSTQTFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRAR + LPVLILTAADSV++RV+GLDLGADDYMAKPFALSELEARVRAL RRGA Sbjct: 61 EVLKRLRARGAMLPVLILTAADSVDERVKGLDLGADDYMAKPFALSELEARVRALVRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGG T++RHGPL+YDQVGRIAY+ EQML+LSARE+GLLE+LL R+GRLVSKEQLVDHLCE Sbjct: 121 GGGATLMRHGPLAYDQVGRIAYLNEQMLDLSAREIGLLEILLTRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEA 224 WGEEVSNNAIEVYVHRLRKKIEVGG+RIATVRGLGYCLEK A Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEVGGIRIATVRGLGYCLEKFQPA 224 >C5Z9M0.1 C5Z9M0_BURPS DNA-binding response regulator Length = 273 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/225 (87%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 27 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 86 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 87 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 146 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E++LELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 147 GGGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 206 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 207 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 251 >C4KR11.1 C4KR11_BURPS DNA-binding response regulator Length = 273 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/225 (87%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 27 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 86 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 87 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 146 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E++LELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 147 GGGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 206 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 207 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 251 >B7CIU1.1 B7CIU1_BURPS DNA-binding response regulator Length = 273 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/225 (87%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 27 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 86 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 87 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 146 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E++LELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 147 GGGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 206 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 207 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 251