BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0139.p (725 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYI1.1 D8IYI1_HERSS Chemotaxis histidine kinase protein EC=2.7... 1440 0.0 Q220A4.1 Q220A4_RHOFD CheA signal transduction histidine kinases 634 e-179 D5CS85.1 D5CS85_SIDLE CheA signal transduction histidine kinase 624 e-176 Q47GY3.1 Q47GY3_DECAR CheW-like protein:ATP-binding region, ATPa... 623 e-176 C7RJ89.1 C7RJ89_ACCPU CheA signal transduction histidine kinase 619 e-175 A0KH28.1 A0KH28_AERHH Chemotaxis protein CheA EC=2.7.13.3 616 e-174 A4SQT3.1 A4SQT3_AERS4 Chemotaxis protein CheA 613 e-173 B9Z341.1 B9Z341_9NEIS CheA signal transduction histidine kinase 610 e-172 C6XBH9.1 C6XBH9_METSD CheA signal transduction histidine kinase 608 e-172 B1Y6M4.1 B1Y6M4_LEPCP CheA signal transduction histidine kinase 605 e-171 >D8IYI1.1 D8IYI1_HERSS Chemotaxis histidine kinase protein EC=2.7.3.- Length = 725 Score = 1440 bits (3728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 722/725 (99%), Positives = 722/725 (99%) Query: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI Sbjct: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 Query: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAAL 120 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAAL Sbjct: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAAL 120 Query: 121 LAELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNENVLRD 180 LAELDAVAAFSVDH PASVPVPLAALRGAAGSES TADQAATRVPYWHLSLQLNENVLRD Sbjct: 121 LAELDAVAAFSVDHGPASVPVPLAALRGAAGSESATADQAATRVPYWHLSLQLNENVLRD 180 Query: 181 GLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFE 240 GLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFE Sbjct: 181 GLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFE 240 Query: 241 FVRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAWRGLALFDQAQWQSLEAASATP 300 FVRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAWRGLALFDQ QWQSLEAASATP Sbjct: 241 FVRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAWRGLALFDQTQWQSLEAASATP 300 Query: 301 SDALAAAVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLVGELVIAGASARL 360 SDALAAAVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLVGELVIAGASARL Sbjct: 301 SDALAAAVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLVGELVIAGASARL 360 Query: 361 IARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVRDIARDLGKDIDL 420 IARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVRDIARDLGKDIDL Sbjct: 361 IARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVRDIARDLGKDIDL 420 Query: 421 VMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKASLQLNAIHESGS 480 VMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKASLQLNAIHESGS Sbjct: 421 VMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKASLQLNAIHESGS 480 Query: 481 VVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFSTARQVTELSGRG 540 VVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFSTARQVTELSGRG Sbjct: 481 VVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFSTARQVTELSGRG 540 Query: 541 VGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVGNAVFVIPLDMVV 600 VGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVGNAVFVIPLDMVV Sbjct: 541 VGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVGNAVFVIPLDMVV 600 Query: 601 ECIDMPPQQPGSHIVNVRDEPLPFVPLRELFDLPARERGRNSLVIVQYGPLRAGLLVDGL 660 ECIDMPPQQPGSHIVNVRDEPLPFVPLRELFDLPARERGRNSLVIVQYGPLRAGLLVDGL Sbjct: 601 ECIDMPPQQPGSHIVNVRDEPLPFVPLRELFDLPARERGRNSLVIVQYGPLRAGLLVDGL 660 Query: 661 LGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHHTQQQEQGSAQAYAERG 720 LGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHHTQQQEQGSAQAYAERG Sbjct: 661 LGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHHTQQQEQGSAQAYAERG 720 Query: 721 VASAP 725 VASAP Sbjct: 721 VASAP 725 >Q220A4.1 Q220A4_RHOFD CheA signal transduction histidine kinases Length = 720 Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust. Identities = 348/730 (47%), Positives = 466/730 (63%), Gaps = 20/730 (2%) Query: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 M+ D A V E+RELL ME ALL E + ++AIFR AHTIKGSAGLF D I Sbjct: 1 MNLDDALQTFVIESRELLEGMEDALLAIEQAEEKDELVNAIFRTAHTIKGSAGLFGLDHI 60 Query: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAA- 119 V FTH E VL++VR +L + L+ LLL C D+I L++A+ GQ EP+AE + Sbjct: 61 VAFTHVGESVLDQVRANKLQIADQLVVLLLSCRDHIAALIEAVAAGQI--EPDAELQQQG 118 Query: 120 --LLAELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNENV 177 LL +L A PAS V G + + + T V +WH+SL+ +V Sbjct: 119 EPLLVQLRGYLAPPAATTPASTQVTTGMTPGIDPIQRINGN---TGVDHWHISLRFGPDV 175 Query: 178 LRDGLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLEN 237 L++G+DPLSF+ YL++LG+I + T+ AIP A MD E+CYLG E+ L S++ T+EN Sbjct: 176 LKNGMDPLSFIGYLQTLGKISGIATLPDAIPSADLMDPETCYLGFEIALQSEADKATIEN 235 Query: 238 VFEFVRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAW-RGLALFDQAQWQSLEAA 296 VFEFVRDD R+ ILPP + ++ Y L P D AR+ R L Q +L Sbjct: 236 VFEFVRDDCRLRILPPHSLIADYI-NLINEHPGDVARVGEMLVRCGTLTAQELDTALNTQ 294 Query: 297 SATPSDALA------AAVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLVGE 350 + TP+ + +V P + L + + + E E + I+++ KLDQLI+LVGE Sbjct: 295 ADTPAKPIGTILIEQGSVRPEVMDAALTKQKQVKELGTVESRSIRVDADKLDQLINLVGE 354 Query: 351 LVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVRDI 410 L+I GA LIA R K ++ +EAT + L+E++RD+AL LRMV+I F RF R+V D+ Sbjct: 355 LIIVGAGVNLIAARVKIAELQEATSKLSGLVEEVRDSALQLRMVKIGATFNRFQRVVHDV 414 Query: 411 ARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKASL 470 +RDLGKD+ LV+ G DTELDK++VE++ DPLMH+VRN++DHGIE A R GKPA+ +L Sbjct: 415 SRDLGKDVTLVIKGEDTELDKTVVEKIGDPLMHLVRNSMDHGIESAEVRAQRGKPAQGTL 474 Query: 471 QLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFSTA 530 LNA H+SGS+VI V DDG G+ RE ILAKA +GL P +SDAE+Y +FEPGFSTA Sbjct: 475 TLNACHDSGSIVISVQDDGGGLHRERILAKATERGLVEPGHHMSDAEVYALIFEPGFSTA 534 Query: 531 RQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVGNA 590 +V+ LSGRGVG+DVV+RNI AL G VSID+ G GT V +RLPLTLAII GF V VG + Sbjct: 535 EKVSNLSGRGVGLDVVKRNITALRGTVSIDSTEGVGTTVTVRLPLTLAIIDGFLVEVGKS 594 Query: 591 VFVIPLDMVVECIDMPPQQPGSHIVNVRDEPLPFVPLRELFDLPARERGRNSLVIVQYGP 650 VF IPLDM+ EC+ +PG N+R + LPF+ LRELF++ R ++V++++ Sbjct: 595 VFAIPLDMIEECVAYSA-EPGHDYTNLRGQVLPFIRLRELFNVAEPITRRENIVVLKHAG 653 Query: 651 LRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHHTQQQEQ 710 +AGL+VD LLGE Q VIKPL ++F +VK +SGSTILG G VALILD+ LV QQ Sbjct: 654 QKAGLVVDTLLGEFQTVIKPLAKMFNQVKCVSGSTILGSGEVALILDVPQLV---QQASV 710 Query: 711 GSAQAYAERG 720 ++ A A G Sbjct: 711 NNSNASAWAG 720 >D5CS85.1 D5CS85_SIDLE CheA signal transduction histidine kinase Length = 725 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 328/727 (45%), Positives = 462/727 (63%), Gaps = 20/727 (2%) Query: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 M+ D A + E+RELL ME ALL+ E + I+AIFRAAHTIKGSAGLF + I Sbjct: 1 MNLDEALKTFIIESRELLEQMEDALLRIEQAEHDPEIINAIFRAAHTIKGSAGLFGLEYI 60 Query: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAAL 120 V FTH E VL++VR L +++ L++LLL D+IG LVD +GQE +E + A L Sbjct: 61 VAFTHVAESVLDKVRSGELTIEADLVALLLSARDHIGALVDHAAQGQEPDEDSHRHSAEL 120 Query: 121 LAELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNENVLRD 180 + +L+ + A VP A + E D T WH+SL+ NVLR+ Sbjct: 121 VKQLNLYLGHKAEEATLKNAVPAAQ---SPQIERAIGDGVET--DNWHISLRFGVNVLRN 175 Query: 181 GLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFE 240 G+DPLSF+ YL + G+++ +VT+ +IP + +D ESC+LG E+ +D+ +E FE Sbjct: 176 GMDPLSFIRYLNTFGKVINVVTIVESIPPISQLDPESCHLGFEISYQTDADKTAIEGAFE 235 Query: 241 FVRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAWRGLALFDQAQW-QSLEAASAT 299 FVRDD +I I+PP + + Y L R P+ RL +++ Q+L + Sbjct: 236 FVRDDCQIRIMPPHSKMIEYI-NLIRDLPEKEMRLGEILVQCGTLTESELEQTLRNQAQC 294 Query: 300 PSDAL---------AAAVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLVGE 350 D V P L++ + + E++ E I+++ KLD LI+L+GE Sbjct: 295 ADDHKRPLGETLLEEKVVRPAVVSAALEKQKQVKEQKTAESNLIRVDADKLDHLINLIGE 354 Query: 351 LVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVRDI 410 L IA A L+A+R S+ +EA + L+E++RD+ALTLRMVQI F RF R+VRD+ Sbjct: 355 LTIASAGTVLVAQRAGISELQEAASTMSRLVEEVRDSALTLRMVQIGATFNRFQRVVRDV 414 Query: 411 ARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKASL 470 +++LGK+I+L+++G++TELDK++VE++ DPL H+VRN++DHGIE A R+AAGKPAK +L Sbjct: 415 SKELGKEIELIISGAETELDKTVVEKIGDPLTHLVRNSMDHGIESAEVRIAAGKPAKGTL 474 Query: 471 QLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFSTA 530 +LNA H+SGS+VIEV DDG G+ ++ IL KA+ +GL PDA LSD EI+ +FE GFSTA Sbjct: 475 RLNAYHDSGSIVIEVSDDGGGLKKDKILGKAIERGLVQPDANLSDKEIFNLIFEAGFSTA 534 Query: 531 RQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVGNA 590 V+ LSGRGVGMDVVRRNI AL G + + + G+GT +R+RLPLTLAII GF V VG + Sbjct: 535 DVVSNLSGRGVGMDVVRRNITALRGSIDLSSEEGKGTTIRIRLPLTLAIIDGFLVGVGKS 594 Query: 591 VFVIPLDMVVECIDMPPQQPGS----HIVNVRDEPLPFVPLRELFDLPARERGRNSLVIV 646 FVIPLD+VVECI++ + + +++R + LP++ LR+LFD+ R ++V+V Sbjct: 595 SFVIPLDLVVECIELSEADKRAAKERNYLSLRGQVLPYLRLRDLFDVTGAPVRRENVVVV 654 Query: 647 QYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHHTQ 706 QYG RAGL+VD L GE Q VIKPLGR+F + G+ GSTILG G VALILD+ LV Sbjct: 655 QYGESRAGLVVDTLQGEFQTVIKPLGRIFNHLNGIGGSTILGSGEVALILDVPRLVQQVS 714 Query: 707 QQEQGSA 713 Q + + Sbjct: 715 VQTEKTG 721 >Q47GY3.1 Q47GY3_DECAR CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt Length = 741 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 332/725 (45%), Positives = 464/725 (64%), Gaps = 23/725 (3%) Query: 4 DSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSIVQF 63 D +QE+RE L MEA LLQ E D+I+ IFRAAHTIKG +G+ I F Sbjct: 2 DEITSVFIQESREQLADMEAGLLQLEQNPNDHDNINGIFRAAHTIKGGSGVIECHFIEAF 61 Query: 64 THHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAALLAE 123 TH +E++L+ +R LA+ L +LLL+C D++ L++ + E+E P+AE +A A Sbjct: 62 THRVENLLDALRNNELAVSPPLATLLLECCDHMVSLIEVL--AAESEAPDAECQARGDAL 119 Query: 124 LDAVAAFSVDHAPASVPVPLAALRGA--AGSESVTADQAATRVPYWHLSLQLNENVLRDG 181 + + F +D + P A+ A E ++ WH+S++ ENVLR G Sbjct: 120 TERLKHF-LDGKGETAATPEASSLAVHDATVEVESSGGGIVLTDSWHISVRFGENVLRGG 178 Query: 182 LDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFEF 241 +DPLSF+ YL +LG I+ + T+ A+P AA MD ESCY+G E+ L + S+ +E VF+F Sbjct: 179 MDPLSFIRYLSTLGEILGIETISEAMPAAAEMDPESCYIGFEIQLQTRSSKADIERVFDF 238 Query: 242 VRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAWRGLALFDQAQW------QSLEA 295 VRDD + ILPP + LS Y + + L P+D RL Q + Q A Sbjct: 239 VRDDCDLRILPPNSKLSEYIKHIQEL-PEDTMRLGEILVRCGALTQGELDQGLLSQKFSA 297 Query: 296 ASATPSDALAA-----------AVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQL 344 + +P +A V + + + +++++A+E + ++++ KLDQL Sbjct: 298 ENLSPDNASPGHQLGEILVDHRVVLKEIVDAAVVKQAQINDKKAKEARLVRVQADKLDQL 357 Query: 345 IDLVGELVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFP 404 IDLVGELVIAGASA L+A++ K EAT + L+E IRD+AL LRMVQI + F RF Sbjct: 358 IDLVGELVIAGASANLLAQKSKQGDLVEATSVLSRLVENIRDSALQLRMVQIGDTFTRFN 417 Query: 405 RIVRDIARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGK 464 R+VRD++++LGK+I+LV++G++TELDK++VE++ DPLMH+VRN++DHGIEP A RL GK Sbjct: 418 RVVRDVSKELGKEIELVISGAETELDKTVVEKIGDPLMHLVRNSLDHGIEPTAVRLERGK 477 Query: 465 PAKASLQLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFE 524 PA + LNA H+SGS+VIE+ DDG G+++E I AKA+ +G+ P LSD+EI +FE Sbjct: 478 PACGRVALNAFHDSGSIVIEISDDGGGLNKEKITAKALERGVIQPGETLSDSEIVNLIFE 537 Query: 525 PGFSTARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQ 584 PGFST +V+ LSGRGVGMDVVRRNI+AL G V + + G+G +RLPLTLAII GF Sbjct: 538 PGFSTVDKVSNLSGRGVGMDVVRRNIQALRGAVDVASVDGQGATFTIRLPLTLAIIDGFL 597 Query: 585 VVVGNAVFVIPLDMVVECIDMPPQQPGSHIVNVRDEPLPFVPLRELFDLPARERGRNSLV 644 V VG A +VIPLD VVECI++ Q + +N+R E LPF+ LRELF++P R S+V Sbjct: 598 VGVGKAAYVIPLDTVVECIELKNQLTERNFLNLRGEALPFIRLRELFEVPGEPPPRESIV 657 Query: 645 IVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHH 704 +VQ+G RAG++VD L+GE Q VIKPLG +F ++G+ GSTILG G VALILD+A LVH Sbjct: 658 VVQFGGQRAGIVVDQLMGEFQTVIKPLGAMFRHLRGIGGSTILGSGEVALILDVAALVHA 717 Query: 705 TQQQE 709 Q E Sbjct: 718 VTQAE 722 >C7RJ89.1 C7RJ89_ACCPU CheA signal transduction histidine kinase Length = 729 Score = 619 bits (1595), Expect = e-175, Method: Compositional matrix adjust. Identities = 348/724 (48%), Positives = 456/724 (62%), Gaps = 27/724 (3%) Query: 4 DSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSIVQF 63 D V E+R+ L+AME LL+ E D++ AIFRAAHTIKG AG+ I F Sbjct: 2 DELTSTFVTESRDQLLAMEDGLLKLEQSPDDADNLGAIFRAAHTIKGGAGVVECHFIEAF 61 Query: 64 THHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRA-ALLA 122 TH +E+VL+++R +A+ L +++L+C D++G L+D + G + + R ALLA Sbjct: 62 THKVENVLDKLRNGEIAVSGELSTVMLECCDHLGALLDVLVAGLPLPDAAVQARGDALLA 121 Query: 123 ELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNENVLRDGL 182 L AP+++P+ A A+G V D WH+S++ VLR+G Sbjct: 122 ALTE-KFLGGGAAPSAMPIEREAALAASGGGMVVTDA-------WHISVRFGPGVLRNGT 173 Query: 183 DPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFEFV 242 DPLSFLHYL SLG I+A+ T+ A+P A MD E CYLG E+ + ++ +ENVF+FV Sbjct: 174 DPLSFLHYLASLGEIIAITTLADAMPAADEMDPECCYLGFEMRFQTRASKAQIENVFDFV 233 Query: 243 RDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAWRGLALFDQAQW------QSL-EA 295 RDD + ILPP + + Y + + L P+D RL QA+ QSL A Sbjct: 234 RDDCTLHILPPNSKIDEYLKLINEL-PEDNMRLGEILVRSGALTQAELDAGLTAQSLPTA 292 Query: 296 ASATPS------DALAA--AVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDL 347 TP+ D L V E R + E++A E + I++ KLDQLIDL Sbjct: 293 VEGTPAPQTPLGDILVGQKVVHKEIVEAAASRQAVVSEKKANEARMIRVHADKLDQLIDL 352 Query: 348 VGELVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIV 407 VGELVIAGA A L+A+R S+ E+T + L+E IRD+AL LRMVQI E F RF R+V Sbjct: 353 VGELVIAGAGANLLAQRSGQSELSESTSVLLRLVEDIRDSALQLRMVQIGETFNRFNRVV 412 Query: 408 RDIARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAK 467 RD AR++GK IDLV+TG+DTELDKS+VE+L DPLMH+VRNAIDHGIE A R GKP Sbjct: 413 RDNAREMGKSIDLVITGADTELDKSVVEKLGDPLMHLVRNAIDHGIEAPALRAERGKPEN 472 Query: 468 ASLQLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGF 527 ++QLNA H+SGS++IEV+DDG G+ +E I AKA+A+GL A LSD EI +FE GF Sbjct: 473 GTVQLNAYHDSGSIIIEVIDDGGGLPKEKIRAKAIAKGLIDAAATLSDHEIINLIFEAGF 532 Query: 528 STARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVV 587 STA QVT +SGRGVGMDVVRRNI++L G V + T G G+ +RLPLTLAII GF V Sbjct: 533 STADQVTNISGRGVGMDVVRRNIQSLRGSVEVSTVEGEGSTFTVRLPLTLAIIDGFLTGV 592 Query: 588 GNAVFVIPLDMVVECIDMPPQQPGS-HIVNVRDEPLPFVPLRELFDLPARERGRNSLVIV 646 G A +V+PL+ VVECI++ PGS + +N+R E LPFV LRELF++ GR ++VIV Sbjct: 593 GKAAYVVPLESVVECIEL-ADAPGSRNYLNLRGEVLPFVRLRELFEIGGEVPGRQNVVIV 651 Query: 647 QYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHHTQ 706 QY +AGL+VD LLGE Q VIKPLG LF ++G+ GSTILG G VALILD+ LV Sbjct: 652 QYAGKKAGLVVDTLLGEFQTVIKPLGVLFKHLRGIGGSTILGTGEVALILDVPALVSLVG 711 Query: 707 QQEQ 710 E+ Sbjct: 712 SSEE 715 >A0KH28.1 A0KH28_AERHH Chemotaxis protein CheA EC=2.7.13.3 Length = 737 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 336/736 (45%), Positives = 468/736 (63%), Gaps = 31/736 (4%) Query: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 ++ D A + EARELL ME+ALL E E + + I AIFRAAHTIKGSAGLF I Sbjct: 3 INLDQALQTYIAEARELLEEMESALLTLENEPDNSELIGAIFRAAHTIKGSAGLFGLQPI 62 Query: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAI-ERGQ----EAEEPNAE 115 V FTH +E +L++VR ++L + L+ LL+ D+I LV + E+G+ + + + + Sbjct: 63 VSFTHIVEDLLDQVRNQQLTISEALIKDLLESRDHIERLVSLVAEQGESLGADEQAQDEQ 122 Query: 116 RRAALLAELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNE 175 R L A +H P + P++ G + S+ WH+SL+ Sbjct: 123 LRRNLARHQTTGQAGLPEHNPPAETSPISKEEGHVSATSL-----------WHISLRFGP 171 Query: 176 NVLRDGLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTL 235 +VLR+G+DP SFL YL ++G + A+ T+ A+P+ D ESCYLG E+ L + + L Sbjct: 172 DVLRNGMDPTSFLRYLGTMGTLCAIETIHHALPDWEHFDPESCYLGYELDLDTQADKNAL 231 Query: 236 ENVFEFVRDDSRIDILPPRAPLSAYAERLARLAPQDAARL--------AAAWRGLALFDQ 287 +VFEFVRDD RI I+PP + L+ Y + + L P+D L A L L Q Sbjct: 232 SDVFEFVRDDCRITIIPPHSKLAEYIDLINAL-PEDNEMLGQLLVKTGALTASELVLGLQ 290 Query: 288 AQWQSLEAASATPSDALAA--AVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLI 345 Q + + + + L A AV + + L++ E + +E +++++ KLD LI Sbjct: 291 TQHEQPQTDAGKLGEILIAQGAVSEVVVDAALKKQSQNKESKNKEGRYVRVHADKLDDLI 350 Query: 346 DLVGELVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPR 405 +LVGELV+A + A L+A+R +DSQ +EA I L+E+IRD AL LRMV I + F RF R Sbjct: 351 NLVGELVVASSGANLLAQRSRDSQLQEANSTIAMLVEEIRDGALRLRMVPIGDTFNRFQR 410 Query: 406 IVRDIARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKP 465 +VRD++ +L KDI LV+TG DTELDKS+VE++ DPLMH+VRNA+DHGIEPA R+AA KP Sbjct: 411 VVRDVSHELDKDIALVITGGDTELDKSVVEKIGDPLMHLVRNAMDHGIEPAERRVAACKP 470 Query: 466 AKASLQLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEP 525 A+ +L LNA H+SGS+VIE+ DDG G+++ IL KA +GL + +A L+D EIY+ +FEP Sbjct: 471 ARGTLTLNAYHDSGSIVIEIQDDGAGLNKARILQKAQERGLVTTNATLTDQEIYQLIFEP 530 Query: 526 GFSTARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQV 585 GFSTA +T LSGRGVGMDVV+RNI+AL G V +D+ G GT V++RLPLTLAII GF V Sbjct: 531 GFSTAEAITNLSGRGVGMDVVKRNIQALRGSVELDSKPGLGTRVQIRLPLTLAIIDGFLV 590 Query: 586 VVGNAVFVIPLDMVVECIDMPPQ----QPGSHIVNVRDEPLPFVPLRELFDLPARERGRN 641 V +VIPLDMV+EC+++ G + +N+R E LPFV L+ FD+ R Sbjct: 591 RVSTTHYVIPLDMVIECVELTQSALADTQGRNYINLRGEVLPFVRLQHYFDVEGTRGRRE 650 Query: 642 SLVIVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHL 701 ++V+V +G ++GL+VD LLGE Q VIKPLG+LF +++G+SGSTILG G VALILDI L Sbjct: 651 NIVVVSHGGKKSGLVVDELLGEFQTVIKPLGKLFQRLQGISGSTILGGGEVALILDIPSL 710 Query: 702 VHHTQQQEQGSAQAYA 717 + H +QE G YA Sbjct: 711 IQHAIEQELGQLSQYA 726 >A4SQT3.1 A4SQT3_AERS4 Chemotaxis protein CheA Length = 737 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 332/733 (45%), Positives = 467/733 (63%), Gaps = 31/733 (4%) Query: 4 DSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSIVQF 63 D A + EARELL ME++LL E + + + I AIFRAAHTIKGSAGLF IV F Sbjct: 6 DQALQTYIAEARELLEEMESSLLTLENDPENSELIGAIFRAAHTIKGSAGLFGLQPIVSF 65 Query: 64 THHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIER-----GQEAEEPNAERRA 118 TH +E +L++VR ++L + + L+ LL+ D+I LV + G + +A+ R Sbjct: 66 THIVEDLLDQVRNQQLGITTALIKDLLESRDHIERLVYLVAELGSAPGDDELAQDAQLRL 125 Query: 119 ALLAELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNENVL 178 L A + + +++P P++ G + S+ WH+SL+ +VL Sbjct: 126 NLARHQTASQSQLPERTASTIPDPVSKEEGHTSATSL-----------WHISLRFGPDVL 174 Query: 179 RDGLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENV 238 R+G+DP SFL YL ++G + A+ T+ +P+ D E+CYLG E+ + + + TL +V Sbjct: 175 RNGMDPTSFLRYLGTIGTLCAIETLHDTLPDWEHFDPETCYLGYELDVDTQADKSTLSDV 234 Query: 239 FEFVRDDSRIDILPPRAPLSAYAERLARLAPQDAARL--------AAAWRGLALFDQAQW 290 FEFVRDD RI ILPP + ++ Y + + L P+D L A LAL Q Q Sbjct: 235 FEFVRDDCRITILPPHSKIAEYIDLINEL-PEDNDMLGQLLVKTGALTASELALGLQTQH 293 Query: 291 QSLEAASATPSDALAA--AVEPMAAEGVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLV 348 ++ + L A AV+ + + L++ E + +E +++++ KLD+LI+LV Sbjct: 294 DDQRTENSKLGEILVAQGAVDGVVVDAALKKQNQNKENKNKEGRYVRVHADKLDELINLV 353 Query: 349 GELVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVR 408 GELV+A + A L+A+R +DSQ +EA I L+E+IRD AL LRMV I + F RF R+VR Sbjct: 354 GELVVASSGASLLAQRSRDSQLQEANSTIAMLVEEIRDGALHLRMVPIGDTFNRFQRVVR 413 Query: 409 DIARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKA 468 D++ +L KDI LV+TG DTELDKS+VE++ DPLMH+VRN++DHGIE A +RLAAGKPA+ Sbjct: 414 DVSHELNKDIALVITGGDTELDKSVVEKIGDPLMHLVRNSMDHGIESAEQRLAAGKPARG 473 Query: 469 SLQLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFS 528 +L LNA H+SGS+VIE++DDG G+++ IL KA +GL + A L+D EIY+ +FE GFS Sbjct: 474 TLTLNAYHDSGSIVIEILDDGAGLNKARILQKAQERGLVAAGATLTDQEIYQLIFEAGFS 533 Query: 529 TARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVG 588 TA VT LSGRGVGMDVV+RNI AL G V +D+ G+GT V++RLPLTLAII GF V V Sbjct: 534 TAEAVTNLSGRGVGMDVVKRNITALRGSVELDSKPGQGTRVQIRLPLTLAIIDGFLVRVS 593 Query: 589 NAVFVIPLDMVVECIDMPPQ----QPGSHIVNVRDEPLPFVPLRELFDLPARERGRNSLV 644 +VIPLDMV+EC+++ G + +N+R E LPFV L+ FD+ R ++V Sbjct: 594 TTHYVIPLDMVIECVELTQSALDDTQGRNYINLRGEVLPFVRLQHYFDVEGARGRRENIV 653 Query: 645 IVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVHH 704 +V +G ++GL+VD LLGE Q VIKPLG+LF +++G+SGSTILG G VALILDI L+ H Sbjct: 654 VVSHGGKKSGLVVDELLGEFQTVIKPLGKLFQRLQGISGSTILGGGEVALILDIPSLIQH 713 Query: 705 TQQQEQGSAQAYA 717 QE G YA Sbjct: 714 AIDQELGQLSQYA 726 >B9Z341.1 B9Z341_9NEIS CheA signal transduction histidine kinase Length = 722 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 335/684 (48%), Positives = 445/684 (65%), Gaps = 29/684 (4%) Query: 36 DSIHAIFRAAHTIKGSAGLFAFDSIVQFTHHLEHVLERVREERLALDSHLMSLLLQCSDY 95 D++HAIFRAAHTIKG AG+ D IV FTH +E+VL+++R +A+ + L++LLL C D+ Sbjct: 34 DTLHAIFRAAHTIKGGAGVIECDYIVAFTHVVENVLDQLRNGDIAVSAELIALLLACGDH 93 Query: 96 IGELVDAIERGQEAEEPNAERRAA---LLAELDAVAAFSVDHAPASVPVPLAALRGAAGS 152 IG L+ E P AE + A LLA L A AP +P GA+ + Sbjct: 94 IGLLLGEFE--IRRVHPTAELQLAGDALLARLQRDAR----TAPPGLPPA-----GASSA 142 Query: 153 ESVTADQAATRVPYWHLSLQLNENVLRDGLDPLSFLHYLRSLGRIVALVTVESAIPEAAA 212 + Q WH+SL+ +VL++G+DPLSFLHYL +LG IV L TV A+P A Sbjct: 143 TQPSLGQDMIESECWHISLRFERHVLKNGMDPLSFLHYLGTLGTIVHLETVADAMPPADQ 202 Query: 213 MDAESCYLGMEVCLASDSTLQTLENVFEFVRDDSRIDILPPRAPLSAYAERLARLAPQDA 272 MDAE+CYLG E+ AS + T+E VFEFVRDD + ILPP + L+ Y + L L P+D Sbjct: 203 MDAEACYLGFEIRFASCADKTTIERVFEFVRDDCTLHILPPDSRLADYIDLLQSL-PEDT 261 Query: 273 ARLAAAWRGLALFDQAQ------WQSLEAASATPSDALAAA--------VEPMAAEGVLQ 318 RL + QA+ Q A A P D + V+P E + Sbjct: 262 MRLGEILVRIGALTQAELDDGLLMQQPPMAGAAPPDVVPLGEILVQQQVVQPKLVEAAII 321 Query: 319 RPRALDERRAQEQKFIKIEVSKLDQLIDLVGELVIAGASARLIARRRKDSQFEEATQAID 378 R + +++ E + I+I+ KLD+LIDLVGELVIA AS L+A R ++ EA+ + Sbjct: 322 RQARVSDKKTAEARLIRIQADKLDRLIDLVGELVIASASVSLLASRSGRAELLEASSLMM 381 Query: 379 TLMEQIRDAALTLRMVQINEVFQRFPRIVRDIARDLGKDIDLVMTGSDTELDKSMVERLA 438 L+E RD+AL LRMVQI E F RF RIVRD++++LGKDI+LV+TG +TELDKS+VE++ Sbjct: 382 RLVESTRDSALQLRMVQIGETFSRFNRIVRDVSKELGKDIELVITGGETELDKSVVEKIG 441 Query: 439 DPLMHIVRNAIDHGIEPAAERLAAGKPAKASLQLNAIHESGSVVIEVMDDGRGMDREAIL 498 DPL+H+VRNAIDHGIEP A R AAGKP + L+LNA H+SGS+VI V DDG G++R+ I+ Sbjct: 442 DPLIHLVRNAIDHGIEPTARRTAAGKPPRGRLELNASHDSGSIVITVSDDGGGLNRDKIV 501 Query: 499 AKAVAQGLASPDAELSDAEIYRFVFEPGFSTARQVTELSGRGVGMDVVRRNIEALHGEVS 558 AKA +GL P LS+AEI +FEPGFSTA V+ LSGRGVGMDVV+RNI++L G V Sbjct: 502 AKATERGLLQPGHNLSEAEIDNLIFEPGFSTADHVSSLSGRGVGMDVVKRNIQSLRGHVD 561 Query: 559 IDTGRGRGTVVRLRLPLTLAIISGFQVVVGNAVFVIPLDMVVECIDMPPQQPGSHIVNVR 618 + + G GT +RLPLT+AII GF V G A +V+PLDMVVEC+++ PQ +H +N+R Sbjct: 562 VRSAPGAGTRFSIRLPLTMAIIDGFLVGTGQANYVVPLDMVVECLELSPQTSDNHYLNLR 621 Query: 619 DEPLPFVPLRELFDLPARERGRNSLVIVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKV 678 E LPF+ L ELF+LP + R ++V+V+ G + G++VD LLGE Q VIKPLG LF + Sbjct: 622 GEVLPFIRLHELFNLPGKRPARENVVVVRTGAQKVGIVVDQLLGEFQTVIKPLGHLFQSL 681 Query: 679 KGLSGSTILGDGRVALILDIAHLV 702 +G+ GSTILG G VALILD+ LV Sbjct: 682 RGIGGSTILGSGEVALILDVPALV 705 >C6XBH9.1 C6XBH9_METSD CheA signal transduction histidine kinase Length = 726 Score = 608 bits (1569), Expect = e-172, Method: Compositional matrix adjust. Identities = 328/724 (45%), Positives = 467/724 (64%), Gaps = 25/724 (3%) Query: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 MS D A + E RELL +MEAALL E S ++I+AIFRAAHTIKGSAGLF D I Sbjct: 1 MSLDDAMQTFIIECRELLESMEAALLSAEEAPASEEAINAIFRAAHTIKGSAGLFGLDHI 60 Query: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAAL 120 V F H E VL++VR + LD L++L+LQ D+IG LV +E+ +E + E A L Sbjct: 61 VSFVHVAESVLDKVRNNEIPLDPPLVALMLQVCDHIGLLVSYLEQLKEPDNDLLEGSAIL 120 Query: 121 LAELDAVAAFSVDHAPASVPVPLAALRGAAGSESVTADQAATRVPYWHLSLQLNENVLRD 180 A L + + + +++PV A + G V D WHLSL+ N++VLR+ Sbjct: 121 QAGLSIYLSDTPPPSASTLPVEHEAPYESEGGTPVETDN-------WHLSLRFNQDVLRN 173 Query: 181 GLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLASDSTLQTLENVFE 240 G+DPLSF+ YL +LG++V+++T+ +P AMD E+CYLG E+ +S++ +E+VF+ Sbjct: 174 GMDPLSFIRYLGTLGKVVSIITLTDTLPPLDAMDPETCYLGFEISFSSNADKAEIESVFD 233 Query: 241 FVRDDSRIDILPPRAPLSAYAERLARLAPQDAARLAAAW-RGLALFDQAQWQSLEAASAT 299 FVR+ S I ILPPR+ +S Y E L + P D RL + L Q L + Sbjct: 234 FVREGSLIHILPPRSKISEYIE-LIQSMPADDMRLGELLIKCGTLTRQELEDGLASQRQV 292 Query: 300 PSDALAAAVEPMAAE----------GVLQRPRALDERRAQEQKFIKIEVSKLDQLIDLVG 349 S A + + E L + +A+ + + E I+++ +KLDQLI+LVG Sbjct: 293 ESPDQAKPIGEVLIEQNVVQPVVVAAALDKQKAVKDVKTAEASLIRVDANKLDQLINLVG 352 Query: 350 ELVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEVFQRFPRIVRD 409 EL+IA + A LIA++ E+T I L+E IRD+AL+LRMV I F +F R+VRD Sbjct: 353 ELIIASSGASLIAQKEALPHLLESTSTISRLVETIRDSALSLRMVPIGGTFSKFKRVVRD 412 Query: 410 IARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAERLAAGKPAKAS 469 ++ +LGKDI L ++G +TELDK++VE++ DPL H+VRN++DHGIEPA R+A GKP + Sbjct: 413 VSAELGKDIQLEISGEETELDKTVVEKIGDPLTHLVRNSMDHGIEPADVRVARGKPVVGT 472 Query: 470 LQLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIYRFVFEPGFST 529 L+L+A H+SG+++IEV DDG G++++ I AKAV +GL PD LS+ EIY +FEPGFST Sbjct: 473 LKLDAYHDSGNIIIEVSDDGGGLNKDKIFAKAVERGLIKPDQILSENEIYNLIFEPGFST 532 Query: 530 ARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAIISGFQVVVGN 589 A V+ LSGRGVGMDVVRRNIEAL G V I + G G +R+RLPLTLAII GF V VG+ Sbjct: 533 ADAVSNLSGRGVGMDVVRRNIEALRGTVEIRSVLGEGATMRIRLPLTLAIIDGFLVEVGD 592 Query: 590 AVFVIPLDMVVECIDMPPQQPGSH------IVNVRDEPLPFVPLRELFDLPARERGRNSL 643 + +V+PLDMV+ECI++P Q G + +N+R E LP++ LR+ F++ R ++ Sbjct: 593 SSYVVPLDMVIECIELPVTQAGHNAENDADFINLRGEVLPYLRLRKHFEITGEPPRRENV 652 Query: 644 VIVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIAHLVH 703 V+VQ+G + G++VD L+GE Q VIKPLG++ K++G+ G TILG+GRVALI+D+ ++ Sbjct: 653 VVVQFGDRKMGIVVDQLMGELQTVIKPLGKVLNKIRGIGGFTILGNGRVALIVDVPSMMQ 712 Query: 704 HTQQ 707 + Sbjct: 713 EAEH 716 >B1Y6M4.1 B1Y6M4_LEPCP CheA signal transduction histidine kinase Length = 732 Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust. Identities = 351/733 (47%), Positives = 467/733 (63%), Gaps = 34/733 (4%) Query: 1 MSKDSARHAMVQEARELLVAMEAALLQTEMEGPSRDSIHAIFRAAHTIKGSAGLFAFDSI 60 M+ D A + E+RELL ME ALL E + ++AIFRAAHTIKGSAGLF+ D+I Sbjct: 1 MNIDQALQTFISESRELLGEMEQALLGLEEAEQKDELVNAIFRAAHTIKGSAGLFSLDAI 60 Query: 61 VQFTHHLEHVLERVREERLALDSHLMSLLLQCSDYIGELVDAIERGQEAEEPNAERRAAL 120 V+FTH +E VL++VR R+A+ L+ LLL C D+I L+D +E Q + AAL Sbjct: 61 VEFTHVVESVLDKVRAGRIAIGDALVVLLLACRDHICALIDTVETNQ------GDFEAAL 114 Query: 121 LAELDAVAAFSVDHAPASVPVPLAALRGA---------AGS---ESVTADQAATRVPYWH 168 LA+ + + H P AA GA G+ E + D A T WH Sbjct: 115 LAQGEPLLGQLRGHLGVRADPPAAADTGARTLIADATRPGNGVVERIDRDSATTDC--WH 172 Query: 169 LSLQLNENVLRDGLDPLSFLHYLRSLGRIVALVTVESAIPEAAAMDAESCYLGMEVCLAS 228 +SL+ +VLR+GLDPLSF+ YL++LGRI A+PEA MD E CYLG E+ L + Sbjct: 173 ISLRFGPDVLRNGLDPLSFIRYLQTLGRIAGAAIHTEALPEAGQMDPERCYLGFELALRT 232 Query: 229 DSTLQTLENVFEFVRDDSRIDILPPRAPLSAYAERLARLAPQ--DAARLAAAW-RGLALF 285 D+ T+ENVFEFVRD+ + ILPP + + Y RL Q +AARL R L Sbjct: 233 DADKTTIENVFEFVRDECELRILPPHSRIGDYI----RLIEQQGEAARLGEMLLRCGTLT 288 Query: 286 DQAQWQSLEAASATPSDALAA------AVEPMAAEGVLQRPRALDERRAQEQKFIKIEVS 339 Q ++ +A P + A V+P E L R + + + A E + I+I+ Sbjct: 289 AQELDHAINDQAAHPDKLIGAILVDDGVVQPEVVEAALVRQKQVRDSGAHESRSIRIDAD 348 Query: 340 KLDQLIDLVGELVIAGASARLIARRRKDSQFEEATQAIDTLMEQIRDAALTLRMVQINEV 399 KLDQLI+LVGEL+IAGA+ IA+R + + +E+T + TL++++RD+AL LRMV+I Sbjct: 349 KLDQLINLVGELIIAGANVNQIAQRAQFADLQESTSKLSTLVQEVRDSALQLRMVRIGAT 408 Query: 400 FQRFPRIVRDIARDLGKDIDLVMTGSDTELDKSMVERLADPLMHIVRNAIDHGIEPAAER 459 F RF R+V D++R+LGKDI LV+ G DTELDK++VE+++DPLMH+VRNA+DHGIE AA R Sbjct: 409 FSRFQRVVHDVSRELGKDIALVIQGEDTELDKTVVEKISDPLMHLVRNAMDHGIESAALR 468 Query: 460 LAAGKPAKASLQLNAIHESGSVVIEVMDDGRGMDREAILAKAVAQGLASPDAELSDAEIY 519 L GKPA+ L+LNA H+SGS+VI V DDG G+ RE ILAKA+ +GL LSD+E+Y Sbjct: 469 LERGKPAQGRLELNAFHDSGSIVITVRDDGGGLRRERILAKAIERGLVEAGHTLSDSEVY 528 Query: 520 RFVFEPGFSTARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLRLPLTLAI 579 +FEPGFSTA QVT LSGRGVG+DVV+RNI AL G V I + G GT V +RLPLTLAI Sbjct: 529 GLIFEPGFSTAEQVTNLSGRGVGLDVVKRNITALRGSVEIASTEGTGTTVTVRLPLTLAI 588 Query: 580 ISGFQVVVGNAVFVIPLDMVVECIDMPPQQPGSHIVNVRDEPLPFVPLRELFDLPARERG 639 I GF V G +V+ IPLDM+ ECI +PG N+R + LPF+ LRE+F L A Sbjct: 589 IDGFLVGAGKSVYAIPLDMIEECIAYSA-EPGHDYTNLRGQVLPFIRLREIFALNAPPPR 647 Query: 640 RNSLVIVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRVALILDIA 699 ++V++++G RAGL+VD L+GE Q VIKPL +FG VK +SGSTILG G VALILD+ Sbjct: 648 SQNIVVLKHGKQRAGLVVDRLMGEFQTVIKPLEAMFGHVKCISGSTILGSGEVALILDVP 707 Query: 700 HLVHHTQQQEQGS 712 L++ ++ S Sbjct: 708 ALINRCINHDKRS 720