BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0111.p (339 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYF2.1 D8IYF2_HERSS DNA polymerase III (Delta subunit) protein... 674 0.0 A6T241.1 A6T241_JANMA DNA polymerase III delta subunit EC=2.7.7.7 571 e-161 A4G8E8.1 A4G8E8_HERAR DNA polymerase III, delta subunit EC=2.7.7.7 570 e-160 F1VYF3.1 F1VYF3_9BURK DNA polymerase III delta subunit 482 e-134 C3XCL7.1 C3XCL7_OXAFO DNA polymerase III subunit delta 439 e-121 C3X6E7.1 C3X6E7_OXAFO DNA polymerase III subunit delta 421 e-116 D8N6R9.1 D8N6R9_RALSO DNA-directed DNA polymerase, delta subunit... 416 e-114 Q8XVT5.1 Q8XVT5_RALSO Probable dna polymerase III (Delta subunit... 416 e-114 B5RVS9.1 B5RVS9_RALSO Dna polymerase III (Delta subunit) protein... 416 e-114 B5SI77.1 B5SI77_RALSO Dna polymerase III (Delta subunit) protein... 416 e-114 >D8IYF2.1 D8IYF2_HERSS DNA polymerase III (Delta subunit) protein EC=2.7.7.7 Length = 339 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW 60 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW Sbjct: 1 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW 60 Query: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT 120 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT Sbjct: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT 120 Query: 121 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA 180 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA Sbjct: 121 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA 180 Query: 181 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE 240 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE Sbjct: 181 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE 240 Query: 241 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ 300 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ Sbjct: 241 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ 300 Query: 301 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLARGR 339 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLARGR Sbjct: 301 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLARGR 339 >A6T241.1 A6T241_JANMA DNA polymerase III delta subunit EC=2.7.7.7 Length = 338 Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust. Identities = 279/338 (82%), Positives = 310/338 (91%) Query: 1 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW 60 MQLR D+LDAHL K LA LYVI SDEHLLALEAADKIR++ARA Y+EREVLVV+RSFKW Sbjct: 1 MQLRIDALDAHLNKPLAGLYVITSDEHLLALEAADKIRKAARAQAYSEREVLVVDRSFKW 60 Query: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT 120 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGG+ALQDYAA+LSPDN+T+I+LPKLDWAT Sbjct: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGKALQDYAASLSPDNVTLITLPKLDWAT 120 Query: 121 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA 180 QKAAWV +LQQA+VYIDIPL+ER QLP W+G RLAAQ+QSA+R CLDFIADRVEGNLLAA Sbjct: 121 QKAAWVTSLQQASVYIDIPLIERAQLPAWLGVRLAAQRQSANRECLDFIADRVEGNLLAA 180 Query: 181 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE 240 HQEIQKLALLYP G LSFEQ+ DAVLNVARYDVFKLNEAMLSGD RL RM+EGLKGEGE Sbjct: 181 HQEIQKLALLYPEGPLSFEQIHDAVLNVARYDVFKLNEAMLSGDTTRLVRMLEGLKGEGE 240 Query: 241 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ 300 ALPLVLWAV EE+RTLLKLK+G+AQG+P+ L KEYRIWGPRERL+EPALRR+ LA LE Sbjct: 241 ALPLVLWAVAEEVRTLLKLKAGVAQGRPLSQLTKEYRIWGPRERLVEPALRRLKLATLED 300 Query: 301 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLARG 338 ALQEAA +D+MVKGLRA+ F+GD WDA+LQLGLK+ARG Sbjct: 301 ALQEAAQIDKMVKGLRAKQFSGDAWDAMLQLGLKIARG 338 >A4G8E8.1 A4G8E8_HERAR DNA polymerase III, delta subunit EC=2.7.7.7 Length = 338 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 280/338 (82%), Positives = 310/338 (91%) Query: 1 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW 60 MQLR D+L HL K LA LYVI SDEHLLALEAADKIR++ARA G++EREVLVV+RSFKW Sbjct: 1 MQLRIDALATHLTKPLAGLYVITSDEHLLALEAADKIRQTARAQGFSEREVLVVDRSFKW 60 Query: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT 120 GELLAANQSQSLFGDKKLIELRIPTGKPG+DGG+ALQDYAA+LSPDN+T+I+LPKLDWAT Sbjct: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGRDGGKALQDYAASLSPDNVTLITLPKLDWAT 120 Query: 121 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA 180 QKAAWV +LQQA+V+IDIPLVER QLP W+G RLAAQ QSADR CLDFIA+RVEGNLLAA Sbjct: 121 QKAAWVASLQQASVFIDIPLVERAQLPAWLGVRLAAQGQSADRACLDFIAERVEGNLLAA 180 Query: 181 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE 240 HQEIQKLALLYPAG LSFEQV DAVLNVARYDVFKLNEAMLSGD ARL RM+EGL+GEGE Sbjct: 181 HQEIQKLALLYPAGPLSFEQVHDAVLNVARYDVFKLNEAMLSGDTARLVRMLEGLQGEGE 240 Query: 241 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ 300 ALPLVLWAV EEIRTLLKLKSGMAQG+P+ L KE+RIWGPRERL+EPALRR+ LA LE Sbjct: 241 ALPLVLWAVAEEIRTLLKLKSGMAQGRPLSQLTKEHRIWGPRERLIEPALRRLKLATLES 300 Query: 301 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLARG 338 ALQEAA +D+MVKGLRA+ F+GD WDA+LQLGLK+ARG Sbjct: 301 ALQEAAQIDKMVKGLRAKKFSGDAWDAMLQLGLKIARG 338 >F1VYF3.1 F1VYF3_9BURK DNA polymerase III delta subunit Length = 312 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 236/312 (75%), Positives = 277/312 (88%) Query: 28 LLALEAADKIRRSARANGYTEREVLVVERSFKWGELLAANQSQSLFGDKKLIELRIPTGK 87 +LALEAADKIR++ARA G +ER+VL V+RSFKWGEL AAN QSLFGD+KLIELR+PTGK Sbjct: 1 MLALEAADKIRKTARAQGLSERDVLQVDRSFKWGELTAANNEQSLFGDRKLIELRLPTGK 60 Query: 88 PGKDGGQALQDYAANLSPDNLTIISLPKLDWATQKAAWVGALQQAAVYIDIPLVERPQLP 147 PGK+GGQALQ YAA+ +PDN+T+I+LPKLDWAT KAAWVG LQQ+AVYI+IPL+ER QLP Sbjct: 61 PGKEGGQALQQYAASPNPDNVTLITLPKLDWATAKAAWVGTLQQSAVYIEIPLIERNQLP 120 Query: 148 GWIGNRLAAQQQSADRPCLDFIADRVEGNLLAAHQEIQKLALLYPAGQLSFEQVQDAVLN 207 GWI RLAAQ QSA+R L+F+A+RVEGNLLAAHQEIQKL LL+ GQLSFEQV DAVLN Sbjct: 121 GWISTRLAAQGQSAERDALNFMAERVEGNLLAAHQEIQKLGLLHGDGQLSFEQVHDAVLN 180 Query: 208 VARYDVFKLNEAMLSGDIARLTRMMEGLKGEGEALPLVLWAVTEEIRTLLKLKSGMAQGK 267 VARYDVFKLNEAML+GD+ARL RM++GL+GEGEALPLVLWAV EEIRTLLK+K+ M QG+ Sbjct: 181 VARYDVFKLNEAMLAGDVARLVRMLDGLQGEGEALPLVLWAVAEEIRTLLKIKTAMEQGQ 240 Query: 268 PVGALLKEYRIWGPRERLMEPALRRISLAALEQALQEAALVDRMVKGLRARSFAGDPWDA 327 PVG LLK+YRIWGPRE+LMEPALRR+S+A LE A+Q+AA +DR+VKGLRA + AGD WDA Sbjct: 241 PVGQLLKQYRIWGPREKLMEPALRRLSMATLEAAIQKAAQLDRLVKGLRAPALAGDAWDA 300 Query: 328 LLQLGLKLARGR 339 + QL L +AR R Sbjct: 301 MRQLALGVARPR 312 >C3XCL7.1 C3XCL7_OXAFO DNA polymerase III subunit delta Length = 336 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 205/336 (61%), Positives = 264/336 (78%) Query: 1 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW 60 M L++++L++HL K LAPLY++ DEHLLALEAAD+IR +AR +TEREVL VERSFKW Sbjct: 1 MFLKYEALESHLQKELAPLYILTGDEHLLALEAADRIRHAARTRDFTEREVLTVERSFKW 60 Query: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT 120 G+L A N + SLFGDKKLIELRIPTG+PGK+G ALQ+Y A L+PDN+T+I+LPKLDW T Sbjct: 61 GQLQATNNAMSLFGDKKLIELRIPTGRPGKEGSTALQEYVAGLNPDNITLITLPKLDWTT 120 Query: 121 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA 180 QK+AWV ALQ+ +YID+P ++ +L WI +RLA Q+QS DR +DF+ +RVEGNLLAA Sbjct: 121 QKSAWVSALQKHGIYIDVPTIDLSRLGNWISSRLAKQKQSIDREGIDFLVNRVEGNLLAA 180 Query: 181 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE 240 HQEIQKLALL+P G+LSFEQV +VLNVARYDVFKL EAML G+ R +M+EGLKGEGE Sbjct: 181 HQEIQKLALLFPEGKLSFEQVCSSVLNVARYDVFKLTEAMLGGNRTRFIKMVEGLKGEGE 240 Query: 241 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ 300 LPL+LW VT+EIRTLLK K + +G+ ++ K R+ GPRER ++ + R+ L++ Sbjct: 241 PLPLILWTVTDEIRTLLKCKMALEEGQAFASVSKSLRLRGPRERFIQSTVNRLDKNNLQK 300 Query: 301 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLA 336 ALQ+ A +D+++KGLR+ S D WDAL QLGL +A Sbjct: 301 ALQQTAQIDKIIKGLRSDSMMDDAWDALTQLGLSIA 336 >C3X6E7.1 C3X6E7_OXAFO DNA polymerase III subunit delta Length = 338 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/337 (59%), Positives = 260/337 (77%) Query: 1 MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW 60 M L++++L++HL K LA LYV+ DEHLL LEAAD IR++AR + ERE+L VER FKW Sbjct: 1 MFLKYETLESHLNKELASLYVLTGDEHLLLLEAADMIRKAARDRHFGEREILTVERGFKW 60 Query: 61 GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT 120 G+L AAN + SLFG +KLIELRIP GKPGK+G Q LQ+YAA L+PDN+T+I+LPKLDWA+ Sbjct: 61 GQLHAANNAMSLFGGRKLIELRIPGGKPGKEGSQTLQEYAAELNPDNVTLITLPKLDWAS 120 Query: 121 QKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA 180 QK AWV ALQ+ +YI+IP +E +L WI RL Q Q+A++ +DF+ +RVEGNLLAA Sbjct: 121 QKTAWVSALQKNGIYIEIPSIELSRLGNWISERLKKQNQTANKQGIDFLVERVEGNLLAA 180 Query: 181 HQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMEGLKGEGE 240 HQEIQKL LLYP G+L FEQ+ ++VLNVARYD+FKLNEAML G+ AR RMMEGLKGEGE Sbjct: 181 HQEIQKLGLLYPEGELGFEQICNSVLNVARYDIFKLNEAMLGGNRARFIRMMEGLKGEGE 240 Query: 241 ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLMEPALRRISLAALEQ 300 LPL+LW TEEIRTLLK K+ + G+ A K R+ G RE+L++ A+ R+ L+ Sbjct: 241 PLPLILWTFTEEIRTLLKCKTALESGQTFPATAKTLRLRGQREKLIQMAVNRLEKKDLQI 300 Query: 301 ALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLAR 337 ALQ+ A +D+++KGLR+ S+ D WDAL+QLGL +AR Sbjct: 301 ALQQTAQIDKIIKGLRSDSWMDDAWDALMQLGLFIAR 337 >D8N6R9.1 D8N6R9_RALSO DNA-directed DNA polymerase, delta subunit EC=2.7.7.7 Length = 358 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/350 (60%), Positives = 263/350 (75%), Gaps = 13/350 (3%) Query: 1 MQLRHDSLDAHL----GKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVER 56 MQLR D+L+ HL K LAPLYV+ DEHLL LEA D +R++ARA G++EREV+ VER Sbjct: 1 MQLRLDALEGHLKQAGSKGLAPLYVVHGDEHLLVLEAVDALRQAARAQGFSEREVMTVER 60 Query: 57 SFKWGELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANL----SPDNLTIIS 112 F W + A QS SLFGD+K++ELRIP+GKPGKDGG+AL+ AA + D +T+I+ Sbjct: 61 GFSWSRVTEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRALAAGTPSGPATDTVTLIT 120 Query: 113 LPKLDWATQKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSAD-----RPCLD 167 LP+LD+AT K+AW AL+ A V I + V+R +LPGWIG RLA QQQ + R L Sbjct: 121 LPRLDFATAKSAWFAALEGAGVSIKVDSVDRAKLPGWIGERLARQQQRVEAGEPGRRALQ 180 Query: 168 FIADRVEGNLLAAHQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIAR 227 FIADRVEGNLLAAHQEIQKL LL+P G LSF+ V DAVLNVARYDVFKL+EAMLSGD+ R Sbjct: 181 FIADRVEGNLLAAHQEIQKLGLLHPPGVLSFDAVHDAVLNVARYDVFKLSEAMLSGDVPR 240 Query: 228 LTRMMEGLKGEGEALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLME 287 L RM+EGL+GEGEA LVLW +TEEIR L K+ SG AQGKP+ ++L+E R+WGPRERL+ Sbjct: 241 LVRMLEGLRGEGEATVLVLWTLTEEIRVLSKIASGAAQGKPMASMLRELRVWGPRERLVP 300 Query: 288 PALRRISLAALEQALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLAR 337 A++R+S LE ALQ AA +DR VKGLR S +PWD LLQL +++AR Sbjct: 301 QAVQRLSQPELEAALQMAARLDRQVKGLREPSLPAEPWDGLLQLAMRIAR 350 >Q8XVT5.1 Q8XVT5_RALSO Probable dna polymerase III (Delta subunit) protein EC=2.7.7.7 Length = 358 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/350 (60%), Positives = 263/350 (75%), Gaps = 13/350 (3%) Query: 1 MQLRHDSLDAHL----GKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVER 56 MQLR D+L+ HL K LAPLYV+ DEHLL LEA D +R++ARA G++EREV+ VER Sbjct: 1 MQLRLDALEGHLKQAGSKGLAPLYVVHGDEHLLVLEAVDALRQAARAQGFSEREVMTVER 60 Query: 57 SFKWGELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANL----SPDNLTIIS 112 F W + A QS SLFGD+K++ELRIP+GKPGKDGG+AL+ AA + D +T+I+ Sbjct: 61 GFSWSRVTEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRALAAGTPSGPAADTVTLIT 120 Query: 113 LPKLDWATQKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSAD-----RPCLD 167 LP+LD+AT K+AW AL+ A V I + V+R +LPGWIG RLA QQQ + R L Sbjct: 121 LPRLDFATAKSAWFAALEGAGVSIKVDSVDRAKLPGWIGERLARQQQRVEAGESGRRALQ 180 Query: 168 FIADRVEGNLLAAHQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIAR 227 FIADRVEGNLLAAHQEIQKL LL+P G LSF+ V DAVLNVARYDVFKL+EAMLSGD+ R Sbjct: 181 FIADRVEGNLLAAHQEIQKLGLLHPPGVLSFDAVHDAVLNVARYDVFKLSEAMLSGDVPR 240 Query: 228 LTRMMEGLKGEGEALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLME 287 L RM+EGL+GEGEA LVLW +TEEIR L K+ SG AQGKP+ ++L+E R+WGPRERL+ Sbjct: 241 LVRMLEGLRGEGEATVLVLWTLTEEIRVLSKIASGAAQGKPMASMLRELRVWGPRERLVP 300 Query: 288 PALRRISLAALEQALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLAR 337 A++R+S LE ALQ AA +DR VKGLR S +PWD LLQL +++AR Sbjct: 301 QAVQRLSQPELEAALQMAARLDRQVKGLREPSLPAEPWDGLLQLAMRIAR 350 >B5RVS9.1 B5RVS9_RALSO Dna polymerase III (Delta subunit) protein EC=2.7.7.7 Length = 358 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 212/350 (60%), Positives = 263/350 (75%), Gaps = 13/350 (3%) Query: 1 MQLRHDSLDAHL----GKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVER 56 MQLR D+L+ HL K LAPLYV+ DEHLL LEA D +R++ARA G++ER+V+ VER Sbjct: 1 MQLRLDALEGHLKQAGSKGLAPLYVVHGDEHLLVLEAVDALRQTARAQGFSERDVMTVER 60 Query: 57 SFKWGELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSP----DNLTIIS 112 F W + A QS SLFGD+K++ELRIP+GKPGKDGG+AL+ AA P D +T+I+ Sbjct: 61 GFSWSRVTEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRALAAGTPPGPATDTVTLIT 120 Query: 113 LPKLDWATQKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSAD-----RPCLD 167 LP+LD+AT K+AW AL+ A V I + V+R +LPGWIG RLA QQQ + R L Sbjct: 121 LPRLDFATAKSAWFAALEGAGVSIKVDSVDRAKLPGWIGERLARQQQRVEAGEPGRRALQ 180 Query: 168 FIADRVEGNLLAAHQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIAR 227 FIADRVEGNLLAAHQEIQKL LL+P G LSF+ V DAVLNVARYDVFKL+EAML+GD+ R Sbjct: 181 FIADRVEGNLLAAHQEIQKLGLLHPPGVLSFDAVHDAVLNVARYDVFKLSEAMLAGDVPR 240 Query: 228 LTRMMEGLKGEGEALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLME 287 L RM+EGL+GEGEA LVLW +TEEIR L K+ SG AQGKP+ ++L+E R+WGPRERL+ Sbjct: 241 LVRMLEGLRGEGEATVLVLWTLTEEIRVLSKIASGSAQGKPMASMLRELRVWGPRERLVP 300 Query: 288 PALRRISLAALEQALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLAR 337 A++R+S LE ALQ AA +DR VKGLR S +PWD LLQL +++AR Sbjct: 301 QAVQRLSQHDLEAALQMAARLDRQVKGLREPSLPAEPWDGLLQLAMRIAR 350 >B5SI77.1 B5SI77_RALSO Dna polymerase III (Delta subunit) protein EC=2.7.7.7 Length = 358 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 212/350 (60%), Positives = 263/350 (75%), Gaps = 13/350 (3%) Query: 1 MQLRHDSLDAHL----GKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVER 56 MQLR D+L+ HL K LAPLYV+ DEHLL LEA D +R++ARA G++ER+V+ VER Sbjct: 1 MQLRLDALEGHLKQAGSKGLAPLYVVHGDEHLLVLEAVDALRQTARAQGFSERDVMTVER 60 Query: 57 SFKWGELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSP----DNLTIIS 112 F W + A QS SLFGD+K++ELRIP+GKPGKDGG+AL+ AA P D +T+I+ Sbjct: 61 GFSWSRVTEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRALAAGTPPGPATDTVTLIT 120 Query: 113 LPKLDWATQKAAWVGALQQAAVYIDIPLVERPQLPGWIGNRLAAQQQSAD-----RPCLD 167 LP+LD+AT K+AW AL+ A V I + V+R +LPGWIG RLA QQQ + R L Sbjct: 121 LPRLDFATAKSAWFAALEGAGVSIKVDSVDRTKLPGWIGERLARQQQRVEAGEPGRRALQ 180 Query: 168 FIADRVEGNLLAAHQEIQKLALLYPAGQLSFEQVQDAVLNVARYDVFKLNEAMLSGDIAR 227 FIADRVEGNLLAAHQEIQKL LL+P G LSF+ V DAVLNVARYDVFKL+EAML+GD+ R Sbjct: 181 FIADRVEGNLLAAHQEIQKLGLLHPPGVLSFDAVHDAVLNVARYDVFKLSEAMLAGDVPR 240 Query: 228 LTRMMEGLKGEGEALPLVLWAVTEEIRTLLKLKSGMAQGKPVGALLKEYRIWGPRERLME 287 L RM+EGL+GEGEA LVLW +TEEIR L K+ SG AQGKP+ ++L+E R+WGPRERL+ Sbjct: 241 LVRMLEGLRGEGEATVLVLWTLTEEIRVLSKIASGSAQGKPMASMLRELRVWGPRERLVP 300 Query: 288 PALRRISLAALEQALQEAALVDRMVKGLRARSFAGDPWDALLQLGLKLAR 337 A++R+S LE ALQ AA +DR VKGLR S +PWD LLQL +++AR Sbjct: 301 QAVQRLSQHDLEAALQMAARLDRQVKGLREPSLPAEPWDGLLQLAMRIAR 350