BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0029.p (208 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXF7.1 D8IXF7_HERSS Transmembrane protein 408 e-112 F2MZA1.1 F2MZA1_PSEST Putative uncharacterized protein 270 9e-71 A4VMX2.1 A4VMX2_PSEU5 Membrane protein, putative 240 9e-62 A9ALR0.1 A9ALR0_BURM1 Putative membrane protein 239 3e-61 B9CEV5.1 B9CEV5_9BURK Inner membrane protein YicG 238 3e-61 B9BUL4.1 B9BUL4_9BURK Inner membrane protein YicG 238 3e-61 B9B2K4.1 B9B2K4_9BURK Inner membrane protein YicG 238 3e-61 B8L8C3.1 B8L8C3_9GAMM Bicyclomycin/multidrug efflux system 234 6e-60 F0G4K4.1 F0G4K4_9BURK Putative uncharacterized protein 234 8e-60 B4EKB6.1 B4EKB6_BURCJ Putative membrane protein 233 1e-59 >D8IXF7.1 D8IXF7_HERSS Transmembrane protein Length = 208 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/208 (99%), Positives = 208/208 (100%) Query: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGT+RDILIGHYPLGWVA Sbjct: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTMRDILIGHYPLGWVA 60 Query: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV Sbjct: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL Sbjct: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 Query: 181 LGFAVRLLAIRFHWELPRMDKDRVRGFD 208 LGFAVRLLAIRFHWELPRMDKDRVRGFD Sbjct: 181 LGFAVRLLAIRFHWELPRMDKDRVRGFD 208 >F2MZA1.1 F2MZA1_PSEST Putative uncharacterized protein Length = 208 Score = 270 bits (690), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 126/207 (60%), Positives = 168/207 (81%), Gaps = 1/207 (0%) Query: 2 LLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAH 61 LLHTIYLIAI AEA+SGA+MG+R+ MD+FG+CL+GTV ALGGGT RD+L+GHYP+GW+AH Sbjct: 3 LLHTIYLIAITAEAMSGAIMGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAH 62 Query: 62 PEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVM 121 PEYL FTI AA+V AR LHH + FL+VD LGLVAFTVIGCD+A G HP+IVV+ Sbjct: 63 PEYLTFTIGAAIVTGFIARHLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGA-HPSIVVL 121 Query: 122 LGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLL 181 G++TG+FGGL+RDVLCN++P+VL+RE+YA+V+L TG YVG+L L+++ +AT+++L Sbjct: 122 AGVITGIFGGLMRDVLCNQVPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGS 181 Query: 182 GFAVRLLAIRFHWELPRMDKDRVRGFD 208 GF R+LA+ F W+LP + +RG + Sbjct: 182 GFLFRVLAMTFSWKLPDFNGKDIRGLE 208 >A4VMX2.1 A4VMX2_PSEU5 Membrane protein, putative Length = 187 Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 110/188 (58%), Positives = 150/188 (79%), Gaps = 1/188 (0%) Query: 21 MGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHPEYLAFTICAAVVAAVAAR 80 MG+R+ MD+FG+CL+GTV ALGGGT RD+L+GHYP+GW+AHPEYL FTI AA+V AR Sbjct: 1 MGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIAR 60 Query: 81 ALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVMLGMVTGVFGGLLRDVLCNE 140 LHH + FL+VD LGLVAFTVIGCD+A G HP+IVV+ G++TG+FGGL+RDVLCN+ Sbjct: 61 HLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGA-HPSIVVLAGVITGIFGGLMRDVLCNQ 119 Query: 141 IPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLGFAVRLLAIRFHWELPRMD 200 +P+VL+RE+YA+V+L TG YVG+L L+++ +AT+++L GF R+LA+ F W+LP + Sbjct: 120 VPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGSGFLFRVLAMTFSWKLPDFN 179 Query: 201 KDRVRGFD 208 +RG + Sbjct: 180 GKDIRGLE 187 >A9ALR0.1 A9ALR0_BURM1 Putative membrane protein Length = 203 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRIARHVARMKTLFVTVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATVVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >B9CEV5.1 B9CEV5_9BURK Inner membrane protein YicG Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRLARHVARMKTLFVAVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATIVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >B9BUL4.1 B9BUL4_9BURK Inner membrane protein YicG Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRLARHVARMKTLFVAVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATIVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >B9B2K4.1 B9B2K4_9BURK Inner membrane protein YicG Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRIARHVARMKTLFVTVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATVVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >B8L8C3.1 B8L8C3_9GAMM Bicyclomycin/multidrug efflux system Length = 205 Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 117/198 (59%), Positives = 151/198 (76%), Gaps = 1/198 (0%) Query: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL IYLIAI AEA++GAL R+ MD+FGV +I V ALGGG++RDIL+GHYPLGWV Sbjct: 1 MLLSIIYLIAISAEAMTGALSAGRRRMDLFGVVMIACVTALGGGSLRDILLGHYPLGWVK 60 Query: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 HPEYL FT+CAA++A AR +HHF+ FLV+D LGL+AFT+IGC IAR P IV+ Sbjct: 61 HPEYLGFTVCAALIATWVARWMHHFRRTFLVLDGLGLIAFTLIGCSIAREAGHATP-IVL 119 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 + GM+TG FGG+LRD+LCNE+PL+ ++E+YA +SLLTGA Y+ +LH V A + L Sbjct: 120 IAGMLTGAFGGVLRDILCNEVPLIFQKELYAIISLLTGAVYLLLLHWGVADATAILCCLG 179 Query: 181 LGFAVRLLAIRFHWELPR 198 GFA+RLLAI + WE+P+ Sbjct: 180 GGFALRLLAIHYRWEMPK 197 >F0G4K4.1 F0G4K4_9BURK Putative uncharacterized protein Length = 203 Score = 234 bits (596), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 118/196 (60%), Positives = 153/196 (78%), Gaps = 5/196 (2%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDI--ARGFADFHPAIVV 120 EYL T+ AA VA+ AAR + K+ F+ VDA+GL AFT+IGCDI + G A IVV Sbjct: 61 EYLVITLVAATVASWAARHVARMKTLFVTVDAIGLAAFTIIGCDIGASTGAASI---IVV 117 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 + G +TGV GG+LRD+LCNE+PL+LR E+YASV+ +TGA YVG+ L VD AT+ +L Sbjct: 118 LAGAITGVCGGMLRDLLCNEMPLILREELYASVAFVTGALYVGMQQLGVDAGFATVCALA 177 Query: 181 LGFAVRLLAIRFHWEL 196 GFA+R+LA+RF W++ Sbjct: 178 AGFAMRMLAVRFGWKM 193 >B4EKB6.1 B4EKB6_BURCJ Putative membrane protein Length = 203 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 113/194 (58%), Positives = 151/194 (77%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 EYL T+ AA VA+ AAR + K+ F+ VDA+GL AFT+IGCD+ P IVV+ Sbjct: 61 EYLVITLVAATVASWAARHVARMKTLFVTVDAIGLAAFTIIGCDVGASTGT-APIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LR E+YASV+ +TG+ YVG+ HL +D AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILREELYASVAFVTGSLYVGMQHLGIDTGFATLVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 F++R+LA+R W++ Sbjct: 180 FSMRMLAVRLGWKM 193