BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0002.p (162 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPQ1.1 D8IPQ1_HERSS SOS mutagenesis and repair protein 320 4e-86 B9TCM1.1 B9TCM1_RICCO Uv inducible DNA polymerase umuc / mucb, p... 207 6e-52 A4SWQ9.1 A4SWQ9_POLSQ DNA-directed DNA polymerase EC=2.7.7.7 199 1e-49 D9SJZ1.1 D9SJZ1_GALCS DNA-directed DNA polymerase EC=2.7.7.7 195 2e-48 C6XE77.1 C6XE77_METSD DNA-directed DNA polymerase EC=2.7.7.7 191 3e-47 D9SCY5.1 D9SCY5_GALCS DNA-directed DNA polymerase EC=2.7.7.7 190 6e-47 B7JBK8.1 B7JBK8_ACIF2 UmuC protein 189 1e-46 Q5NWB8.1 Q5NWB8_AROAE DNA repair protein 188 2e-46 C6NRA6.1 C6NRA6_9GAMM Error-prone repair protein UmuC 188 2e-46 E6QDZ7.1 E6QDZ7_9ZZZZ DNA polymerase V, subunit C 186 8e-46 >D8IPQ1.1 D8IPQ1_HERSS SOS mutagenesis and repair protein Length = 162 Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 154/162 (95%), Positives = 158/162 (97%) Query: 1 VSNQPPSQARRAGFALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALG 60 +S+Q PSQARRAGFALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGC VA SNEAKALG Sbjct: 1 MSSQRPSQARRAGFALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCTVARSNEAKALG 60 Query: 61 IKMAAPWFMMQELARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALD 120 IKMAAPWFMMQELARQHGIVALSSNYTLYADMSNRVT+VLRQYSPRLEVYSIDESFLALD Sbjct: 61 IKMAAPWFMMQELARQHGIVALSSNYTLYADMSNRVTEVLRQYSPRLEVYSIDESFLALD 120 Query: 121 GLAGLWPSMSDMGQAIRHQVLTWVGVPVCVGMGATKKVIPTK 162 GLAGLWPSMSDMGQAIRHQVLTWVGVPVCVG+ ATKKVIPTK Sbjct: 121 GLAGLWPSMSDMGQAIRHQVLTWVGVPVCVGIWATKKVIPTK 162 >B9TCM1.1 B9TCM1_RICCO Uv inducible DNA polymerase umuc / mucb, putative EC=2.7.7.7 Length = 360 Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 101/152 (66%), Positives = 118/152 (77%), Gaps = 3/152 (1%) Query: 7 SQARRAGFALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAP 66 + A+RA ALVDVNNFYVSCERVF+PKLR RPVVVLSNNDGCAVA SNE KALG+ M AP Sbjct: 7 ATAQRA-IALVDVNNFYVSCERVFNPKLRNRPVVVLSNNDGCAVARSNEVKALGVPMGAP 65 Query: 67 WFMMQELARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLW 126 WF ++LA+QHGI+A SSNY LYADMSNRV +LRQ+SP EVYSIDE FL L G A Sbjct: 66 WFKFKDLAKQHGIIAYSSNYALYADMSNRVMSILRQFSPNQEVYSIDECFLDLTGFARR- 124 Query: 127 PSMSDMGQAIRHQVLTWVGVPVCVGMGATKKV 158 + GQ IR ++L W G+PVCVG+ +TK + Sbjct: 125 -DLVVYGQDIRKRILQWTGLPVCVGIASTKTL 155 >A4SWQ9.1 A4SWQ9_POLSQ DNA-directed DNA polymerase EC=2.7.7.7 Length = 450 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 91/145 (62%), Positives = 113/145 (77%) Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQEL 73 FALVDVNNFYVSCERVF PKL P+VVLSNNDGCAVA S E KALGIK PWF MQEL Sbjct: 28 FALVDVNNFYVSCERVFQPKLEDVPMVVLSNNDGCAVARSAEVKALGIKTGTPWFQMQEL 87 Query: 74 ARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMSDMG 133 A++HGI A SSNYTLY DMS+RV +VLR ++P LEVYSIDESFL ++ + + ++G Sbjct: 88 AKKHGIQAYSSNYTLYGDMSSRVVEVLRAFTPNLEVYSIDESFLQIETVLKQYQDTVELG 147 Query: 134 QAIRHQVLTWVGVPVCVGMGATKKV 158 ++++ +V G+PVCVG+GA+K + Sbjct: 148 RSMKEKVRDTTGLPVCVGIGASKTL 172 >D9SJZ1.1 D9SJZ1_GALCS DNA-directed DNA polymerase EC=2.7.7.7 Length = 424 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/146 (63%), Positives = 111/146 (76%), Gaps = 4/146 (2%) Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQEL 73 ALVD NNFYVSCERVF+P+L +PVVVLSNNDGCAVA SNE KALG+KMA PWF M++L Sbjct: 3 IALVDCNNFYVSCERVFNPQLEDKPVVVLSNNDGCAVARSNEVKALGVKMAEPWFKMEKL 62 Query: 74 ARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWP-SMSDM 132 A+QHGI+ALSSNYTLY D+S RV +L +SP+ E+YSIDE FL LAG P S+ Sbjct: 63 AKQHGIIALSSNYTLYGDLSARVMSILSTFSPKQEIYSIDECFL---DLAGFDPKSLIGY 119 Query: 133 GQAIRHQVLTWVGVPVCVGMGATKKV 158 GQ IR + VG+PVCVG+ TK + Sbjct: 120 GQTIRKTIRQQVGIPVCVGIAETKTL 145 >C6XE77.1 C6XE77_METSD DNA-directed DNA polymerase EC=2.7.7.7 Length = 424 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 89/148 (60%), Positives = 112/148 (75%), Gaps = 3/148 (2%) Query: 11 RAGFALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMM 70 + AL+DVNNFY SCERVF+P L+ R VVVLSNNDGC VA S EAKALGIKM PWF + Sbjct: 2 KRAIALIDVNNFYASCERVFNPALKDRVVVVLSNNDGCVVARSAEAKALGIKMGVPWFQL 61 Query: 71 QELARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMS 130 ++ AR++ I+ALSSNY LYADMSNRV +++ QY+P EVYSIDESFL L G+ G + Sbjct: 62 KDEARRYKILALSSNYALYADMSNRVMKIISQYAPTQEVYSIDESFLDLTGMPG---RHA 118 Query: 131 DMGQAIRHQVLTWVGVPVCVGMGATKKV 158 D+ Q +R Q+ W G+PVCVG+G +K + Sbjct: 119 DIAQKMRGQIRQWTGLPVCVGIGPSKTL 146 >D9SCY5.1 D9SCY5_GALCS DNA-directed DNA polymerase EC=2.7.7.7 Length = 425 Score = 190 bits (483), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 88/146 (60%), Positives = 110/146 (75%), Gaps = 4/146 (2%) Query: 13 GFALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQE 72 ALVD NNFYVSCER+F P L +PVV+LSNNDGC V+ S E K LGI MAAPWF ++E Sbjct: 4 AIALVDCNNFYVSCERLFQPALEGKPVVILSNNDGCVVSRSQEVKNLGIAMAAPWFKLKE 63 Query: 73 LARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMSDM 132 LA+QHGI+ALSSNYTLYAD+SNRV +VL Q+SP EVYSIDE FL + G+ ++ Sbjct: 64 LAKQHGIIALSSNYTLYADLSNRVMRVLAQFSPDQEVYSIDECFLDVTGI----DELTRY 119 Query: 133 GQAIRHQVLTWVGVPVCVGMGATKKV 158 Q++R +V VG+PVCVG+ A+K + Sbjct: 120 AQSMRQRVKQHVGIPVCVGIAASKTL 145 >B7JBK8.1 B7JBK8_ACIF2 UmuC protein Length = 427 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 92/145 (63%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQEL 73 ALVD NNFYVSCERVF P L RPVVVLSNNDGC VA S E KALG+ M PWF +Q+L Sbjct: 3 IALVDANNFYVSCERVFRPDLEGRPVVVLSNNDGCVVARSAEVKALGVAMGTPWFQLQKL 62 Query: 74 ARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMSDMG 133 AR+ GI+ALSSNY+LYADMSNR+ +L +SP EVYSIDE FL L G A +S +G Sbjct: 63 ARREGIIALSSNYSLYADMSNRMMGILSTFSPIQEVYSIDECFLDLSGFAQ--DRLSQLG 120 Query: 134 QAIRHQVLTWVGVPVCVGMGATKKV 158 QA R +V WVG+PV VG+ ATK + Sbjct: 121 QAARQRVRQWVGLPVGVGIAATKTL 145 >Q5NWB8.1 Q5NWB8_AROAE DNA repair protein Length = 430 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 89/145 (61%), Positives = 108/145 (74%), Gaps = 2/145 (1%) Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQEL 73 FALVD NNFY SCE++FDP+L R VVVLSNNDGC VA S EAK LG+ M APWF + L Sbjct: 8 FALVDCNNFYASCEKLFDPRLAGRAVVVLSNNDGCVVARSAEAKVLGVPMGAPWFKLAGL 67 Query: 74 ARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMSDMG 133 A++HGI+ALSSNY LYADMSNRV +VL ++PRLEVYSIDE FL L G A L + + Sbjct: 68 AQRHGIIALSSNYALYADMSNRVIEVLASFTPRLEVYSIDECFLDLAGFAQL--DLVEYS 125 Query: 134 QAIRHQVLTWVGVPVCVGMGATKKV 158 IR +V W+G+PVC+G+ TK + Sbjct: 126 YRIRDRVSQWLGLPVCIGIAPTKTL 150 >C6NRA6.1 C6NRA6_9GAMM Error-prone repair protein UmuC Length = 427 Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 91/145 (62%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQEL 73 AL+D NNFYVSCERVF P L RPVVVLSNNDGC VA S E KALG+ M PWF +Q+L Sbjct: 3 IALIDANNFYVSCERVFRPSLEGRPVVVLSNNDGCVVARSAEVKALGVAMGTPWFQLQKL 62 Query: 74 ARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMSDMG 133 A+Q GI+ALSSNYTLYADMSNR+ VL +SP EVYSIDE FL L G A + + +G Sbjct: 63 AKQEGIIALSSNYTLYADMSNRMMAVLSSFSPVQEVYSIDECFLDLQGFAQV--QLHSIG 120 Query: 134 QAIRHQVLTWVGVPVCVGMGATKKV 158 QA R +V W+G+PV VG+ ATK + Sbjct: 121 QAARARVRQWLGLPVGVGIAATKTL 145 >E6QDZ7.1 E6QDZ7_9ZZZZ DNA polymerase V, subunit C Length = 427 Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 89/145 (61%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMMQEL 73 ALVD NNFYVSCERVF P L RPVVVLSNNDGC VA S E +ALG+ M PWF +++L Sbjct: 3 IALVDANNFYVSCERVFRPDLEGRPVVVLSNNDGCVVARSAEVRALGVAMGTPWFQLKKL 62 Query: 74 ARQHGIVALSSNYTLYADMSNRVTQVLRQYSPRLEVYSIDESFLALDGLAGLWPSMSDMG 133 A++ G++ALSSNY+LYADMSNR+ +L +SP EVYSIDE FL L G A +S MG Sbjct: 63 AKREGVIALSSNYSLYADMSNRMMGILSSFSPIQEVYSIDECFLDLQGFAQ--DQLSSMG 120 Query: 134 QAIRHQVLTWVGVPVCVGMGATKKV 158 QA R +V WVG+PV VG+ ATK + Sbjct: 121 QAAREKVRQWVGLPVGVGIAATKTL 145