BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0011.p (227 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISL0.1 D8ISL0_HERSS Alanine racemase 2 EC=5.1.1.1 444 e-123 B1M861.1 B1M861_METRJ Alanine racemase 2 EC=5.1.1.1 201 8e-50 Q11LC5.1 Q11LC5_MESSB Alanine racemase 1 EC=5.1.1.1 195 5e-48 Q2W5H6.1 Q2W5H6_MAGSA Alanine racemase 195 5e-48 A9HMX6.1 A9HMX6_GLUDA Alanine racemase 2 EC=5.1.1.1 184 6e-45 P58737.1 ALR2_AGRT5 Alanine racemase, catabolic EC=5.1.1.1 184 6e-45 B5ZHK2.1 B5ZHK2_GLUDA Alanine racemase EC=5.1.1.1 184 6e-45 D7H6C1.1 D7H6C1_BRUAB Alanine racemase EC=5.1.1.1 183 2e-44 C9VNK0.1 C9VNK0_BRUAB Alanine racemase EC=5.1.1.1 183 2e-44 C9U8X1.1 C9U8X1_BRUAB Alanine racemase EC=5.1.1.1 183 2e-44 >D8ISL0.1 D8ISL0_HERSS Alanine racemase 2 EC=5.1.1.1 Length = 368 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/224 (97%), Positives = 221/224 (98%) Query: 1 MSTQPTASLTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREF 60 MSTQPTASLTIDLPAIVANWKTL ARVAPARCGAVVKADAYGLGATMVVRALLDAGCREF Sbjct: 1 MSTQPTASLTIDLPAIVANWKTLSARVAPARCGAVVKADAYGLGATMVVRALLDAGCREF 60 Query: 61 FVALVSEGVSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGY 120 FVALVSEGVSLKQTLA+RWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGY Sbjct: 61 FVALVSEGVSLKQTLADRWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGY 120 Query: 121 ARQLDFPLAAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPL 180 ARQLDFPLAAALQVDTGMARLGLAPAEVAQL SR+GLAGIAPTFLMSHLVSAEE+ANPL Sbjct: 121 ARQLDFPLAAALQVDTGMARLGLAPAEVAQLTESRAGLAGIAPTFLMSHLVSAEETANPL 180 Query: 181 NQHQLERFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 NQHQLERFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA Sbjct: 181 NQHQLERFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 >B1M861.1 B1M861_METRJ Alanine racemase 2 EC=5.1.1.1 Length = 377 Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 116/219 (52%), Positives = 134/219 (61%), Gaps = 4/219 (1%) Query: 6 TASLTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALV 65 +A LTIDL A+ N++ L AR A C AVVKADAYGLGA V L AGCR FFVA V Sbjct: 19 SALLTIDLAALAENYRLLAARAGTATCAAVVKADAYGLGADRVAPVLAAAGCRHFFVAQV 78 Query: 66 SEGVSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLD 125 EGV+L+ L GA + +LNG PG E C + L PVLN L Q+ WQG AR+ Sbjct: 79 GEGVALRSILG----PGAVIAVLNGAAPGSEATCADHDLVPVLNDLSQLDGWQGLARRRA 134 Query: 126 FPLAAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQL 185 L A LQVDTGMAR G AP EV L+ LAG+ +MSHL A E +P+N QL Sbjct: 135 RRLPAILQVDTGMARFGFAPDEVGALLDRPDALAGLDLRLVMSHLACAGEPDSPVNAAQL 194 Query: 186 ERFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 F A+RR P + LA SSGIFLG DFHF VRPGAA Sbjct: 195 SVFRAVRRRLPAVPASLAASSGIFLGPDFHFDLVRPGAA 233 >Q11LC5.1 Q11LC5_MESSB Alanine racemase 1 EC=5.1.1.1 Length = 385 Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 103/218 (47%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Query: 7 ASLTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALVS 66 A LT+DL A+ ANW L R A A C AVVKADAYGLGA V AL DAGCR FFVA + Sbjct: 9 AFLTVDLEAVTANWLLLAGRAAGAECAAVVKADAYGLGAAEVATALQDAGCRTFFVAHLE 68 Query: 67 EGVSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDF 126 EG+SL++TL G+R+ +LNGT P + LTPV+ ++ ++++W+ +A Sbjct: 69 EGLSLRRTLG----SGSRIFVLNGTPPDTQEEFGQAALTPVVGTINELQAWRKHAATKRG 124 Query: 127 PLAAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLE 186 P+ ALQ+DTGM+RLGL+P++V+ + + L GI +MSHL A+E + N+ Q Sbjct: 125 PIPVALQLDTGMSRLGLSPSDVSGIAADTTLLRGIHIELVMSHLACADEPGHSANESQRS 184 Query: 187 RFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 RF +RR P+ +ANSSG FLG FHF +RPGAA Sbjct: 185 RFQRLRRMLPQAPASIANSSGTFLGKGFHFSMIRPGAA 222 >Q2W5H6.1 Q2W5H6_MAGSA Alanine racemase Length = 409 Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 107/219 (48%), Positives = 138/219 (63%), Gaps = 5/219 (2%) Query: 6 TASLTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALV 65 TA LTID+ AIVANWK L A VAPA AVVKAD YGLG + AL AGCR FFVA V Sbjct: 46 TALLTIDVAAIVANWKRLSALVAPAEASAVVKADCYGLGMDRIAPALFAAGCRSFFVACV 105 Query: 66 SEGVSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLD 125 +EG++L++ L GA +H+L+G + GDE +GL PVLNSL Q+ W +A++ Sbjct: 106 NEGIALRRLL-----PGAMIHVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGS 160 Query: 126 FPLAAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQL 185 A A+ +DTGM+RLGL+ E+ +L LA + P +MSHL A++S +P+N QL Sbjct: 161 GAPAVAIHIDTGMSRLGLSEPELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQL 220 Query: 186 ERFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 + H P + +A SSGIFLG FH G VRPGAA Sbjct: 221 TTLRRLASHLPALPQSIAASSGIFLGRGFHLGMVRPGAA 259 >A9HMX6.1 A9HMX6_GLUDA Alanine racemase 2 EC=5.1.1.1 Length = 383 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 138/218 (63%), Gaps = 4/218 (1%) Query: 7 ASLTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALVS 66 A+LTIDL AI AN++T+ A A C AVVKADAYGLGA V AL + G R FFVA + Sbjct: 18 ATLTIDLDAIRANYRTVRNLAAGAECAAVVKADAYGLGAARVAPALQEEGARTFFVAHLD 77 Query: 67 EGVSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDF 126 EG++L++ ++ AR+ +L+G +PG E CLH L PVLNS++Q++ W+G A + Sbjct: 78 EGMALRRHVS----ADARIIVLHGAVPGAEKDCLHDDLIPVLNSVDQIQRWRGLAHEAGR 133 Query: 127 PLAAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLE 186 L + LQ+DTGM+R GL+ E+ +V GL GI ++SHL A++ +P + Q Sbjct: 134 ALPSILQLDTGMSRFGLSENEIRAIVADPDGLRGIDLRLVISHLACADDPDDPASTRQRA 193 Query: 187 RFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 R V +R P LA SSG+FLG DFHF VRPGAA Sbjct: 194 RLVRMRALLPPAPVSLAASSGVFLGRDFHFDLVRPGAA 231 >P58737.1 ALR2_AGRT5 Alanine racemase, catabolic EC=5.1.1.1 Length = 388 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 9 LTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALVSEG 68 LTIDL A+ N+ TL ++ AVVKADAYGLGA +V + L +AGCR FFVA + E Sbjct: 18 LTIDLGALRDNYLTLAGMAPASQTAAVVKADAYGLGADVVSQTLFEAGCRNFFVAHIDEA 77 Query: 69 VSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDFPL 128 ++L+ L+ + AR+ +LNG PG+E C +TPVLNSLEQ+ W +AR+L L Sbjct: 78 LALRLRLSAK----ARIFVLNGLQPGNETSCAAMAITPVLNSLEQIAQWSAHARELGKTL 133 Query: 129 AAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLERF 188 AA+Q+DTGM RLGL+P E+ L + L GI F+MSHL A+E + N QL Sbjct: 134 TAAVQIDTGMCRLGLSPEELEILSAKQQLLDGIEIAFVMSHLACADEPDHVSNAAQLAVM 193 Query: 189 VAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 +PE C +NS GIFLG D+H +RPG A Sbjct: 194 RKAATAFPETPVCFSNSGGIFLGNDYHNALLRPGIA 229 >B5ZHK2.1 B5ZHK2_GLUDA Alanine racemase EC=5.1.1.1 Length = 387 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 137/217 (63%), Gaps = 5/217 (2%) Query: 9 LTIDLPAIVANWKTLCARVAPAR-CGAVVKADAYGLGATMVVRALLDAGCREFFVALVSE 67 LTIDL A+ AN++ L RV P CGA VKADAYGLGA +V L +AGCR FFVA ++E Sbjct: 19 LTIDLDAVAANYRILRDRVGPRTICGAAVKADAYGLGAARIVPVLAEAGCRTFFVAHLAE 78 Query: 68 GVSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDFP 127 G +++ L A + +LNG +PG E +GL PVLNSLEQ+ W+ ARQ Sbjct: 79 GAAIRPLLG----TDATIFVLNGAMPGTEAALHEHGLVPVLNSLEQIARWRDLARQAGRD 134 Query: 128 LAAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLER 187 L AALQVD+GM+R GL+ A+V L LAGI P +MSHL A+E A+P N Q Sbjct: 135 LPAALQVDSGMSRFGLSDADVDALAARDGSLAGITPLLVMSHLACADEPAHPSNHAQRAA 194 Query: 188 FVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 F+ +R P LA SSG+F+G+D+HF VRPGAA Sbjct: 195 FLRLRARLPAAPASLAASSGLFMGSDWHFDMVRPGAA 231 >D7H6C1.1 D7H6C1_BRUAB Alanine racemase EC=5.1.1.1 Length = 399 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 9 LTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALVSEG 68 LTIDL A+ N+ + R+AP R AVVKADAYGLGA+ V A +AGCR+FFVA + E Sbjct: 21 LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80 Query: 69 VSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDFPL 128 V+LK L A L++LNG PG E C G+ PVLNSLEQV +W A +L L Sbjct: 81 VALKPFLK----PDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKL 136 Query: 129 AAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLERF 188 A LQ DTGM+RLGL+ E +L+ + + L+ I F +SHL + +E N +N QL + Sbjct: 137 PALLQFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKM 196 Query: 189 VAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 +A+ P++ LANS G FLG ++F RPG A Sbjct: 197 MALLARLPKLPAALANSGGTFLGKTYYFDLARPGIA 232 >C9VNK0.1 C9VNK0_BRUAB Alanine racemase EC=5.1.1.1 Length = 399 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 9 LTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALVSEG 68 LTIDL A+ N+ + R+AP R AVVKADAYGLGA+ V A +AGCR+FFVA + E Sbjct: 21 LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80 Query: 69 VSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDFPL 128 V+LK L A L++LNG PG E C G+ PVLNSLEQV +W A +L L Sbjct: 81 VALKPFLK----PDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKL 136 Query: 129 AAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLERF 188 A LQ DTGM+RLGL+ E +L+ + + L+ I F +SHL + +E N +N QL + Sbjct: 137 PALLQFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKM 196 Query: 189 VAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 +A+ P++ LANS G FLG ++F RPG A Sbjct: 197 MALLARLPKLPAALANSGGTFLGKTYYFDLARPGIA 232 >C9U8X1.1 C9U8X1_BRUAB Alanine racemase EC=5.1.1.1 Length = 399 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 9 LTIDLPAIVANWKTLCARVAPARCGAVVKADAYGLGATMVVRALLDAGCREFFVALVSEG 68 LTIDL A+ N+ + R+AP R AVVKADAYGLGA+ V A +AGCR+FFVA + E Sbjct: 21 LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80 Query: 69 VSLKQTLAERWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGYARQLDFPL 128 V+LK L A L++LNG PG E C G+ PVLNSLEQV +W A +L L Sbjct: 81 VALKPFLK----PDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKL 136 Query: 129 AAALQVDTGMARLGLAPAEVAQLVGSRSGLAGIAPTFLMSHLVSAEESANPLNQHQLERF 188 A LQ DTGM+RLGL+ E +L+ + + L+ I F +SHL + +E N +N QL + Sbjct: 137 PALLQFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKM 196 Query: 189 VAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAA 224 +A+ P++ LANS G FLG ++F RPG A Sbjct: 197 MALLARLPKLPAALANSGGTFLGKTYYFDLARPGIA 232