BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0090.p (774 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPD8.1 D8IPD8_HERSS Anaerobic formate dehydrogenase protein EC... 315 2e-83 B2TBL3.1 B2TBL3_BURPP Oxidoreductase alpha (Molybdopterin) subunit 206 1e-50 D5N6U2.1 D5N6U2_9BURK Oxidoreductase alpha (Molybdopterin) subunit 202 2e-49 A4YUX9.1 A4YUX9_BRASO Putative formate dehydrogenase (C-terminal... 199 1e-48 Q13MN1.1 Q13MN1_BURXL Oxidoreductase alpha (Molybdopterin) subunit 196 9e-48 D5WLZ2.1 D5WLZ2_BURSC Oxidoreductase alpha (Molybdopterin) subunit 189 1e-45 E8YTV8.1 E8YTV8_9BURK Oxidoreductase alpha (Molybdopterin) subun... 187 5e-45 C5AFN4.1 C5AFN4_BURGB Oxidoreductase alpha (Molybdopterin) subunit 186 2e-44 E1TDF2.1 E1TDF2_BURSG Oxidoreductase alpha (Molybdopterin) subun... 186 2e-44 F2LQ71.1 F2LQ71_BURGA NAD-dependent formate dehydrogenase alpha ... 184 5e-44 >D8IPD8.1 D8IPD8_HERSS Anaerobic formate dehydrogenase protein EC=1.2.1.2 Length = 790 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 144/147 (97%), Positives = 145/147 (98%) Query: 1 MKTKDIPEDATFDEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCS 60 MKTKDIPEDATFDEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCS Sbjct: 18 MKTKDIPEDATFDEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCS 77 Query: 61 WAKPADPHLFEFCENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPM 120 WAKPADPHLFEFCENGAKATAWEITRKRAT AFFAQHTVTEMEAWNDLELESSGRVTEPM Sbjct: 78 WAKPADPHLFEFCENGAKATAWEITRKRATAAFFAQHTVTEMEAWNDLELESSGRVTEPM 137 Query: 121 KYDAASDRYLPVSWSEAFDDIAARARA 147 KYDAASDRYLPVSWSEAFDDIAA+ RA Sbjct: 138 KYDAASDRYLPVSWSEAFDDIAAQLRA 164 >B2TBL3.1 B2TBL3_BURPP Oxidoreductase alpha (Molybdopterin) subunit Length = 788 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 92/133 (69%), Positives = 110/133 (82%) Query: 15 YNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEFCE 74 Y NAAGGWGSVKA+ SIL QEHV +G+RIL QNKP+GFACVSCSWAKPADPHLFEFCE Sbjct: 30 YRNAAGGWGSVKAVASILVQEHVTLNGSRILAKQNKPDGFACVSCSWAKPADPHLFEFCE 89 Query: 75 NGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPVSW 134 NGAKATAWEIT KR FFA HT++E+ AW+ LELES GR+T PM++D+A+DRY+P +W Sbjct: 90 NGAKATAWEITSKRVDADFFANHTLSELRAWSGLELESRGRLTTPMRWDSATDRYVPTTW 149 Query: 135 SEAFDDIAARARA 147 AF +IA+ +A Sbjct: 150 QHAFTEIASELQA 162 >D5N6U2.1 D5N6U2_9BURK Oxidoreductase alpha (Molybdopterin) subunit Length = 786 Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 91/134 (67%), Positives = 107/134 (79%) Query: 14 EYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEFC 73 EY NAAGGWGSVKA+ SIL QEHV +G+RIL QNKP+GFACVSCSWAKPADPHLFEFC Sbjct: 26 EYRNAAGGWGSVKAVASILVQEHVTLNGSRILSQQNKPDGFACVSCSWAKPADPHLFEFC 85 Query: 74 ENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPVS 133 ENGAKATAWEIT KR FFA HT++E+ +W+ ELES GR+T PM++DAA+DRY+ + Sbjct: 86 ENGAKATAWEITNKRINADFFAAHTLSELRSWSGFELESRGRLTAPMRWDAATDRYVQTT 145 Query: 134 WSEAFDDIAARARA 147 W AF IA +A Sbjct: 146 WEHAFAGIAKELQA 159 >A4YUX9.1 A4YUX9_BRASO Putative formate dehydrogenase (C-terminal), related to acid resistance with formate dehydrogenase/DMSO reductase, domains 1-3 and ADC-like domain Length = 761 Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 91/140 (65%), Positives = 104/140 (74%) Query: 8 EDATFDEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADP 67 E A +YN AGGWGSV+A+ SIL QE V G+ IL+ QNKP GF CVSCSWAKPA P Sbjct: 3 EKAKIQDYNAPAGGWGSVRAVASILTQEEVTLLGSEILLKQNKPGGFMCVSCSWAKPAQP 62 Query: 68 HLFEFCENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASD 127 H FEFCENGAKATAWEIT K P FFA+HT+TE+ W+D +LE GR+T PM+YDAASD Sbjct: 63 HPFEFCENGAKATAWEITGKTVGPEFFARHTLTELRTWSDHQLEEQGRLTHPMRYDAASD 122 Query: 128 RYLPVSWSEAFDDIAARARA 147 RYLPV W EAF I A +A Sbjct: 123 RYLPVGWDEAFGAIGAELKA 142 >Q13MN1.1 Q13MN1_BURXL Oxidoreductase alpha (Molybdopterin) subunit Length = 786 Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 89/134 (66%), Positives = 105/134 (78%) Query: 14 EYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEFC 73 EY NAAGGWGSVKA+ SIL QEHV +G+RIL QNK +GFACVSCSWAKPADPHLFEFC Sbjct: 26 EYRNAAGGWGSVKAVASILVQEHVTFNGSRILSQQNKADGFACVSCSWAKPADPHLFEFC 85 Query: 74 ENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPVS 133 ENGAKATAWEIT KR FFA HT++E+ +W+ ELES GR+T PM++DA +DRY+ + Sbjct: 86 ENGAKATAWEITNKRIDADFFAAHTLSELRSWSGFELESRGRLTAPMRWDATTDRYVQTT 145 Query: 134 WSEAFDDIAARARA 147 W AF IA +A Sbjct: 146 WEHAFAGIAKELQA 159 >D5WLZ2.1 D5WLZ2_BURSC Oxidoreductase alpha (Molybdopterin) subunit Length = 763 Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 82/132 (62%), Positives = 104/132 (78%) Query: 15 YNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEFCE 74 Y A+GGWGSVKA+ +IL +E +++LMHQNKP+GF CVSCSWAKPADPH FEFCE Sbjct: 10 YPYASGGWGSVKAVATILLREKAPLKDSQVLMHQNKPDGFMCVSCSWAKPADPHTFEFCE 69 Query: 75 NGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPVSW 134 +GAKATAW++T KR TP FF HTV+E+ W+D +LE +GR+TEP++YD A+DRY+PV W Sbjct: 70 SGAKATAWDLTAKRVTPDFFEVHTVSELAKWHDHDLEEAGRLTEPLRYDPATDRYVPVPW 129 Query: 135 SEAFDDIAARAR 146 +AFD I A R Sbjct: 130 QQAFDAIGAELR 141 >E8YTV8.1 E8YTV8_9BURK Oxidoreductase alpha (Molybdopterin) subunit EC=1.7.99.4 Length = 768 Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 83/142 (58%), Positives = 107/142 (75%), Gaps = 5/142 (3%) Query: 1 MKTKDIPEDATFDEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCS 60 MK KD D F A+GGWGS+KA+ +IL QEHV + L QNKP+GF CVSCS Sbjct: 1 MKEKDTTRDYPF-----ASGGWGSLKAVTTILAQEHVGVKDSAALRKQNKPDGFMCVSCS 55 Query: 61 WAKPADPHLFEFCENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPM 120 WAKPADPH+FEFCE+GAKATAW++T KR TP FF HTVTE+ +W+D +LE +GR+T P+ Sbjct: 56 WAKPADPHVFEFCESGAKATAWDLTSKRMTPEFFKLHTVTELLSWHDHDLEEAGRLTAPL 115 Query: 121 KYDAASDRYLPVSWSEAFDDIA 142 +YD+A+D+Y+ V W +AFD+I Sbjct: 116 RYDSATDKYVQVEWQQAFDEIG 137 >C5AFN4.1 C5AFN4_BURGB Oxidoreductase alpha (Molybdopterin) subunit Length = 777 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 84/135 (62%), Positives = 102/135 (75%) Query: 13 DEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEF 72 D Y + AGGWGS+KA+ +IL EH + G LM QNKP+GF CVSCSWAKPA PH FEF Sbjct: 23 DAYPHPAGGWGSMKAVVAILASEHAVRKGGAALMRQNKPDGFMCVSCSWAKPAGPHPFEF 82 Query: 73 CENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPV 132 CENGAKATAW+ T KR FFA H + E+E W+D +LE++GR+TEP++YDAASDRYLPV Sbjct: 83 CENGAKATAWDTTSKRVGADFFAAHPLAELETWHDHDLEAAGRLTEPLRYDAASDRYLPV 142 Query: 133 SWSEAFDDIAARARA 147 SW +AFD+I A Sbjct: 143 SWQQAFDEIGRELNA 157 >E1TDF2.1 E1TDF2_BURSG Oxidoreductase alpha (Molybdopterin) subunit EC=1.7.99.4 Length = 768 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 81/142 (57%), Positives = 107/142 (75%), Gaps = 5/142 (3%) Query: 1 MKTKDIPEDATFDEYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCS 60 MK KD +D F A+GGWGS++A+ +IL QEHV + L QNKP+GF CVSCS Sbjct: 1 MKEKDTTKDYPF-----ASGGWGSLRAVTTILAQEHVSVKDSAALAKQNKPDGFMCVSCS 55 Query: 61 WAKPADPHLFEFCENGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPM 120 WAKPADPH+FEFCE+GAKATAW++T KR TP FF HTVTE+ +W+D +LE +GR+T P+ Sbjct: 56 WAKPADPHVFEFCESGAKATAWDLTSKRMTPEFFQLHTVTELLSWHDHDLEEAGRLTAPL 115 Query: 121 KYDAASDRYLPVSWSEAFDDIA 142 +YD A+D+Y+ + W +AFD+I Sbjct: 116 RYDPATDKYVQIEWQQAFDEIG 137 >F2LQ71.1 F2LQ71_BURGA NAD-dependent formate dehydrogenase alpha subunit Length = 778 Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 83/128 (64%), Positives = 101/128 (78%) Query: 15 YNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEFCE 74 Y + +GGWGS+KA+ SIL EH + G LM QNKP+GF CVSCSWAKPA H FEFCE Sbjct: 24 YPHPSGGWGSMKAVVSILTSEHALRKGGAALMRQNKPDGFMCVSCSWAKPARAHPFEFCE 83 Query: 75 NGAKATAWEITRKRATPAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPVSW 134 NGAKATAW+ T KR AFFA+HTV E++ W+D +LE++GR+TEPM+YDAASDRYLPV W Sbjct: 84 NGAKATAWDATSKRVDAAFFARHTVAELDGWHDHDLEAAGRLTEPMRYDAASDRYLPVPW 143 Query: 135 SEAFDDIA 142 +AFD+I Sbjct: 144 QQAFDEIG 151