BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0061.p (241 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPB0.1 D8IPB0_HERSS Putative uncharacterized protein 482 e-134 A6SW73.1 A6SW73_JANMA Uncharacterized conserved protein 362 2e-98 A4G3E8.1 A4G3E8_HERAR Putative uncharacterized protein 358 5e-97 F1VXU7.1 F1VXU7_9BURK Ribosomal RNA small subunit methyltransfer... 329 2e-88 C3XCH1.1 C3XCH1_OXAFO Putative uncharacterized protein 278 5e-73 C3X6A3.1 C3X6A3_OXAFO Putative uncharacterized protein 250 1e-64 D5NJG2.1 D5NJG2_9BURK Putative uncharacterized protein 242 4e-62 Q13U67.1 Q13U67_BURXL Putative uncharacterized protein 241 6e-62 B1G7J2.1 B1G7J2_9BURK Putative uncharacterized protein 239 2e-61 Q1BZ89.1 Q1BZ89_BURCA 16S rRNA m(3)U-1498 methyltransferase EC=2... 239 3e-61 >D8IPB0.1 D8IPB0_HERSS Putative uncharacterized protein Length = 241 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 239/241 (99%), Positives = 240/241 (99%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGD ITLFNGEGGEYTATLSA+EKKRAH Sbjct: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDAITLFNGEGGEYTATLSAVEKKRAH 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER Sbjct: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA Sbjct: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 Query: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWGE 240 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWGE Sbjct: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWGE 240 Query: 241 L 241 L Sbjct: 241 L 241 >A6SW73.1 A6SW73_JANMA Uncharacterized conserved protein Length = 241 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 170/241 (70%), Positives = 202/241 (83%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRF+ PQ L IG+ + LP+ +AHHI V+RL GD ITLFNGEGGEYTAT++ IEKKR Sbjct: 1 MPRFYCPQPLAIGAVITLPDHVAHHIQVVRLGSGDHITLFNGEGGEYTATITTIEKKRVT 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 A++K F+PRE ELPYA+T+AQALPE +KMDWI+EKAVELG A+QPLA+QRCVVRLS ER Sbjct: 61 AEIKLFTPREVELPYAVTVAQALPEASKMDWIIEKAVELGVHAIQPLASQRCVVRLSAER 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 A KK HWQG+I AA+EQ GRNRL L E +F +W+ Q DLH+RILLSPR + LS WA Sbjct: 121 AAKKMQHWQGVIVAASEQSGRNRLAALAEPVDFNQWVQQKDLHKRILLSPRAEQSLSDWA 180 Query: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWGE 240 RHHPPQ+V L++GPEGGF+D+EE+LA AQGALMLSMG RVLRTETAGL+ALAALNAVWGE Sbjct: 181 RHHPPQSVALMIGPEGGFTDKEEDLALAQGALMLSMGPRVLRTETAGLSALAALNAVWGE 240 Query: 241 L 241 + Sbjct: 241 M 241 >A4G3E8.1 A4G3E8_HERAR Putative uncharacterized protein Length = 241 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 171/241 (70%), Positives = 197/241 (81%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRF+ PQAL IG+ + LPE +AHHI V+RL GD ITLFNGEGGEYTAT+S IEKKR Sbjct: 1 MPRFYCPQALVIGAVVTLPEHVAHHIQVIRLSAGDAITLFNGEGGEYTATISTIEKKRVT 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 A++K F PRE ELPYA+TLAQALPE +KMDWI+EKAVELGA ALQPLA+QRCVVRLS ER Sbjct: 61 AEIKIFEPREVELPYAITLAQALPEASKMDWIIEKAVELGAHALQPLASQRCVVRLSAER 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 A KK HWQGII AA+EQ GRNRL L E +F +W Q DLH RI+LSPR + LS WA Sbjct: 121 AAKKMQHWQGIIIAASEQSGRNRLTTLAEPADFNQWATQQDLHVRIMLSPRAEQSLSDWA 180 Query: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWGE 240 RHHPPQ+V L++GPEGGF+++EE A A GALMLSMG RVLRTETAG+AA+AALNAVWG Sbjct: 181 RHHPPQSVALMIGPEGGFTEKEETQAIANGALMLSMGPRVLRTETAGMAAIAALNAVWGA 240 Query: 241 L 241 + Sbjct: 241 M 241 >F1VXU7.1 F1VXU7_9BURK Ribosomal RNA small subunit methyltransferase E Length = 242 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/240 (67%), Positives = 191/240 (79%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRFH P L IG LVLP+ +AHHI V+RLQ G +TLFNG+G EY ATLS +EKKR Sbjct: 1 MPRFHCPLPLAIGDILVLPDNVAHHIQVIRLQAGSMVTLFNGDGNEYVATLSVLEKKRVT 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 ++KT + R ELPYA+TLAQALPE +KMDWI+EKAVELGA +QPL+AQRCVVRLS ER Sbjct: 61 VEIKTCTERSVELPYAITLAQALPEASKMDWIIEKAVELGAAGIQPLSAQRCVVRLSAER 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 AEK+Q HWQGII +A+EQ GRNRL L V++F RWIAQ D+H+RILL+PR + L+ WA Sbjct: 121 AEKRQLHWQGIIVSASEQSGRNRLAQLAPVSDFSRWIAQQDIHKRILLTPRADQSLADWA 180 Query: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWGE 240 RH PPQAVTL++GPEGG SD+EE LA A GA+ LSMG RVLRTETAGLAALA L WG+ Sbjct: 181 RHQPPQAVTLLIGPEGGLSDDEENLAIAHGAIALSMGPRVLRTETAGLAALAMLAGAWGD 240 >C3XCH1.1 C3XCH1_OXAFO Putative uncharacterized protein Length = 242 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 130/238 (54%), Positives = 173/238 (72%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 M R L +G+++ LP++ + HI VLRL G+ I LFNGEGGEY+A + ++++ + + Sbjct: 1 MTRLFCDFPLVVGTNIDLPKETSRHIQVLRLTEGNEIVLFNGEGGEYSARIISLDRTKTN 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 ++ + RE ELPY +TLAQALPE KMDWI+EKAVELGA +QPLAAQR VVRL+ +R Sbjct: 61 VKILSRHDREVELPYDITLAQALPEAGKMDWIIEKAVELGAAGIQPLAAQRSVVRLNADR 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 AEK+ A WQ I+ AA+EQCGRN L + E F +I S R++ +PR E LSGWA Sbjct: 121 AEKRLARWQTIVTAASEQCGRNTLMEISEPVAFNTFIDNSGGCLRVMFTPRATETLSGWA 180 Query: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVW 238 R PQA+T+++GPEGGFS EEEELA G + LSMGSR+LRTETAG+AA++A+NA+W Sbjct: 181 RKQAPQAITIMIGPEGGFSPEEEELAIQNGVIPLSMGSRILRTETAGMAAISAINAIW 238 >C3X6A3.1 C3X6A3_OXAFO Putative uncharacterized protein Length = 243 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 120/238 (50%), Positives = 161/238 (67%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 M R L +G+ L LP+ A HI V+RL G+ ITLFNG+GGEY A + + R Sbjct: 1 MTRLFCDFPLAVGACLDLPKDTARHIMVVRLSRGEAITLFNGQGGEYRARILETGRNRVR 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 A++ +FSP E ELPY ++L Q +PE KMDWI+EKA ELG + PLA QR VVR++ +R Sbjct: 61 AEIVSFSPHEVELPYEISLVQGIPEAGKMDWIIEKAAELGVHRIVPLATQRSVVRVNADR 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGWA 180 EK+ A WQ I+ +A+EQCGRNRL +G+ F ++ S +I+ SPR + L+ WA Sbjct: 121 IEKRLARWQSIVVSASEQCGRNRLLAIGQPVNFDAYLQNSPEPSKIMFSPRASHSLASWA 180 Query: 181 RHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVW 238 P A++L++GPEGGFS EEEELA +G LSMG R+LRTETAGLAA++A+NA+W Sbjct: 181 TGQKPHAISLLIGPEGGFSAEEEELARQKGVTFLSMGPRILRTETAGLAAVSAINAIW 238 >D5NJG2.1 D5NJG2_9BURK Putative uncharacterized protein Length = 246 Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 126/246 (51%), Positives = 159/246 (64%), Gaps = 9/246 (3%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRF + L + LP+ + H+ VLRLQPGD+I LFNGEGGEY+A L +E++ A Sbjct: 1 MPRFFVGTPLQSDDIMQLPDDVVRHVLVLRLQPGDSIVLFNGEGGEYSAELVEVERRSAK 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 +++ F E E PY LTLAQ + G KMDW++EKAVELGA+A PL R VVRLSGER Sbjct: 61 VRIREFRNIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASAFVPLTTTRSVVRLSGER 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIA-------QSDLHRRILLSPRGA 173 A+++ AHWQGI+ A+ EQCGRNRLP + V E W+ + DL RILLSPR + Sbjct: 121 AQRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGAMPRTPEEGDL--RILLSPRAS 178 Query: 174 EPLSGWARHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAA 233 S P VT++VGPEGGFS EE A G + +G RV+RTETAG+A L+A Sbjct: 179 ISFSALPAEPPQGRVTVLVGPEGGFSAAEEAAATDHGFTAVGLGPRVMRTETAGIAVLSA 238 Query: 234 LNAVWG 239 L A WG Sbjct: 239 LAAGWG 244 >Q13U67.1 Q13U67_BURXL Putative uncharacterized protein Length = 251 Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 125/246 (50%), Positives = 159/246 (64%), Gaps = 9/246 (3%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRF + L + LP+ + H+ VLRLQPGD+I LFNGEGGEY+A L +E++ A Sbjct: 6 MPRFFVGTPLQSDDIMQLPDDVVRHVLVLRLQPGDSIVLFNGEGGEYSAELVEVERRSAK 65 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 +++ F E E PY LTLAQ + G KMDW++EKAVELGA+A PL R VVRL+GER Sbjct: 66 VRIREFRNIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASAFVPLTTTRSVVRLTGER 125 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIA-------QSDLHRRILLSPRGA 173 A+++ AHWQGI+ A+ EQCGRNRLP + V E W+ + DL RILLSPR + Sbjct: 126 AQRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGAMPRTPEEGDL--RILLSPRAS 183 Query: 174 EPLSGWARHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAA 233 S P VT++VGPEGGFS EE A G + +G RV+RTETAG+A L+A Sbjct: 184 ISFSALPAEPPQGRVTVLVGPEGGFSAAEEAAATDHGFTAVGLGPRVMRTETAGIAVLSA 243 Query: 234 LNAVWG 239 L A WG Sbjct: 244 LAAGWG 249 >B1G7J2.1 B1G7J2_9BURK Putative uncharacterized protein Length = 246 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 123/244 (50%), Positives = 159/244 (65%), Gaps = 5/244 (2%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 MPRF + +L + LP+ + H+ VLRLQ GD+I LFNGEGGEY+A L+AIE++ Sbjct: 1 MPRFFVGTSLSPDDIVQLPDDVVRHVLVLRLQVGDSIVLFNGEGGEYSAELAAIERRAVT 60 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 +++ F E E PY LTLAQ + G KMDW++EKAVELGA++ PL R VVRL+GER Sbjct: 61 VKIREFRDIEVETPYRLTLAQGIASGDKMDWLIEKAVELGASSFVPLTTTRSVVRLAGER 120 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQ-----SDLHRRILLSPRGAEP 175 A ++ AHW+GI+ A+ EQCGRNRLP + V E W++ + RILLSPR + P Sbjct: 121 AARRHAHWEGIVRASCEQCGRNRLPEVMPVREIATWLSAMPRVPAGDELRILLSPRASIP 180 Query: 176 LSGWARHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALN 235 S P VT++VGPEGGFS EE A G + +G RVLRTETAG+A L+AL Sbjct: 181 FSALPAAPPKGPVTVLVGPEGGFSAAEEAAAMDHGFQAVGLGPRVLRTETAGMAVLSALA 240 Query: 236 AVWG 239 A WG Sbjct: 241 AGWG 244 >Q1BZ89.1 Q1BZ89_BURCA 16S rRNA m(3)U-1498 methyltransferase EC=2.1.1.- Length = 262 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 128/244 (52%), Positives = 164/244 (67%), Gaps = 5/244 (2%) Query: 1 MPRFHLPQALGIGSDLVLPEQIAHHIHVLRLQPGDTITLFNGEGGEYTATLSAIEKKRAH 60 +PRF + AL + L LP +A H+ VLRLQPGD + LF+G GG+Y A L ++K+ A Sbjct: 17 VPRFFVDAALRADATLALPADVARHVQVLRLQPGDVLALFDGTGGQYRARLVEVDKRSAL 76 Query: 61 AQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGER 120 QV TF P EAE PY +TLAQ + G KMDW++EKAVELG A+ PL+ R VV+LSGER Sbjct: 77 VQVDTFEPAEAEPPYRVTLAQGIAGGDKMDWVIEKAVELGVAAVVPLSTARGVVKLSGER 136 Query: 121 AEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWI-----AQSDLHRRILLSPRGAEP 175 A+K+ AHW+G++ A+ EQCGRNR+P + V F W+ A +D R+LLSPR + P Sbjct: 137 ADKRVAHWRGVVRASCEQCGRNRVPDVAPVAGFNAWLDALPAAPADGELRLLLSPRASSP 196 Query: 176 LSGWARHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALN 235 + P AVTL++GPEGG S +EE A A+G LS+G RVLRTETAG A LAAL Sbjct: 197 FASLPDAPPAAAVTLLIGPEGGLSPDEEHAARARGFTALSLGPRVLRTETAGAAVLAALA 256 Query: 236 AVWG 239 A WG Sbjct: 257 ARWG 260