BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0044.p (80 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IP94.1 D8IP94_HERSS ATP-dependent Clp protease adapter protein... 169 1e-40 F1VYF5.1 F1VYF5_9BURK ATP-dependent Clp protease adaptor protein... 161 3e-38 A4G7T9.1 CLPS_HERAR ATP-dependent Clp protease adapter protein ClpS 155 3e-36 A6T108.1 CLPS_JANMA ATP-dependent Clp protease adapter protein ClpS 154 3e-36 B5SHF8.1 B5SHF8_RALSO ATP-dependent Clp protease adapter protein... 147 4e-34 B5S126.1 B5S126_RALSO ATP-dependent Clp protease adapter protein... 147 4e-34 A3RQK6.1 A3RQK6_RALSO ATP-dependent Clp protease adapter protein... 147 4e-34 C6BCD4.1 C6BCD4_RALP1 ATP-dependent Clp protease adapter protein... 147 6e-34 E2T0C7.1 E2T0C7_9RALS ATP-dependent Clp protease adapter protein... 147 6e-34 B2UAR2.1 CLPS_RALPJ ATP-dependent Clp protease adapter protein ClpS 147 6e-34 >D8IP94.1 D8IP94_HERSS ATP-dependent Clp protease adapter protein ClpS Length = 104 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/80 (100%), Positives = 80/80 (100%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE Sbjct: 25 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 84 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LVLTHARKAGHPLQCVMEEA Sbjct: 85 LVLTHARKAGHPLQCVMEEA 104 >F1VYF5.1 F1VYF5_9BURK ATP-dependent Clp protease adaptor protein ClpS Length = 102 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 75/80 (93%), Positives = 77/80 (96%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MYQV LLNDDYTPMEFVVA+IQ+YFNKDRE ATQIML VHRDGKGMCGVYPKDIASTKVE Sbjct: 23 MYQVYLLNDDYTPMEFVVAIIQEYFNKDRENATQIMLMVHRDGKGMCGVYPKDIASTKVE 82 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LVLTHARKAGHPLQCVMEEA Sbjct: 83 LVLTHARKAGHPLQCVMEEA 102 >A4G7T9.1 CLPS_HERAR ATP-dependent Clp protease adapter protein ClpS Length = 102 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 71/79 (89%), Positives = 76/79 (96%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MYQVLLLNDDYTPMEFVV ++Q+YF+KDRETATQIML VHRDGKG+CGVYPKDIASTKVE Sbjct: 23 MYQVLLLNDDYTPMEFVVMILQEYFSKDRETATQIMLMVHRDGKGICGVYPKDIASTKVE 82 Query: 61 LVLTHARKAGHPLQCVMEE 79 LVL HARKAGHPLQCVMEE Sbjct: 83 LVLNHARKAGHPLQCVMEE 101 >A6T108.1 CLPS_JANMA ATP-dependent Clp protease adapter protein ClpS Length = 102 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 71/79 (89%), Positives = 76/79 (96%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MYQVLLLNDDYTPMEFVV ++Q+YF+KDRETATQIML VHRDGKG+CGVYPKDIASTKVE Sbjct: 23 MYQVLLLNDDYTPMEFVVLILQEYFSKDRETATQIMLMVHRDGKGICGVYPKDIASTKVE 82 Query: 61 LVLTHARKAGHPLQCVMEE 79 LVL HARKAGHPLQCVMEE Sbjct: 83 LVLNHARKAGHPLQCVMEE 101 >B5SHF8.1 B5SHF8_RALSO ATP-dependent Clp protease adapter protein ClpS Length = 108 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 66/80 (82%), Positives = 76/80 (95%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MY+VLLLNDDYTPMEFVV ++QQYF+KDRETATQIML VHR+GKG+CG+Y +DIA+TKVE Sbjct: 29 MYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGIYTRDIAATKVE 88 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LV THAR+AGHPLQCVMEEA Sbjct: 89 LVSTHARQAGHPLQCVMEEA 108 >B5S126.1 B5S126_RALSO ATP-dependent Clp protease adapter protein ClpS 2 Length = 108 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 66/80 (82%), Positives = 76/80 (95%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MY+VLLLNDDYTPMEFVV ++QQYF+KDRETATQIML VHR+GKG+CG+Y +DIA+TKVE Sbjct: 29 MYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGIYTRDIAATKVE 88 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LV THAR+AGHPLQCVMEEA Sbjct: 89 LVSTHARQAGHPLQCVMEEA 108 >A3RQK6.1 A3RQK6_RALSO ATP-dependent Clp protease adapter protein ClpS Length = 108 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 66/80 (82%), Positives = 76/80 (95%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MY+VLLLNDDYTPMEFVV ++QQYF+KDRETATQIML VHR+GKG+CG+Y +DIA+TKVE Sbjct: 29 MYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGIYTRDIAATKVE 88 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LV THAR+AGHPLQCVMEEA Sbjct: 89 LVSTHARQAGHPLQCVMEEA 108 >C6BCD4.1 C6BCD4_RALP1 ATP-dependent Clp protease adapter protein ClpS Length = 108 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 66/80 (82%), Positives = 76/80 (95%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MY+VLLLNDDYTPMEFVV ++QQYF+KDRETATQIML VHR+GKG+CG+Y +DIA+TKVE Sbjct: 29 MYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLYTRDIAATKVE 88 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LV THAR+AGHPLQCVMEEA Sbjct: 89 LVSTHARQAGHPLQCVMEEA 108 >E2T0C7.1 E2T0C7_9RALS ATP-dependent Clp protease adapter protein ClpS Length = 108 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 66/80 (82%), Positives = 76/80 (95%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MY+VLLLNDDYTPMEFVV ++QQYF+KDRETATQIML VHR+GKG+CG+Y +DIA+TKVE Sbjct: 29 MYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLYTRDIAATKVE 88 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LV THAR+AGHPLQCVMEEA Sbjct: 89 LVSTHARQAGHPLQCVMEEA 108 >B2UAR2.1 CLPS_RALPJ ATP-dependent Clp protease adapter protein ClpS Length = 108 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 66/80 (82%), Positives = 76/80 (95%) Query: 1 MYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVYPKDIASTKVE 60 MY+VLLLNDDYTPMEFVV ++QQYF+KDRETATQIML VHR+GKG+CG+Y +DIA+TKVE Sbjct: 29 MYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLYTRDIAATKVE 88 Query: 61 LVLTHARKAGHPLQCVMEEA 80 LV THAR+AGHPLQCVMEEA Sbjct: 89 LVSTHARQAGHPLQCVMEEA 108