BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0038.p (88 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IP89.1 D8IP89_HERSS 30S ribosomal protein S20 162 1e-38 F1VX09.1 F1VX09_9BURK SSU ribosomal protein S20p 149 9e-35 D9SHJ8.1 D9SHJ8_GALCS 30S ribosomal protein S20 134 4e-30 A6T112.1 RS20_JANMA 30S ribosomal protein S20 134 4e-30 Q46XK7.1 RS20_CUPPJ 30S ribosomal protein S20 134 5e-30 C7RRJ2.1 C7RRJ2_ACCPU 30S ribosomal protein S20 133 7e-30 C4KA54.1 C4KA54_THASP 30S ribosomal protein S20 133 8e-30 A4G7U3.1 RS20_HERAR 30S ribosomal protein S20 133 1e-29 B3R6B3.1 B3R6B3_CUPTR 30S ribosomal protein S20 132 2e-29 A1K7K2.1 RS20_AZOSB 30S ribosomal protein S20 131 3e-29 >D8IP89.1 D8IP89_HERSS 30S ribosomal protein S20 Length = 88 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/88 (100%), Positives = 88/88 (100%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS Sbjct: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 IADKKIIHKNKAARHKSRLAAALKALAA Sbjct: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 >F1VX09.1 F1VX09_9BURK SSU ribosomal protein S20p Length = 87 Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 78/87 (89%), Positives = 81/87 (93%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKA+RKAI GDKA AT VFQSS+S ID Sbjct: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAIRKAIEGGDKAVATQVFQSSISVIDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 IADKKIIHKNKAARHKSR+AAALKALA Sbjct: 61 IADKKIIHKNKAARHKSRMAAALKALA 87 >D9SHJ8.1 D9SHJ8_GALCS 30S ribosomal protein S20 Length = 87 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/87 (81%), Positives = 79/87 (90%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQAVKQNAHNSS RS LRTAIK V KAI AGDK AA SV++ SVST+DS Sbjct: 1 MANSAQARKRARQAVKQNAHNSSLRSELRTAIKRVIKAIEAGDKTAAQSVYRDSVSTVDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 IADKKIIHKNKA+RHKSRL+AA+KA+A Sbjct: 61 IADKKIIHKNKASRHKSRLSAAIKAMA 87 >A6T112.1 RS20_JANMA 30S ribosomal protein S20 Length = 87 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/78 (91%), Positives = 73/78 (93%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MANTAQARKRARQAVKQNAHNSSQRSTLRTA+KAVRKAI AGDKAAA VF +SVSTID Sbjct: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAVKAVRKAIEAGDKAAAAQVFLASVSTIDR 60 Query: 61 IADKKIIHKNKAARHKSR 78 IADKKIIHKNKAARHKSR Sbjct: 61 IADKKIIHKNKAARHKSR 78 >Q46XK7.1 RS20_CUPPJ 30S ribosomal protein S20 Length = 88 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/88 (80%), Positives = 81/88 (92%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQAV QNAHNSS RS LRTA+KAVRKAI AGDKAAA +F++S +TIDS Sbjct: 1 MANSAQARKRARQAVAQNAHNSSLRSRLRTAVKAVRKAIDAGDKAAAAEIFKNSQATIDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 IADKKI+HKNKAARHKSRL+AA+KA+AA Sbjct: 61 IADKKIVHKNKAARHKSRLSAAIKAMAA 88 >C7RRJ2.1 C7RRJ2_ACCPU 30S ribosomal protein S20 Length = 88 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 71/88 (80%), Positives = 79/88 (89%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQAVKQ AHN+S RSTLRTA+K V+KAI AGDKAAA S+F+ SVSTID Sbjct: 1 MANSAQARKRARQAVKQRAHNASLRSTLRTAVKRVQKAIVAGDKAAAQSIFRESVSTIDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 IADKKIIHKNKA+RHKSRLAA +K LAA Sbjct: 61 IADKKIIHKNKASRHKSRLAAQIKGLAA 88 >C4KA54.1 C4KA54_THASP 30S ribosomal protein S20 Length = 88 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 72/88 (81%), Positives = 80/88 (90%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQA K AHN+S RS LRTAIKAVRKAI GDKAAA SVF++S+STIDS Sbjct: 1 MANSAQARKRARQATKARAHNASLRSRLRTAIKAVRKAIVGGDKAAAQSVFRTSMSTIDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 IADKKIIHKNKAARHKSRL+AA+KA+AA Sbjct: 61 IADKKIIHKNKAARHKSRLSAAVKAMAA 88 >A4G7U3.1 RS20_HERAR 30S ribosomal protein S20 Length = 87 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/78 (89%), Positives = 72/78 (92%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MANTAQARKRARQAVKQNAHNSSQRSTLRTA+KAVRKAI AGDK AA VF +SVSTID Sbjct: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAVKAVRKAIEAGDKTAAAQVFLASVSTIDR 60 Query: 61 IADKKIIHKNKAARHKSR 78 IADKKIIHKNKAARHKSR Sbjct: 61 IADKKIIHKNKAARHKSR 78 >B3R6B3.1 B3R6B3_CUPTR 30S ribosomal protein S20 Length = 88 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/88 (79%), Positives = 80/88 (90%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQAV QNAHNSS RS LRTA+KAVRKAI AGDKAAA +F++S + IDS Sbjct: 1 MANSAQARKRARQAVAQNAHNSSLRSRLRTAVKAVRKAIDAGDKAAAAEIFKNSQAVIDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 IADKKI+HKNKAARHKSRL+AA+KA+AA Sbjct: 61 IADKKIVHKNKAARHKSRLSAAIKAMAA 88 >A1K7K2.1 RS20_AZOSB 30S ribosomal protein S20 Length = 88 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/88 (79%), Positives = 80/88 (90%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQA K AHN+S RS LRTAIKAVRKAI GDKAAA +VF++S+STIDS Sbjct: 1 MANSAQARKRARQATKARAHNASLRSRLRTAIKAVRKAIVGGDKAAAQAVFRTSMSTIDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 +ADKKIIHKNKAARHKSRL+AA+KA+AA Sbjct: 61 VADKKIIHKNKAARHKSRLSAAVKAMAA 88