BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0032.p (231 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IP84.1 D8IP84_HERSS Cytochrome c553 protein 407 e-112 A6T2L4.1 A6T2L4_JANMA Probable cytochrome C 254 5e-66 A6GSF1.1 A6GSF1_9BURK Probable cytochrome-c oxidase protein 254 7e-66 A4G8V2.1 A4G8V2_HERAR Putative cytochrome c4 250 1e-64 E5UGI9.1 E5UGI9_ALCXX Cytochrome c class I 250 1e-64 D5WCM3.1 D5WCM3_BURSC Putative periplasmic cytochrome c 246 2e-63 Q7WEX1.1 Q7WEX1_BORBR Probable cytochrome C 246 2e-63 A2SDS7.1 A2SDS7_METPP Putative cytochrome c 245 3e-63 C9Y8S4.1 C9Y8S4_9BURK Putative uncharacterized protein 245 3e-63 D4X4L3.1 D4X4L3_9BURK Cytochrome c family protein 245 3e-63 >D8IP84.1 D8IP84_HERSS Cytochrome c553 protein Length = 252 Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/231 (97%), Positives = 227/231 (98%) Query: 1 MACSLAAAAAPETAPAAPAAIAGMAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLN 60 MACSLAAAAAPE APAAPAAIAGMAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLN Sbjct: 22 MACSLAAAAAPEAAPAAPAAIAGMAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLN 81 Query: 61 QLQSFRDGQRRYPMMNYLLANLSDDYLQQIARFFADQHPPYPPPASNEASATVLERGRRL 120 QLQSFRDGQRRYPMMNYLLANLSDDYLQQIARFFADQHPPYPPPASNEASATVLERGRRL Sbjct: 82 QLQSFRDGQRRYPMMNYLLANLSDDYLQQIARFFADQHPPYPPPASNEASATVLERGRRL 141 Query: 121 VTEGDPQRRLPACVACHAPSLGGVQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMA 180 VTEGDPQRRLPAC ACHAPSLGGVQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMA Sbjct: 142 VTEGDPQRRLPACAACHAPSLGGVQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMA 201 Query: 181 AVARALSPEEINAASSWLSAQAVPTDYAPAPTLPAPLPQQCGSQPQSGVQR 231 AVARALSPEEINAASSWLSAQAVP DYAPAP LP+PLPQQCGSQPQSGVQR Sbjct: 202 AVARALSPEEINAASSWLSAQAVPADYAPAPALPSPLPQQCGSQPQSGVQR 252 >A6T2L4.1 A6T2L4_JANMA Probable cytochrome C Length = 243 Score = 254 bits (650), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 113/200 (56%), Positives = 152/200 (76%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 +A+R+AAC CHGK+GRA +DGYYPRIAGKP YL NQL +FRDG+R YP+M +L N+S Sbjct: 41 IAQRVAACVVCHGKEGRAGSDGYYPRIAGKPAGYLYNQLINFRDGKRTYPVMTAMLENMS 100 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 D YL++IA++F++QHPPYP P + +++ LERGRRLV +GD + +PACVACH+ + G Sbjct: 101 DAYLREIAQYFSEQHPPYPEPQAAQSNPAELERGRRLVHDGDKAKGIPACVACHSAKMTG 160 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 P IPGL+GLPRDY+ Q+GAW+ G R A PDCMA + + +S E+I+AA++WLS Q V Sbjct: 161 TAPAIPGLIGLPRDYLLGQIGAWKIGTRHAAQPDCMADIVKKMSAEDISAAAAWLSEQRV 220 Query: 204 PTDYAPAPTLPAPLPQQCGS 223 P D +PAP + A LP +CG Sbjct: 221 PADASPAPAITAKLPLECGK 240 >A6GSF1.1 A6GSF1_9BURK Probable cytochrome-c oxidase protein Length = 636 Score = 254 bits (649), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 118/206 (57%), Positives = 154/206 (74%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 MA R+ AC ACHG +GRA+A+GYYPRIAGKPE YL NQL +FRDG R++ MN ++ +LS Sbjct: 31 MANRVQACVACHGAEGRASAEGYYPRIAGKPEGYLYNQLIAFRDGGRQHAAMNGIVQHLS 90 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 +DYLQQ+AR+FA Q+PPYP P + ASA LE+G+RLV +G P +++PAC ACH +L G Sbjct: 91 NDYLQQMARYFAAQNPPYPAPVKSTASAAELEQGKRLVFDGVPSKKIPACAACHGQALTG 150 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 V+P PGLLGLPRDY+NAQLG WRNG R A PDCM A+ +ALSPE++N A+++L+AQ V Sbjct: 151 VEPYTPGLLGLPRDYLNAQLGKWRNGQRQAADPDCMHALVKALSPEQLNTATAYLAAQPV 210 Query: 204 PTDYAPAPTLPAPLPQQCGSQPQSGV 229 P + AP P +CG+ + V Sbjct: 211 PENPKAAPANSIQFPLKCGTHTTTAV 236 >A4G8V2.1 A4G8V2_HERAR Putative cytochrome c4 Length = 238 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 111/200 (55%), Positives = 147/200 (73%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 +A+R+AAC CHGK+GRA +DGYYPRIAGKP YL NQL +FRDG+R YP+M +L N+S Sbjct: 36 IAQRVAACVVCHGKEGRAGSDGYYPRIAGKPAGYLYNQLINFRDGKRTYPVMTAMLENMS 95 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 D YL++IA++F+DQHPPYP P +++ LERGR LV +GD + +PACVACH+ + G Sbjct: 96 DAYLREIAQYFSDQHPPYPEPQPTQSNPAELERGRVLVHDGDKAKGIPACVACHSAKMTG 155 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 P IPGL+GLPRDY+ Q+GAW+ G R A PDCMA + + +S +I+A ++WLS Q V Sbjct: 156 TAPAIPGLVGLPRDYLLGQIGAWKIGTRHAAAPDCMAEIVKKMSATDISAVTAWLSGQRV 215 Query: 204 PTDYAPAPTLPAPLPQQCGS 223 P D +PAP L LP +CG Sbjct: 216 PADASPAPALKTRLPLECGK 235 >E5UGI9.1 E5UGI9_ALCXX Cytochrome c class I Length = 251 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 148/203 (72%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 MA R+AACTACHG+QGRA ADGYYPR+AGKP+ YL +QL +FRD +R+Y M +LLA L Sbjct: 48 MAARVAACTACHGEQGRAGADGYYPRLAGKPQEYLYHQLLNFRDDRRQYRPMAHLLAGLP 107 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 D YL ++A +FA QH PYPPP E SA LE GRRL GD R LPAC +CH SLGG Sbjct: 108 DAYLHEMAGYFAAQHVPYPPPVRAEVSAATLEAGRRLALGGDAARGLPACASCHGASLGG 167 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 + P +PGLLGLPRDYI++Q+G+W+NG R A PDCMA VA L+P +I A ++WLS+Q V Sbjct: 168 LLPAVPGLLGLPRDYISSQIGSWKNGLRRAAAPDCMADVAHKLTPADIGALAAWLSSQPV 227 Query: 204 PTDYAPAPTLPAPLPQQCGSQPQ 226 DYAP P LP +CGSQ Q Sbjct: 228 ADDYAPEPAGSLRLPAECGSQAQ 250 >D5WCM3.1 D5WCM3_BURSC Putative periplasmic cytochrome c Length = 243 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 118/220 (53%), Positives = 150/220 (68%), Gaps = 3/220 (1%) Query: 7 AAAAPETAPAAPAAIAGMAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFR 66 +AA +T P AP M R+ CTACHG G+ T + Y+PR+AGKP YL NQLQ+FR Sbjct: 27 SAAKAQTQPKAPDT---MEARVQGCTACHGSHGQGTDNDYFPRLAGKPAGYLFNQLQNFR 83 Query: 67 DGQRRYPMMNYLLANLSDDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDP 126 +G+R+YP MNYL+ LSDDYL QIA FF+ Q PPYP PA ASAT L RG ++V GD Sbjct: 84 EGRRKYPPMNYLVTYLSDDYLHQIATFFSQQRPPYPTPAKPTASATTLARGEQIVLHGDA 143 Query: 127 QRRLPACVACHAPSLGGVQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARAL 186 +++PACVACH +L G++P IPGL+GL DYI+AQLG+WR+G R A PDCM +A L Sbjct: 144 NKQVPACVACHGKALTGMEPAIPGLVGLHADYISAQLGSWRSGTRRAIAPDCMHTIATRL 203 Query: 187 SPEEINAASSWLSAQAVPTDYAPAPTLPAPLPQQCGSQPQ 226 S E++NA ++WL+ Q P + PAP P CGS PQ Sbjct: 204 SDEDVNAVAAWLATQQAPQNPVPAPARSLKTPLACGSAPQ 243 >Q7WEX1.1 Q7WEX1_BORBR Probable cytochrome C Length = 250 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 120/201 (59%), Positives = 148/201 (73%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 MA R+AACTACHG+QGRA DGYYPR+AGKP+ YL +QL +FRD +R+YP M +LL L Sbjct: 47 MAARVAACTACHGEQGRAGPDGYYPRLAGKPQDYLYHQLLNFRDARRQYPPMAHLLNGLP 106 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 D YL+++A +FA Q PYPPPA EASA ++ERGR LV EGDP R +P+C +CH SL G Sbjct: 107 DAYLREMAAYFAGQDVPYPPPARVEASAALVERGRLLVREGDPARAIPSCASCHGASLAG 166 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 V P IPGLLGLPRDY+ AQ+G+W+NG R A PDCMA V+ L+PE+I A S+WL+ Q V Sbjct: 167 VAPAIPGLLGLPRDYLVAQIGSWQNGLRRAAEPDCMAQVSLKLTPEDIGAVSAWLAGQPV 226 Query: 204 PTDYAPAPTLPAPLPQQCGSQ 224 Y P P LP +CGSQ Sbjct: 227 GHPYTPQPAGSLTLPLECGSQ 247 >A2SDS7.1 A2SDS7_METPP Putative cytochrome c Length = 240 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 118/198 (59%), Positives = 149/198 (75%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 +A+R+ ACT CHGK+G+AT GY+PRIAGKP YL +QL +FRDG+R YP+M+ L+ LS Sbjct: 38 LAQRVLACTTCHGKEGQATNFGYFPRIAGKPAGYLHHQLLAFRDGRRHYPLMSALVETLS 97 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 DDYL+++A +FA PYPPP + +A A +LERGR LV EGD R+LPAC CH ++ G Sbjct: 98 DDYLREMAEYFAALDLPYPPPQTRDAPAALLERGRVLVREGDAARQLPACTQCHGEAMLG 157 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 VQP IPGLLGLPRDY+N+QLG WR+G R A PDCMA +AR L+PE+I A S+WLS+Q V Sbjct: 158 VQPAIPGLLGLPRDYLNSQLGQWRSGQRHALAPDCMADIARQLAPEDIAALSAWLSSQPV 217 Query: 204 PTDYAPAPTLPAPLPQQC 221 P PA LPA LP+ C Sbjct: 218 PAGGKPAAALPAKLPRPC 235 >C9Y8S4.1 C9Y8S4_9BURK Putative uncharacterized protein Length = 231 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 121/209 (57%), Positives = 150/209 (71%), Gaps = 7/209 (3%) Query: 23 GMAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANL 82 GMAER ACTACHG+QG+A DGYYPRIAGKP YL NQLQ+F++G+R+Y M +L+A L Sbjct: 24 GMAERTRACTACHGEQGKAGPDGYYPRIAGKPAGYLYNQLQNFQEGRRQYSPMQHLIAPL 83 Query: 83 SDDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLG 142 SDDYL+ +A +FA H PYP PA+ + VL RG+ LV +GD RRLPAC+ACH +L Sbjct: 84 SDDYLRAMADYFASLHVPYPAPATATVAPDVLARGKALVLQGDESRRLPACIACHGQALT 143 Query: 143 GVQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQA 202 G+QPG+PGLLGLPRDY+NAQLG W+ G R A PDCMA +A+ LS ++NA S WLS+Q Sbjct: 144 GLQPGVPGLLGLPRDYLNAQLGGWQTGQRRAHAPDCMATIAKRLSDADVNAISQWLSSQP 203 Query: 203 VPTDYAPAPTLPA------PLPQQCGSQP 225 VP + PA PLP +CGS P Sbjct: 204 VPANSTAVSVRPARPAQLSPLP-ECGSAP 231 >D4X4L3.1 D4X4L3_9BURK Cytochrome c family protein Length = 252 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 116/203 (57%), Positives = 148/203 (72%) Query: 24 MAERMAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLS 83 MA R+AACTACHG QGRA DGYYPR+AGKP+ YL +QL +FRD +R+Y M++LLA L Sbjct: 49 MAARVAACTACHGAQGRAGTDGYYPRLAGKPQEYLYHQLLNFRDDRRQYRPMSHLLAGLP 108 Query: 84 DDYLQQIARFFADQHPPYPPPASNEASATVLERGRRLVTEGDPQRRLPACVACHAPSLGG 143 DDYL+++AR+F++QH PYPPP + S+ LE GR L +GD R LPAC +CH +LGG Sbjct: 109 DDYLREMARYFSEQHVPYPPPMRADVSSATLEAGRVLALQGDAARGLPACASCHGAALGG 168 Query: 144 VQPGIPGLLGLPRDYINAQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLSAQAV 203 + P IPGLLGLPRDYI +Q+G+W+ G R A PDCMA +A+ L+P +I A ++WLS+Q V Sbjct: 169 LMPAIPGLLGLPRDYIGSQIGSWKTGLRRAAAPDCMADIAQKLTPSDIGALAAWLSSQPV 228 Query: 204 PTDYAPAPTLPAPLPQQCGSQPQ 226 YAP LP QCGSQ Q Sbjct: 229 VEPYAPEAAGSLELPAQCGSQAQ 251