BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0019.p (581 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPL7.1 D8IPL7_HERSS Methyl-accepting chemotaxis protein 1067 0.0 A6T427.1 A6T427_JANMA Methyl-accepting chemotaxis protein 481 e-133 A6T3Y7.1 A6T3Y7_JANMA Methyl-accepting chemotaxis protein 481 e-133 D8IP57.1 D8IP57_HERSS Methyl-accepting chemotaxis protein 459 e-127 A4G9L0.1 A4G9L0_HERAR Methyl-accepting chemotaxis protein 457 e-126 Q1GZB6.1 Q1GZB6_METFK Methyl-accepting chemotaxis sensory transd... 454 e-125 Q8XQC3.1 Q8XQC3_RALSO Probable methyl-accepting chemotaxis trans... 452 e-125 D8IWW7.1 D8IWW7_HERSS Methyl-accepting chemotaxis transducer tra... 449 e-124 C5T9N1.1 C5T9N1_ACIDE Methyl-accepting chemotaxis sensory transd... 446 e-123 A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer tra... 443 e-122 >D8IPL7.1 D8IPL7_HERSS Methyl-accepting chemotaxis protein Length = 583 Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/583 (97%), Positives = 572/583 (98%), Gaps = 2/583 (0%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG Sbjct: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE Sbjct: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 TRKSY+ALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ Sbjct: 121 TRKSYAALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH Sbjct: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE Sbjct: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI Sbjct: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT Sbjct: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA Sbjct: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 Query: 541 PRATKSLPAK--PAAPAVTNAPAAAPALPASKREDKSEEWETF 581 PRATKSLPAK A A AAPALPASKREDKSEEWETF Sbjct: 541 PRATKSLPAKPAAPAVTNAPAAPAAPALPASKREDKSEEWETF 583 >A6T427.1 A6T427_JANMA Methyl-accepting chemotaxis protein Length = 571 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 289/581 (49%), Positives = 384/581 (66%), Gaps = 12/581 (2%) Query: 3 FNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISGKV 62 NL I RL+++F +++++ + L R+ +N A+ V DRY K + N + + Sbjct: 1 MKNLKIGQRLSLSFGSMVILLVVLATLAFTRIGGLNDAISEVDGDRYPKTVLANVMKDDL 60 Query: 63 DDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTETR 122 + +A ++RN LLMT+ A I AE I + EL + V + + + + R Sbjct: 61 NQIARNMRNALLMTEKAAIQAELTQIGKATDSLNNALVELEKTVRSERGRQTIAGLQADR 120 Query: 123 KSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQAE 182 + L+ KL S+G KD A+ L+ +E+ P Q Y + +D+L D Q +LM +S +A Sbjct: 121 SKFLPLKDDFIKLASAGIKDEAVALLFAEVRPAQLSYLASIDKLIDYQNELMKKSGAEAN 180 Query: 183 AAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAHSN 242 A T++++ I ++A AA A +RSITRPLS+AV +A VA GDLT I S Sbjct: 181 AKASQTQLLIGIFSIIAVLIAAVFAVLATRSITRPLSQAVVLARKVADGDLTGSIVVESK 240 Query: 243 DETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEETA 302 DETG+LLQAL MN+ L IV +VR GTD++ +AS QIATGNLDLSSRTE+QAS+LEETA Sbjct: 241 DETGQLLQALKDMNEGLLKIVTQVRLGTDTIASASHQIATGNLDLSSRTEQQASSLEETA 300 Query: 303 SSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDIIS 362 SS+EELTS+VKQNA++ R+S++LA +AS+VA +GG V +VV TMG INDS+ KIVDII Sbjct: 301 SSMEELTSTVKQNAENARQSNQLALSASEVAVRGGAVVSKVVDTMGEINDSAKKIVDIIG 360 Query: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDSVN 422 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAKEIKELI DSV+ Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIGDSVD 420 Query: 423 QVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTTQQ 482 +V+ G+ LV AG+TM VV S+++V+ I+ EI+AA++EQ+DGIEQ+NQA+MQMD TQQ Sbjct: 421 KVSIGSRLVDDAGATMREVVESVKRVTDIMSEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 483 NAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGS--GPAPSAVAPVAPVLRKVSAAA 540 NAALVEEAAAAA++LQ QA L +VGVF+LD G + P+ AP P + AA Sbjct: 481 NAALVEEAAAAAESLQGQASHLSQVVGVFKLDGHGTTVVNAVPTYTAPEQP--KVAGKAA 538 Query: 541 PRATKSLPAKPAAPAVTNAPAAAPALPASKREDKSEEWETF 581 K+ K P +PA +EWE F Sbjct: 539 LHKVKTTQQKIEDKEFARVP--RNVVPA------GDEWEQF 571 >A6T3Y7.1 A6T3Y7_JANMA Methyl-accepting chemotaxis protein Length = 566 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 295/579 (50%), Positives = 386/579 (66%), Gaps = 13/579 (2%) Query: 3 FNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISGKV 62 NL I RLA++F ++ V+ + + RL ++ A+ +V NDRY K + I + Sbjct: 1 MKNLKIGQRLALSFGSVVAVLIVLAVIAFTRLDKLDAAIGMVSNDRYPKTVNAHIIKDTL 60 Query: 63 DDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTETR 122 ++ A ++RN LLMTD AQI E TIE S + D+L R + + + + + +T+ R Sbjct: 61 NETARNMRNALLMTDAAQIKGELDTIEKGSVTIAEALDKLDRTIKSEKGRTYIKALTDAR 120 Query: 123 KSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQAE 182 ++ ++ + L + G + A L+ +E+ P Q Y LD L + Q LM ++ + A Sbjct: 121 GRFTPVKDKFVALVAQGMRAEAQILLFAEVRPAQLEYMLGLDRLVEFQSNLMHKAGEDAH 180 Query: 183 AAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAHSN 242 + ++ I V+A +AF+ + +RSITRPLS+AV +A VA GDLT I S Sbjct: 181 EVSANAQQLVGILSVIAVIISAFLGFLATRSITRPLSQAVGLARKVADGDLTGTIVVTSK 240 Query: 243 DETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEETA 302 DETG+LLQAL MN L IV +VR GTD++ TAS+QIATGNLDLSSRTEEQAS+LEETA Sbjct: 241 DETGQLLQALQDMNNGLVRIVTQVRMGTDTIATASSQIATGNLDLSSRTEEQASSLEETA 300 Query: 303 SSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDIIS 362 SS+EELTS+VKQNAD+ R+S++LA AS+VA +GG V QVV+TMG+INDS++KIVDII Sbjct: 301 SSMEELTSTVKQNADNARQSNQLALTASEVAVRGGAVVSQVVETMGSINDSANKIVDIIG 360 Query: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDSVN 422 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAKEIK LI+DSV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKTLIDDSVE 420 Query: 423 QVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTTQQ 482 +V +G+ LV AG+TM VV S+ +V+ I+GEI+AA++EQ+DGIEQ+NQA+MQMD TQQ Sbjct: 421 KVNNGSRLVHDAGTTMAEVVESVRRVTDIMGEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 483 NAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAAPR 542 NAALVEEAAAAA++LQDQA L +V VF+LD + A S VA AP R VS Sbjct: 481 NAALVEEAAAAAESLQDQANNLSQVVSVFKLDANAVALQATSRVA--APASRPVSK---- 534 Query: 543 ATKSLPAKPAAPAVTNAPAAAPALPASKREDKSEEWETF 581 PA+ A N AS +EWE F Sbjct: 535 -----PAQQIRSA--NVDKQIVRQRASATAGDGDEWEQF 566 >D8IP57.1 D8IP57_HERSS Methyl-accepting chemotaxis protein Length = 576 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 290/568 (51%), Positives = 382/568 (67%), Gaps = 15/568 (2%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+ +++ I+ RL F+ LI+V+ I +G+ L ++ A D +VNDRY K+A+ I+ Sbjct: 2 MKISDMKISVRLGACFAALIVVMCVIAGVGVKNLLMVSDATDEIVNDRYVKVALGTQITD 61 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 KV+ A SLRN ++ +P + +++ +++ ++ E+ + P L + + Sbjct: 62 KVNTGARSLRNAIMARNPEEQKKYLDRMDTYTSQVSEHLAEMEKRTNTPRGSELLAALKQ 121 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R YS R ++ L +D A + + +P+Q YF+ + E+ Q LMD+S ++ Sbjct: 122 ARADYSKERIKVVDLIHQQKRDEATAHLFDKTIPVQDKYFAAVKEMVSFQSSLMDKSAER 181 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 A AA + IM++ +A +A A I+RSITRPL+ AV+VA VAAGDLT I A Sbjct: 182 ASAASSSAINIMLVLSGVAVLLSALCAMLITRSITRPLNEAVQVATAVAAGDLTVQIEAT 241 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 S DETG LL AL +MN L IV EVR GTD++ TAS +IATGNLDLSSRTE+QA ALEE Sbjct: 242 SKDETGALLGALKSMNDNLHRIVAEVRAGTDTINTASREIATGNLDLSSRTEQQAGALEE 301 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TAS++EELTS+V+QNAD+ R+++ LA ASQVA QGG V +VVQTMG IND+S KIVDI Sbjct: 302 TASAMEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDI 361 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI+ S Sbjct: 362 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDAS 421 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V +V SG+ LV QAG+TM+ VV S+++V+ +V EI+AA+ EQSDGIEQ+NQAI+QMD T Sbjct: 422 VERVESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVT 481 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 QQNAALVE+AAAAAQ+LQ+Q+ RL D VG+FRL P+P + APV R V A Sbjct: 482 QQNAALVEQAAAAAQSLQEQSGRLSDTVGIFRLGNDHAHQPSPLS----APVQRSVQVA- 536 Query: 541 PRATKSLPAKPAAPAVTNAPAAAPALPA 568 PA P + P + PA Sbjct: 537 ----------PARPVLARKPVTRTSAPA 554 >A4G9L0.1 A4G9L0_HERAR Methyl-accepting chemotaxis protein Length = 561 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 282/582 (48%), Positives = 384/582 (65%), Gaps = 22/582 (3%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+F NL I RL +AF +L++++A + +G+ RL D+ KA L+ K+ I G Sbjct: 1 MQFKNLKIGVRLGMAFGLLLVLMAFMTVMGVLRLQDVAKATVLMEEATIKERLAQQWIKG 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 ++ + ++ +DP Q Q+ + ++SA +K DEL LV + E K L V E Sbjct: 61 -IETNTVRTFARVRTSDPEQDKILQQEMSAISAAVSKQQDELETLVVSAEGKKLLATVAE 119 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIK-LMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVD 179 R +Y+A+R + L+ + + A ++ + ++M P Y ++ + + Q + + Sbjct: 120 KRATYTAIRDDVMNLREA--RGAELQNAIANKMKPAADAYIQSVEAVVNAQINNFEDAKG 177 Query: 180 QAEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAA 239 + + Y++ RM++++ G++A T +AW ++RSIT+PL AV VA VA+GDLT I Sbjct: 178 RVDTIYQSARMLLIVLGLVALTLGIVLAWMLTRSITKPLDYAVSVARLVASGDLTGRITV 237 Query: 240 HSNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALE 299 S DETG+LLQAL MN L A + +VR G D++ TAS QIA+GNLDLSSRTEEQAS+LE Sbjct: 238 DSKDETGQLLQALKDMNDSLTASITQVRSGVDTIATASNQIASGNLDLSSRTEEQASSLE 297 Query: 300 ETASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVD 359 ETASS+EELTS+VKQNAD+ R++++LA AS VA +GG V +VV TM IN S+ KIVD Sbjct: 298 ETASSMEELTSTVKQNADNARQANQLAVTASGVAEKGGTVVSKVVDTMDGINTSARKIVD 357 Query: 360 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELIND 419 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI+D Sbjct: 358 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIDD 417 Query: 420 SVNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNT 479 SV++V +G++LVA+AG+TM VV+S+++V+ I+ EI AA++EQS GIEQVNQAI QMD Sbjct: 418 SVDKVDTGSKLVAEAGTTMVEVVDSVKRVTDIMAEIMAASQEQSAGIEQVNQAIGQMDQV 477 Query: 480 TQQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAA 539 TQQNAALVEEAAAAA++L +QA L V +F+LD V S S VA PV ++ Sbjct: 478 TQQNAALVEEAAAAAESLNEQAANLAQAVSIFKLDGVANS----SRVATRLPV---AASN 530 Query: 540 APRATKSLPAKPAAPAVTNAPAAAPALPASKREDKSEEWETF 581 AP AT+ A PA + N R ++WE F Sbjct: 531 AP-ATRQFAASPAPKKIAN----------ETRPVSGDDWEEF 561 >Q1GZB6.1 Q1GZB6_METFK Methyl-accepting chemotaxis sensory transducer Length = 569 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 278/585 (47%), Positives = 376/585 (64%), Gaps = 20/585 (3%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+F++L I RL F++++L++ +VA GLA+LA++ VV KK I Sbjct: 1 MKFSDLRIGVRLGAGFAVILLLMMIMVAFGLAQLANVGSTAKQVVETELKKERITTEWVS 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 + + +D A + I + N L +L L+ PE KAK E Sbjct: 61 NATQNGLRTLAAIKSSDAAMYDMYIQQIAETARANDSLKQQLETLLVKPEGKAKFADAKE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSE-MVPLQKIYFSQLDELSDTQQKLMDQSVD 179 ++S +R ++ +L+ G + + I+ + E +P +K YF ++EL + ++ L+D++ Sbjct: 121 KADAFSKVRSELLQLRKDGAEASLIEKNVQEVFLPARKAYFDSMNELLEFERHLIDEAGA 180 Query: 180 QAEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAA 239 + + M++ G++A A AW +S ITRPL+ AV++AETVAAGDLT+ +A Sbjct: 181 DIQRVKNAASLWMLVIGLVAVVLGAIFAWRLSLGITRPLANAVKLAETVAAGDLTSTLAI 240 Query: 240 HSNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALE 299 S DE G+LL AL +MN L IV EVR GT+++ TAS+QIA+GNLDLSSRTEEQAS+LE Sbjct: 241 DSKDEIGQLLNALKSMNDNLARIVSEVRSGTETIATASSQIASGNLDLSSRTEEQASSLE 300 Query: 300 ETASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVD 359 ETAS++EELTS+VKQNAD+ +++++LA +AS +A QGG V QV+ TM +I++SS +I D Sbjct: 301 ETASAMEELTSTVKQNADNAQQANQLAVSASGIATQGGEVVDQVIATMQSISESSKRIAD 360 Query: 360 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELIND 419 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI D Sbjct: 361 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSANAAKEIKGLITD 420 Query: 420 SVNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNT 479 SV V +G+ LV QAG+TM VV+S+++V+ IV EISAA+ EQS GIEQVNQAI+QMD Sbjct: 421 SVESVDAGSRLVEQAGTTMKHVVDSVQRVTDIVSEISAASHEQSTGIEQVNQAIVQMDEV 480 Query: 480 TQQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAA 539 TQQNAALVEEAAAA+Q+LQDQA L V VF+++ + V + KVS Sbjct: 481 TQQNAALVEEAAAASQSLQDQAASLAQAVSVFKVNGM-----------QVQAAVHKVSKP 529 Query: 540 APRATKSLPAKPAAPAVTNA---PAAAPALPASKREDKSEEWETF 581 P A A+ VT A PA+ S ++EWE F Sbjct: 530 KPVAVSKPKVVVASKPVTTTRTRTAMVPAVAGS-----ADEWEEF 569 >Q8XQC3.1 Q8XQC3_RALSO Probable methyl-accepting chemotaxis transducer transmembrane protein Length = 543 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 258/535 (48%), Positives = 353/535 (65%), Gaps = 5/535 (0%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 MR +++ I RL AF++++ ++ GI A+G+ RL D N + +V++RY IA+ N I Sbjct: 1 MRISDMRIGVRLGAAFALVVALLIGIAAVGIQRLDDNNTKMGQIVSERYSLIALSNQIKN 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 L N LL+T P Q ++ N + Y L +L+ + KA + + Sbjct: 61 NGYKANGILSNLLLVTTPEQKTKYMSDYAAIRQANAQAYGRLEKLLTTDQGKALFKEQFD 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R +Y A ++ L + + A L +M LQ Y+ +D++ D Q M+ V + Sbjct: 121 ARSAYGASVRKFFALVDADNVQEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEHDVSE 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 A A ++ M++ VLA A I+R+ITRP++ A+ +AE VA G+LT ++ Sbjct: 181 AAAQGANAKIQMIVLAVLATLLAIATGAFITRTITRPINHAMHLAEAVAQGNLTHLLEVD 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 + DE GRLL AL M + L IV +VR GTD++ AS+++A+GN+DLSSRTE+QAS+LEE Sbjct: 241 TQDEIGRLLAALKHMIENLHGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TA+++E+LTS+VKQNAD+ +++S LA+NAS VA +GG AV + +QTM IN SS KIVDI Sbjct: 301 TAAAMEQLTSTVKQNADNAQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 I VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR LAQRSA AAKEIK LI DS Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V V++GT V +AG + VV I+ V++IV EISA++REQSDGIEQ+N+AI QMD T Sbjct: 421 VGHVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKAT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLD-EVGGSGPA----PSAVAPVA 530 Q+NA+LVEE+A AAQALQDQA +L D+V F+L ++ G G A +VA VA Sbjct: 481 QENASLVEESATAAQALQDQANQLADMVSTFKLHADLSGRGRAAQGEAGSVAHVA 535 >D8IWW7.1 D8IWW7_HERSS Methyl-accepting chemotaxis transducer transmembrane protein Length = 597 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 276/513 (53%), Positives = 364/513 (70%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+ ++ I+ RLA+ F++LI V+ I +G+ L+ I+K+ L+V DRY+KIA+ I Sbjct: 1 MKLKDIKISVRLAVCFAVLIGVMCLITGVGMKSLSSISKSSALIVEDRYEKIALAVEIRD 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 V+ A +LRN LL + + + SA+ T+ ++ ++++ + + E Sbjct: 61 NVNGAARNLRNALLGRNLEEATRYLDRSAANSAKTTEALGKMEKILSTARGRELFQSIQE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R +Y+ R ++ +L K+ A++L+ ++++P Q YF LD+ Q+ LM+QSV + Sbjct: 121 ARSAYNTPRDKLRELIKQQKKEEAVELLFTQVIPAQDKYFQVLDQFVAFQKSLMEQSVTE 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 ++ +M+ +A AW ++RSITRPL+ AV VA VAAGDLT I A Sbjct: 181 GRDTTQSAIAMMLGLSAVAIALCVIAAWLVTRSITRPLNEAVSVASAVAAGDLTVQIGAT 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 S DETG LL AL +MN L IV EVR+G+D++ TAS +IATGNLDLSSRTEEQA ALEE Sbjct: 241 SKDETGALLAALKSMNDSLHRIVSEVRQGSDTINTASAEIATGNLDLSSRTEEQAGALEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TAS++EELTS+VKQNAD+ R+++ LAA AS+VA QGG V QVVQTMG IND+S KIVDI Sbjct: 301 TASAMEELTSTVKQNADNARQANSLAATASEVAVQGGSVVGQVVQTMGEINDASRKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAKEIK LI+DS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKALIDDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V++V +G+ LV QAG+TM VV S+ +V+ +V EISAA+ EQSDGIEQ+N AI QMD T Sbjct: 421 VSRVDNGSRLVEQAGTTMTEVVASVRRVTDVVAEISAASNEQSDGIEQINHAITQMDQVT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRL 513 QQNAALVEEAAAAAQ+LQ+Q+ RL V VF+L Sbjct: 481 QQNAALVEEAAAAAQSLQEQSTRLSATVSVFKL 513 >C5T9N1.1 C5T9N1_ACIDE Methyl-accepting chemotaxis sensory transducer (Fragment) Length = 518 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 274/520 (52%), Positives = 357/520 (68%), Gaps = 2/520 (0%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M F NL I TRLA+ FS+++L +A I+ +G+ L + ++ +VN K+A NT+ Sbjct: 1 MSFLNLKIGTRLALGFSVVLLFLAAILGMGVYSLGHLQSRMEEMVNSNNVKLAAANTMLD 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 ++ D+ +L+ D A A+ K + A+ L +LVA+ + KA L KV Sbjct: 61 QIRDIYAIGAMVVLVPDEAGKQAQLKQVADARAKYGAAKATLEKLVASEQGKAALAKVDA 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 + L Q+ L A + ++++ P + QL+ L+D Q +L Q+ Sbjct: 121 ALAAAVPLSNQLFDLAVKNMTAEATEHLMTKAGPAMRAALDQLNNLADLQTRLSSQANAD 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 AEA Y + R M+ G+LA IAW I+RSITRP++ AVEVA TVA GDL++ I Sbjct: 181 AEAEYRSARNWMIGLGLLAILAGVAIAWHITRSITRPITHAVEVARTVADGDLSSRIDVV 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 S DETG+L++AL MN L +V EVR G DSM TA++QIA GN DLSSRTEEQAS+LEE Sbjct: 241 STDETGQLMRALQHMNDSLAKVVGEVRSGADSMATATSQIAAGNQDLSSRTEEQASSLEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TA+S+EELTS+V+QNAD+ R++++LA AS VA +GG V QVVQTM AIN SSHKIVDI Sbjct: 301 TAASMEELTSTVRQNADNARQANQLALTASSVAVKGGDVVSQVVQTMDAINSSSHKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 I VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI+DS Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAEAAKEIKVLIDDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V++V G++ V +AG TM+ +V+S+ +V+ I+GEI+AA++EQ+ GIEQVNQAI QMD T Sbjct: 421 VSKVEQGSQQVGEAGKTMEEIVSSVRRVTDIMGEITAASQEQTSGIEQVNQAIAQMDQVT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSG 520 QQNAALVEEAAAAA +LQ QA L +V VF+L GG+G Sbjct: 481 QQNAALVEEAAAAADSLQGQAGHLSQVVSVFKL--AGGAG 518 >A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer transmembrane protein Length = 568 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 276/586 (47%), Positives = 385/586 (65%), Gaps = 23/586 (3%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+ NL I+TRL+ F++L+ ++ + +G+ RL ++ + D++ K + Sbjct: 1 MKITNLKISTRLSFGFALLLTLMVMMTVVGILRLQEVGTSADVMTQTMLPKERLAQEWLS 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 VD T A QK ++ S +L E+ ++ PE K +++ Sbjct: 61 AVDVNGARTLASAKTTSAEDQAFFQKQMDKTSVRANELQKEIESMIKTPEDKRLFEELVV 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R +Y +R+ + KL++ G A L+ +M+P Y + +D + ++KL+D++ Sbjct: 121 ARNAYRDIRQTVFKLKAEGKLPEAQLLINEKMLPAMNAYSNSIDAVLQNEKKLIDEAGTS 180 Query: 181 AEAAYETTRMIMVIAGVLAATFA--AFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIA 238 ++A+ + R +++ G+LAA A F AW ++ SITRPL+RAV VA TVA+GDL+A I Sbjct: 181 IQSAFLSGRSLLI--GLLAAAVALGVFFAWRLAISITRPLNRAVTVARTVASGDLSAKIE 238 Query: 239 AHSNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASAL 298 SNDETG+L+QAL M Q L V EVR GT+++ TAS QIA+GNLDLSSRTEEQAS+L Sbjct: 239 VSSNDETGQLMQALKDMTQSLNKTVSEVRSGTETIATASRQIASGNLDLSSRTEEQASSL 298 Query: 299 EETASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIV 358 ETA+S+ +LTS+V+QNAD+ R+++ LA +AS VA +GG V +VV TM +IN+S+ KIV Sbjct: 299 GETAASMGQLTSTVRQNADNARQANSLAMSASDVAVKGGSVVSEVVDTMASINESARKIV 358 Query: 359 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELIN 418 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI Sbjct: 359 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKILIG 418 Query: 419 DSVNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDN 478 DSV +V +G++LV +AGSTM+ +V+S+++V+ I+ EI AA++EQS GI+QVNQAI QMD Sbjct: 419 DSVGKVEAGSKLVNEAGSTMNEIVDSVKRVTDIMAEIMAASQEQSSGIDQVNQAIGQMDQ 478 Query: 479 TTQQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSA 538 TQQNAALVEEAAAAA++LQDQA L +V F+LD G+ PA + PV+R Sbjct: 479 VTQQNAALVEEAAAAAESLQDQAGNLARVVSQFKLD---GNQPAFVSSLDDIPVVRNT-- 533 Query: 539 AAPRATKSLPAKPAAPAVTNAPAAAPALPASKREDKS---EEWETF 581 T ++ + A P ++N P AP KRE + ++WE F Sbjct: 534 -----TPAIRTQAAKPLLSN-PVHAP-----KREKATAGADDWEEF 568