BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0011.p (497 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPK8.1 D8IPK8_HERSS ATP-dependent RNA helicase protein 908 0.0 F1VTY5.1 F1VTY5_9BURK ATP-dependent RNA helicase 736 0.0 A6SX95.1 A6SX95_JANMA ATP-dependent RNA helicase 726 0.0 A4G7H2.1 A4G7H2_HERAR Putative ATP-dependent RNA helicase 720 0.0 C3XAK3.1 C3XAK3_OXAFO ATP-dependent RNA helicase 652 0.0 C7RK54.1 C7RK54_ACCPU DEAD/DEAH box helicase domain protein 630 e-178 C3X4E6.1 C3X4E6_OXAFO ATP-dependent RNA helicase 628 e-178 B5S6N0.1 B5S6N0_RALSO Atp-dependent rna helicase protein EC=3.-.-.- 552 e-155 B5SF00.1 B5SF00_RALSO Atp-dependent rna helicase protein EC=3.-.-.- 551 e-155 A3RP86.1 A3RP86_RALSO ATP-dependent RNA helicase 551 e-155 >D8IPK8.1 D8IPK8_HERSS ATP-dependent RNA helicase protein Length = 510 Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/510 (96%), Positives = 494/510 (96%), Gaps = 13/510 (2%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL Sbjct: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 Query: 61 HQLADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYG 120 HQLADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYG Sbjct: 61 HQLADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYG 120 Query: 121 AYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA 180 AYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA Sbjct: 121 AYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA 180 Query: 181 DRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHE 240 DRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHE Sbjct: 181 DRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHE 240 Query: 241 NIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHG 300 NIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHG Sbjct: 241 NIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHG 300 Query: 301 DMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTG 360 DMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTG Sbjct: 301 DMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTG 360 Query: 361 RAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPRSPRKPGGWRPGD 420 RAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPRSPRKPGGWRPGD Sbjct: 361 RAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPRSPRKPGGWRPGD 420 Query: 421 GRSNNGPRYGAGN-------------REGGGHREGGFGGNREGGYNREGRSFGGAKPGNG 467 GRSNNGPRYGAGN GGHREGGFGGNREGGYNREGRSFGGAKPGNG Sbjct: 421 GRSNNGPRYGAGNREGGGHREGGFGGNREGGHREGGFGGNREGGYNREGRSFGGAKPGNG 480 Query: 468 PRREGGGGGGYKGNGGGFRADGPRRSYGDR 497 PRREGGGGGGYKGNGGGFRADGPRRSYGDR Sbjct: 481 PRREGGGGGGYKGNGGGFRADGPRRSYGDR 510 >F1VTY5.1 F1VTY5_9BURK ATP-dependent RNA helicase Length = 468 Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/500 (74%), Positives = 414/500 (82%), Gaps = 35/500 (7%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 MTFEALGL+ S+IKALTE+GY PT VQE+AIPAAI G+DLLVSSQTGSGKTAAFMLP+L Sbjct: 1 MTFEALGLHTSVIKALTESGYIKPTSVQEQAIPAAIEGRDLLVSSQTGSGKTAAFMLPAL 60 Query: 61 HQLADLPPAPQA--ARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDK 118 H+ A A ++TPNQE+Q++ ARGERPR++ AQPKMLVLTPTRELALQVTTATDK Sbjct: 61 HKFATAAELQLADSSKTPNQEKQSALARGERPRFKAAQPKMLVLTPTRELALQVTTATDK 120 Query: 119 YGAYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLD 178 YG+ MRR++ VSILGGMPYPKQMQLL++NPEILVATPGRLIDHMESGKIDFSQL+ILVLD Sbjct: 121 YGSQMRRIKAVSILGGMPYPKQMQLLAKNPEILVATPGRLIDHMESGKIDFSQLEILVLD 180 Query: 179 EADRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTR 238 EADRMLDMGFIDDIEKIVAATP +RQTMLFSATLDGVVGNMAKRIT NP+ IQIA S+T+ Sbjct: 181 EADRMLDMGFIDDIEKIVAATPESRQTMLFSATLDGVVGNMAKRITKNPMIIQIAGSATK 240 Query: 239 HENIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAAL 298 HENI QRVHFVDDLSHKNRLLDHLLRD ++DQAV+FTATKRDADTIADRLNIAGFAAAAL Sbjct: 241 HENISQRVHFVDDLSHKNRLLDHLLRDETMDQAVVFTATKRDADTIADRLNIAGFAAAAL 300 Query: 299 HGDMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGR 358 HGDMHQGARNRTL+ +RRGQVR+LVATDVAARGIDVP ITHVFNYDLPKF EDYVHRIGR Sbjct: 301 HGDMHQGARNRTLDGMRRGQVRVLVATDVAARGIDVPAITHVFNYDLPKFPEDYVHRIGR 360 Query: 359 TGRAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSA-APRSPRKPGGWR 417 TGRAGRNG+A+SLVNHAEG+ VKRIERFTKQ IPV+V+EGFEPKK+A APRS +KPGGW+ Sbjct: 361 TGRAGRNGIAVSLVNHAEGINVKRIERFTKQLIPVEVIEGFEPKKTASAPRSGQKPGGWK 420 Query: 418 PGDGRSNNGPRYGAGNREGGGHREGGFGGNREGGYNREGRSFGGAKPGNGPRREGGGGGG 477 PGD RS P G R ++ ++G SF GPR GG Sbjct: 421 PGDNRSAAKP----------GQRT----FSKPSAPRKDGSSF-----SKGPRTGDAGGAA 461 Query: 478 YKGNGGGFRADGPRRSYGDR 497 RR YGDR Sbjct: 462 -------------RRPYGDR 468 >A6SX95.1 A6SX95_JANMA ATP-dependent RNA helicase Length = 466 Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/427 (81%), Positives = 390/427 (91%), Gaps = 1/427 (0%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 MTFE+LGL+ SIIKALTE+GYT+PT VQ +AIPAAI G+D++VSSQTGSGKTAAFMLP+L Sbjct: 1 MTFESLGLHASIIKALTESGYTAPTGVQAQAIPAAIEGRDMMVSSQTGSGKTAAFMLPAL 60 Query: 61 HQLADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYG 120 H+ A PQ +TPNQE Q++R+RG+RPR++PAQPKMLVLTPTRELALQVTT+TDKYG Sbjct: 61 HKFASEGDQPQTGKTPNQEAQSARSRGDRPRFKPAQPKMLVLTPTRELALQVTTSTDKYG 120 Query: 121 AYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA 180 A+M+RV+ VSILGGMPYPKQMQLL++NPEILVATPGRLIDHMESGKIDFSQLQILVLDEA Sbjct: 121 AFMKRVKAVSILGGMPYPKQMQLLAKNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA 180 Query: 181 DRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHE 240 DRMLDMGFIDDIEKIVAATP RQTMLFSATLDG+VGNMAKRIT + L IQIA S+T+HE Sbjct: 181 DRMLDMGFIDDIEKIVAATPEGRQTMLFSATLDGMVGNMAKRITKDALIIQIAGSATKHE 240 Query: 241 NIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHG 300 NI Q VHFVDDLSHKNR+LDHLLRD ++DQAV+FTATKRDADTIADRLNIAGFAAAALHG Sbjct: 241 NIKQCVHFVDDLSHKNRMLDHLLRDETMDQAVVFTATKRDADTIADRLNIAGFAAAALHG 300 Query: 301 DMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTG 360 DMHQGARNRTL+ LRRGQ+R+LVATDVAARGIDVPGITHV NYDLPKF EDYVHRIGRTG Sbjct: 301 DMHQGARNRTLDGLRRGQIRVLVATDVAARGIDVPGITHVVNYDLPKFPEDYVHRIGRTG 360 Query: 361 RAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSA-APRSPRKPGGWRPG 419 RAGRNG+A+SLVNHAE M VKRIERF KQ IPV+V+EGFEPK+SA APRS KPGGW+PG Sbjct: 361 RAGRNGIAVSLVNHAESMNVKRIERFIKQLIPVEVIEGFEPKRSASAPRSNHKPGGWKPG 420 Query: 420 DGRSNNG 426 D R N Sbjct: 421 DNRGNTA 427 >A4G7H2.1 A4G7H2_HERAR Putative ATP-dependent RNA helicase Length = 468 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/481 (75%), Positives = 402/481 (83%), Gaps = 26/481 (5%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 MTFE+LGL+ SIIKALTE+GYT+PT VQ +AIPAAI G+D++VSSQTGSGKTAAFMLP+L Sbjct: 1 MTFESLGLHASIIKALTESGYTAPTGVQAQAIPAAIEGRDMMVSSQTGSGKTAAFMLPAL 60 Query: 61 HQLA--DLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDK 118 H+ A P+ RTPNQE Q++R+RG+RPR++ AQPKMLVLTPTRELALQVTT+TDK Sbjct: 61 HKFAVQSEQQQPEGGRTPNQEAQSARSRGDRPRFKAAQPKMLVLTPTRELALQVTTSTDK 120 Query: 119 YGAYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLD 178 YGA+M+RV+ VSILGGMPYPKQMQLL++NPEILVATPGRLIDHMESGKIDFS+LQILVLD Sbjct: 121 YGAFMKRVKAVSILGGMPYPKQMQLLAKNPEILVATPGRLIDHMESGKIDFSELQILVLD 180 Query: 179 EADRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTR 238 EADRMLDMGFIDDIEKIVAATP RQTMLFSATLDG VG MAKRIT +PL IQIA S+T+ Sbjct: 181 EADRMLDMGFIDDIEKIVAATPEGRQTMLFSATLDGTVGTMAKRITKDPLVIQIAGSATK 240 Query: 239 HENIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAAL 298 HENI Q VHFVDDLSHKNRLLDHLLRD ++DQAV+FTATKRDADTIADRLNIAGFAAAAL Sbjct: 241 HENIKQGVHFVDDLSHKNRLLDHLLRDETMDQAVVFTATKRDADTIADRLNIAGFAAAAL 300 Query: 299 HGDMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGR 358 HGDMHQGARNRTL+ LRRGQ+R+LVATDVAARGIDVP ITHVFNYDLPKF EDYVHRIGR Sbjct: 301 HGDMHQGARNRTLDGLRRGQIRVLVATDVAARGIDVPAITHVFNYDLPKFPEDYVHRIGR 360 Query: 359 TGRAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSA-APRSPRKPGGWR 417 TGRAGRNG+A+SLVNHAEGM VKRIERF KQ IPV V+EGFEPK++A APRS KPGGW+ Sbjct: 361 TGRAGRNGIAVSLVNHAEGMNVKRIERFIKQLIPVSVIEGFEPKRTASAPRSNHKPGGWK 420 Query: 418 PGDGRSNNGPRYGAGNREGGGHREGGF--GGNREGGYNREGRSFGGAKPGNGPRREGGGG 475 PGD R GN G R EGGYN+ GPR GG Sbjct: 421 PGDNR---------GNAAKPGQRTFSKPNATRNEGGYNK------------GPRTSDAGG 459 Query: 476 G 476 Sbjct: 460 A 460 >C3XAK3.1 C3XAK3_OXAFO ATP-dependent RNA helicase Length = 465 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/460 (70%), Positives = 378/460 (82%), Gaps = 5/460 (1%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 MTFEALGL+P I KAL + Y PTPVQEKAIPA I G+DLLVSSQTGSGKTAAFMLP+L Sbjct: 1 MTFEALGLHPLIQKALADIHYDKPTPVQEKAIPAGIEGKDLLVSSQTGSGKTAAFMLPAL 60 Query: 61 HQLADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYG 120 H+ A +P +T NQ+RQA+RA+GE+ RY+PA PKMLVLTPTRELA+Q+ +++ Y Sbjct: 61 HRFASVPFEKSDKKTFNQKRQAARAKGEKVRYEPAHPKMLVLTPTRELAMQIVQSSEDYS 120 Query: 121 AYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA 180 AY++ R V+ILGGMPYPKQMQLL++NPEILVATPGRLIDHM SGKI F QL+ILVLDEA Sbjct: 121 AYLKHFRTVAILGGMPYPKQMQLLAKNPEILVATPGRLIDHMHSGKIRFDQLEILVLDEA 180 Query: 181 DRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHE 240 DRMLDMGFIDDIE I+AATP TRQTMLFSATLDG+VGNMA++IT +P I I S ++RHE Sbjct: 181 DRMLDMGFIDDIETIIAATPETRQTMLFSATLDGIVGNMARKITRDPELIHIHSVASRHE 240 Query: 241 NIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHG 300 NI Q +HFVDDL HKNRLLDHLL D S+DQA++FTATKRDAD +ADRL IAGF+AAALHG Sbjct: 241 NIDQMIHFVDDLPHKNRLLDHLLHDRSLDQALVFTATKRDADIVADRLAIAGFSAAALHG 300 Query: 301 DMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTG 360 DM QGARNRTL LRRGQV++LVATDVAARGID+P ITHV NYDLPKF EDYVHRIGRTG Sbjct: 301 DMPQGARNRTLTKLRRGQVKILVATDVAARGIDIPNITHVVNYDLPKFPEDYVHRIGRTG 360 Query: 361 RAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKS--AAPRSPRKPGGWRP 418 RAGR+G+AISLVNH + V++IERFTKQ+IPV+V+EGFEPK S AAP S RKP GW+P Sbjct: 361 RAGRHGLAISLVNHNDNNNVRKIERFTKQSIPVNVIEGFEPKLSFKAAP-SKRKPSGWKP 419 Query: 419 GDGRSNNGPRYGA-GNREGGGHREGGFGGNREGGYNREGR 457 G R N P++ G + R+ G G +R G + EGR Sbjct: 420 GSKR-NASPKFSQRGFGKPAAARKDGAGRSRGQGRSGEGR 458 >C7RK54.1 C7RK54_ACCPU DEAD/DEAH box helicase domain protein Length = 474 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 330/504 (65%), Positives = 388/504 (76%), Gaps = 37/504 (7%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 M F +GL+P+I+KALT++GY+ PTPVQ++AIP AI G+DL+VSSQTGSGKTAAFMLP+L Sbjct: 1 MNFAEIGLHPAILKALTDSGYSEPTPVQQQAIPPAIEGRDLMVSSQTGSGKTAAFMLPAL 60 Query: 61 HQLADLPPAPQAARTPNQERQASRARG-ERPRYQPAQPKMLVLTPTRELALQVTTATDKY 119 H+ A L P A P+ ER A+R RG +R R+Q AQP+MLVLTPTRELALQVT AT+KY Sbjct: 61 HRFA-LQERPAAVPRPS-ERGAARPRGHDRQRFQAAQPRMLVLTPTRELALQVTAATEKY 118 Query: 120 GAYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDE 179 G + VR V+ILGGMPYPKQM+LL RNPEILVATPGRLIDHM SGKIDFSQLQILVLDE Sbjct: 119 GRQLHHVRAVAILGGMPYPKQMELLGRNPEILVATPGRLIDHMSSGKIDFSQLQILVLDE 178 Query: 180 ADRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRH 239 ADRMLDMGFI+DIE+IVAATP +RQT+LFSATLDG VG +A+R+T L IQ+ ++S RH Sbjct: 179 ADRMLDMGFIEDIERIVAATPGSRQTLLFSATLDGTVGELAQRMTRAALRIQVDATSARH 238 Query: 240 ENIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALH 299 +NI QR+HFVDDL+HKNRLLDHLLRD +IDQA++FTATKRDADT++DRLN+AG AAALH Sbjct: 239 DNIEQRMHFVDDLAHKNRLLDHLLRDATIDQALVFTATKRDADTVSDRLNVAGLNAAALH 298 Query: 300 GDMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRT 359 GDMHQGARNRTL ++RRGQVR+LVATDVAARGIDVP ITHVFNYDLPKFAEDYVHRIGRT Sbjct: 299 GDMHQGARNRTLAAMRRGQVRILVATDVAARGIDVPTITHVFNYDLPKFAEDYVHRIGRT 358 Query: 360 GRAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPRSPRKPG--GWR 417 GRAGRNG+AISLV+HAE V++IERFTKQ IPV++V G EP + PR G W+ Sbjct: 359 GRAGRNGLAISLVHHAEHFNVRKIERFTKQPIPVEIVIGHEPTRRPIAVKPRPAGKPAWK 418 Query: 418 PGDGRSNNGPRYGAGNREGGGHREGGFGGNREGGYNREGRSFGGAKPGNGPRREGGGGGG 477 D R P NR +KP + P+R+G G Sbjct: 419 GSDNRGLGQPAGRTDNR--------------------------FSKP-SAPKRDGAGRAP 451 Query: 478 Y----KGNGGGFRADGPRRSYGDR 497 Y KG+ GG A G RR+YGDR Sbjct: 452 YHEAAKGSHGGV-ASGSRRTYGDR 474 >C3X4E6.1 C3X4E6_OXAFO ATP-dependent RNA helicase Length = 461 Score = 628 bits (1619), Expect = e-178, Method: Compositional matrix adjust. Identities = 302/434 (69%), Positives = 363/434 (83%), Gaps = 5/434 (1%) Query: 1 MTFEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSL 60 MTFE LGL+PSI+KAL Y PTPVQ KAIP AI G+DLLVSSQTGSGKTAAFMLP+L Sbjct: 1 MTFETLGLHPSILKALAGIHYDIPTPVQTKAIPLAIEGKDLLVSSQTGSGKTAAFMLPAL 60 Query: 61 HQLADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYG 120 H+ A + + +TPNQ+RQ+++A+GER R++ AQPKMLVLTPTRELALQ+ ++T++Y Sbjct: 61 HRFATQKISETSQKTPNQQRQSAKAKGERARFKAAQPKMLVLTPTRELALQIVSSTEQYS 120 Query: 121 AYMRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEA 180 A ++ R V+ILGGMPYPKQMQLL+RNPEILVATPGRLIDHM+SGKI F QL+ILVLDEA Sbjct: 121 ACLKHFRTVAILGGMPYPKQMQLLARNPEILVATPGRLIDHMQSGKIRFDQLEILVLDEA 180 Query: 181 DRMLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHE 240 DRMLDMGFIDDIE ++AATPATRQTMLFSATLDG+VG MA+ +T++ +I I SS++RHE Sbjct: 181 DRMLDMGFIDDIETVIAATPATRQTMLFSATLDGIVGKMARSVTHDAESIHITSSASRHE 240 Query: 241 NIMQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHG 300 NI Q +H+VDDL HKNRLL H L+D S+ QA++FTATKRDAD +ADRL IAGF+ AALHG Sbjct: 241 NIEQMIHYVDDLPHKNRLLAHWLQDRSLGQALVFTATKRDADLVADRLAIAGFSTAALHG 300 Query: 301 DMHQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTG 360 DM Q ARNRTL LR G+V++LVATDVAARGID+P ITHVFNYDLPKF EDYVHRIGRTG Sbjct: 301 DMPQNARNRTLAKLRDGKVKILVATDVAARGIDIPSITHVFNYDLPKFPEDYVHRIGRTG 360 Query: 361 RAGRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPRSPRKPG--GWRP 418 RAGR+G+AISLV+H++ +KRIERFTKQTIPV+V+EGFEPK + P +P K G GW+P Sbjct: 361 RAGRHGLAISLVSHSDSASMKRIERFTKQTIPVNVIEGFEPKMTFRPTAPSKRGKPGWKP 420 Query: 419 GDGR---SNNGPRY 429 G + S G R+ Sbjct: 421 GSRKQAASKTGQRH 434 >B5S6N0.1 B5S6N0_RALSO Atp-dependent rna helicase protein EC=3.-.-.- Length = 633 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/500 (58%), Positives = 365/500 (73%), Gaps = 15/500 (3%) Query: 3 FEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSLHQ 62 F ALGL+ I++AL E YT+PTPVQ +AIPA +SG+DLLV+SQTGSGKTAAF+LP++ + Sbjct: 64 FAALGLDERIVRALGEVNYTTPTPVQAQAIPACLSGRDLLVTSQTGSGKTAAFILPAIQR 123 Query: 63 LADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYGAY 122 +++ P PQ P + R +G RPR PA+P +LVLTPTRELALQVTTAT +YG + Sbjct: 124 ISEQP-EPQ---RPRVDGAPQRVKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRH 179 Query: 123 MRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEADR 182 +RR+ SILGGMPYPKQ+ +L+R P+I++ATPGRL+DH++SG+ID S L +LV DEADR Sbjct: 180 LRRIVCASILGGMPYPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADR 239 Query: 183 MLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHENI 242 MLDMGF DDIE IV ATP +RQ ++FSAT+D + +A+R+ P I+IA++ NI Sbjct: 240 MLDMGFADDIEAIVGATPESRQMLMFSATMDRRIEQLAERMMREPQRIEIAAARVDQSNI 299 Query: 243 MQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHGDM 302 +R+HF DD+SHK +LLDHLLRD S+ QA++FTATKRDAD++A+RL GFAA ALHGDM Sbjct: 300 EERLHFTDDMSHKQQLLDHLLRDASLKQAIVFTATKRDADSLAERLTETGFAAGALHGDM 359 Query: 303 HQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTGRA 362 HQGARNRTL +LRRG +R+LVATDVAARGIDVP ITHV N+DLPK AEDYVHRIGRTGRA Sbjct: 360 HQGARNRTLTALRRGHLRILVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRA 419 Query: 363 GRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPRS--PRKPGGWRPGD 420 GR+G+AI+LVNH + Q +RIERF + I VVEG EPK+S PR PR G Sbjct: 420 GRSGIAINLVNHGDTFQWRRIERFVDRRINATVVEGLEPKRSPKPRREGPRPGGDRGFRG 479 Query: 421 GRSNNGPRYGAGNREGGGHREGGFGGNREGGYNREGRSFGGAKPGNGPRRE--GGGGGGY 478 G NG R+G G R+G GGN EG + RSFGG + PRR+ GG GY Sbjct: 480 GNGGNGGGNWRQQRDGQGARQGN-GGNSEGRFQ---RSFGGDRDSFAPRRDDRGGDRNGY 535 Query: 479 KGNGGGFRAD---GPRRSYG 495 +G + D PR+SYG Sbjct: 536 QGGQRDWNRDEQRAPRQSYG 555 >B5SF00.1 B5SF00_RALSO Atp-dependent rna helicase protein EC=3.-.-.- Length = 631 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/500 (58%), Positives = 365/500 (73%), Gaps = 15/500 (3%) Query: 3 FEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSLHQ 62 F ALGL+ I++AL E YT+PTPVQ +AIPA +SG+DLLV+SQTGSGKTAAF+LP++ + Sbjct: 64 FAALGLDERIVRALGEVNYTTPTPVQAQAIPACLSGRDLLVTSQTGSGKTAAFILPAIQR 123 Query: 63 LADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYGAY 122 +++ P PQ P + R +G RPR PA+P +LVLTPTRELALQVTTAT +YG + Sbjct: 124 ISEQP-EPQ---RPRVDGAPQRVKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRH 179 Query: 123 MRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEADR 182 +RR+ SILGGMPYPKQ+ +L+R P+I++ATPGRL+DH++SG+ID S L +LV DEADR Sbjct: 180 LRRIVCASILGGMPYPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADR 239 Query: 183 MLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHENI 242 MLDMGF DDIE IV ATP +RQ ++FSAT+D + +A+R+ P I+IA++ NI Sbjct: 240 MLDMGFADDIEAIVGATPESRQMLMFSATMDRRIEQLAERMMREPQRIEIAAARVDQSNI 299 Query: 243 MQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHGDM 302 +R+HF DD+SHK +LLDHLLRD S+ QA++FTATKRDAD++A+RL GFAA ALHGDM Sbjct: 300 EERLHFTDDMSHKQQLLDHLLRDASLKQAIVFTATKRDADSLAERLTETGFAAGALHGDM 359 Query: 303 HQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTGRA 362 HQGARNRTL +LRRG +R+LVATDVAARGIDVP ITHV N+DLPK AEDYVHRIGRTGRA Sbjct: 360 HQGARNRTLTALRRGHLRILVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRA 419 Query: 363 GRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPR--SPRKPGGWRPGD 420 GR+G+AI+LVNH + Q +RIERF + I VVEG EPK+S PR PR G Sbjct: 420 GRSGIAINLVNHGDTFQWRRIERFVDRRINATVVEGLEPKRSPKPRREGPRPGGDRGFRG 479 Query: 421 GRSNNGPRYGAGNREGGGHREGGFGGNREGGYNREGRSFGGAKPGNGPRRE--GGGGGGY 478 G NG R+G G R+G GGN EG + RSFGG + PRR+ GG GY Sbjct: 480 GNGGNGGGNWRQQRDGQGARQGN-GGNSEGRFQ---RSFGGDRDSFAPRRDDRGGDRNGY 535 Query: 479 KGNGGGFRAD---GPRRSYG 495 +G + D PR+SYG Sbjct: 536 QGGQRDWNRDEQRAPRQSYG 555 >A3RP86.1 A3RP86_RALSO ATP-dependent RNA helicase Length = 631 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/500 (58%), Positives = 365/500 (73%), Gaps = 15/500 (3%) Query: 3 FEALGLNPSIIKALTEAGYTSPTPVQEKAIPAAISGQDLLVSSQTGSGKTAAFMLPSLHQ 62 F ALGL+ I++AL E YT+PTPVQ +AIPA +SG+DLLV+SQTGSGKTAAF+LP++ + Sbjct: 64 FAALGLDERIVRALGEVNYTTPTPVQAQAIPACLSGRDLLVTSQTGSGKTAAFILPAIQR 123 Query: 63 LADLPPAPQAARTPNQERQASRARGERPRYQPAQPKMLVLTPTRELALQVTTATDKYGAY 122 +++ P PQ P + R +G RPR PA+P +LVLTPTRELALQVTTAT +YG + Sbjct: 124 ISEQP-EPQ---RPRVDGAPQRVKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRH 179 Query: 123 MRRVRVVSILGGMPYPKQMQLLSRNPEILVATPGRLIDHMESGKIDFSQLQILVLDEADR 182 +RR+ SILGGMPYPKQ+ +L+R P+I++ATPGRL+DH++SG+ID S L +LV DEADR Sbjct: 180 LRRIVCASILGGMPYPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADR 239 Query: 183 MLDMGFIDDIEKIVAATPATRQTMLFSATLDGVVGNMAKRITNNPLTIQIASSSTRHENI 242 MLDMGF DDIE IV ATP +RQ ++FSAT+D + +A+R+ P I+IA++ NI Sbjct: 240 MLDMGFADDIEAIVGATPESRQMLMFSATMDRRIEQLAERMMREPQRIEIAAARVDQSNI 299 Query: 243 MQRVHFVDDLSHKNRLLDHLLRDTSIDQAVIFTATKRDADTIADRLNIAGFAAAALHGDM 302 +R+HF DD+SHK +LLDHLLRD S+ QA++FTATKRDAD++A+RL GFAA ALHGDM Sbjct: 300 EERLHFTDDMSHKQQLLDHLLRDASLKQAIVFTATKRDADSLAERLTETGFAAGALHGDM 359 Query: 303 HQGARNRTLNSLRRGQVRMLVATDVAARGIDVPGITHVFNYDLPKFAEDYVHRIGRTGRA 362 HQGARNRTL +LRRG +R+LVATDVAARGIDVP ITHV N+DLPK AEDYVHRIGRTGRA Sbjct: 360 HQGARNRTLTALRRGHLRILVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRA 419 Query: 363 GRNGVAISLVNHAEGMQVKRIERFTKQTIPVDVVEGFEPKKSAAPR--SPRKPGGWRPGD 420 GR+G+AI+LVNH + Q +RIERF + I VVEG EPK+S PR PR G Sbjct: 420 GRSGIAINLVNHGDTFQWRRIERFVDRRINATVVEGLEPKRSPKPRREGPRPGGDRGFRG 479 Query: 421 GRSNNGPRYGAGNREGGGHREGGFGGNREGGYNREGRSFGGAKPGNGPRRE--GGGGGGY 478 G NG R+G G R+G GGN EG + RSFGG + PRR+ GG GY Sbjct: 480 GNGGNGGGNWRQQRDGQGARQGN-GGNSEGRFQ---RSFGGDRDSFAPRRDDRGGDRNGY 535 Query: 479 KGNGGGFRAD---GPRRSYG 495 +G + D PR+SYG Sbjct: 536 QGGQRDWNRDEQRAPRQSYG 555