BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0020.p (89 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J039.1 D8J039_HERSS 50S ribosomal protein L31 type B 182 1e-44 A6SVL3.1 RL31B_JANMA 50S ribosomal protein L31 type B 159 2e-37 A4G310.1 RL31B_HERAR 50S ribosomal protein L31 type B 154 3e-36 F1W3N1.1 F1W3N1_9BURK LSU ribosomal protein L31p 154 3e-36 C3XAD4.1 C3XAD4_OXAFO 50S ribosomal protein L31 type B 152 1e-35 B2T3R7.1 RL31B_BURPP 50S ribosomal protein L31 type B 150 8e-35 D5NBT6.1 D5NBT6_9BURK 50S ribosomal protein L31 type B 146 8e-34 Q13Z86.1 RL31B_BURXL 50S ribosomal protein L31 type B 146 8e-34 C3X1L2.1 C3X1L2_OXAFO 50S ribosomal protein L31 type B 146 1e-33 E8YPQ2.1 E8YPQ2_9BURK 50S ribosomal protein L31 145 1e-33 >D8J039.1 D8J039_HERSS 50S ribosomal protein L31 type B Length = 89 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK Sbjct: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSKA 89 HKIVDTAGRVEKFRQKFGSVGSKTAVSKA Sbjct: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSKA 89 >A6SVL3.1 RL31B_JANMA 50S ribosomal protein L31 type B Length = 88 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/88 (85%), Positives = 83/88 (94%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYR+V+F DMSNDFKFITRSTI TRET EFEG YPLVKIEVSSESHPFYTGK Sbjct: 1 MKEGIHPDYRDVVFQDMSNDFKFITRSTIQTRETIEFEGASYPLVKIEVSSESHPFYTGK 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 HKIVDTAGRV+KFR+KFG+VGSKT+V++ Sbjct: 61 HKIVDTAGRVDKFRKKFGTVGSKTSVAE 88 >A4G310.1 RL31B_HERAR 50S ribosomal protein L31 type B Length = 88 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 73/88 (82%), Positives = 82/88 (93%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MK GIHP+YREVLFHD+SNDFKFITRSTI TRE EFEG +YPLVKIEVSSESHPFYTGK Sbjct: 1 MKAGIHPEYREVLFHDVSNDFKFITRSTINTREKIEFEGTEYPLVKIEVSSESHPFYTGK 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 HKIVDTAGRV+KFR+KFG+VGSKT +++ Sbjct: 61 HKIVDTAGRVDKFRKKFGTVGSKTQMAE 88 >F1W3N1.1 F1W3N1_9BURK LSU ribosomal protein L31p Length = 89 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 72/88 (81%), Positives = 81/88 (92%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MK GIHP+YREVL HD+S DFKFITRST+ TRE AEFEGKQYPLVKIEVSSESHPFYTGK Sbjct: 1 MKAGIHPNYREVLVHDLSCDFKFITRSTVQTREMAEFEGKQYPLVKIEVSSESHPFYTGK 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 HKIVDTAGRV+KFR+KFG VGS+T +++ Sbjct: 61 HKIVDTAGRVDKFRKKFGVVGSRTQIAQ 88 >C3XAD4.1 C3XAD4_OXAFO 50S ribosomal protein L31 type B Length = 86 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 72/85 (84%), Positives = 79/85 (92%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYREV+F D+S DFKFITRSTI TRET FEGK+YPLVK+EVS+ESHPFYTGK Sbjct: 1 MKEGIHPDYREVVFQDVSCDFKFITRSTIATRETIMFEGKEYPLVKVEVSAESHPFYTGK 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTA 85 +KIVDTAGRVEKFRQKFG+VGSK A Sbjct: 61 YKIVDTAGRVEKFRQKFGNVGSKVA 85 >B2T3R7.1 RL31B_BURPP 50S ribosomal protein L31 type B Length = 88 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 72/88 (81%), Positives = 78/88 (88%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYREVLF D+SNDFKF+TRSTI TRETAEFEGK YPL KIEVSSESHPFYTG+ Sbjct: 1 MKEGIHPDYREVLFIDVSNDFKFVTRSTIQTRETAEFEGKTYPLAKIEVSSESHPFYTGQ 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 KI+DTAGRVEKFR KFGS + AV+K Sbjct: 61 QKIMDTAGRVEKFRNKFGSRATGKAVAK 88 >D5NBT6.1 D5NBT6_9BURK 50S ribosomal protein L31 type B Length = 88 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 70/88 (79%), Positives = 76/88 (86%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYREVLF D+SNDFKF+TRSTI TRETAEFEGK YPL KIEVSSESHPFYTG+ Sbjct: 1 MKEGIHPDYREVLFIDVSNDFKFVTRSTIQTRETAEFEGKTYPLAKIEVSSESHPFYTGQ 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 KI+DTAGRVEKFR KFGS + +K Sbjct: 61 QKIMDTAGRVEKFRNKFGSRATGKVAAK 88 >Q13Z86.1 RL31B_BURXL 50S ribosomal protein L31 type B Length = 88 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 70/88 (79%), Positives = 76/88 (86%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYREVLF D+SNDFKF+TRSTI TRETAEFEGK YPL KIEVSSESHPFYTG+ Sbjct: 1 MKEGIHPDYREVLFIDVSNDFKFVTRSTIQTRETAEFEGKTYPLAKIEVSSESHPFYTGQ 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 KI+DTAGRVEKFR KFGS + +K Sbjct: 61 QKIMDTAGRVEKFRNKFGSRATGKVAAK 88 >C3X1L2.1 C3X1L2_OXAFO 50S ribosomal protein L31 type B Length = 87 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 69/85 (81%), Positives = 78/85 (91%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHP+YR+V+F D+S DFKFITRSTI TRET FEGK+YPLVK+EVS+ESHPFYTGK Sbjct: 1 MKEGIHPEYRDVVFQDVSCDFKFITRSTIPTRETIMFEGKEYPLVKVEVSAESHPFYTGK 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTA 85 +KIVDTAGRVEKFRQKFG VGSK + Sbjct: 61 YKIVDTAGRVEKFRQKFGKVGSKVS 85 >E8YPQ2.1 E8YPQ2_9BURK 50S ribosomal protein L31 Length = 88 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 69/88 (78%), Positives = 76/88 (86%) Query: 1 MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60 MKEGIHPDYREVLF D+SNDFKF+TRSTI TRETAEF GK YPL KIEVSSESHPFYTG+ Sbjct: 1 MKEGIHPDYREVLFVDVSNDFKFVTRSTIQTRETAEFNGKTYPLAKIEVSSESHPFYTGQ 60 Query: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVSK 88 KI+DTAGRVEKFR KFG+ + A +K Sbjct: 61 QKIMDTAGRVEKFRNKFGARATGKAAAK 88