BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0019.p (412 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J040.1 D8J040_HERSS Transcription termination factor Rho EC=3.... 839 0.0 A6SVL5.1 A6SVL5_JANMA Transcription termination factor Rho EC=3.... 815 0.0 A4G312.1 A4G312_HERAR Transcription termination factor Rho EC=3.... 814 0.0 C3X6Y2.1 C3X6Y2_OXAFO Transcription termination factor Rho EC=3.... 782 0.0 C3X7C7.1 C3X7C7_OXAFO Transcription termination factor Rho EC=3.... 776 0.0 E5AQG8.1 E5AQG8_BURRH Transcription termination factor Rho EC=3.... 757 0.0 B2JG56.1 B2JG56_BURP8 Transcription termination factor Rho EC=3.... 756 0.0 Q63UV1.1 Q63UV1_BURPS Transcription termination factor Rho EC=3.... 756 0.0 Q3JRN3.1 Q3JRN3_BURP1 Transcription termination factor Rho EC=3.... 756 0.0 A3NVZ1.1 A3NVZ1_BURP0 Transcription termination factor Rho EC=3.... 756 0.0 >D8J040.1 D8J040_HERSS Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/412 (100%), Positives = 412/412 (100%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP Sbjct: 9 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK Sbjct: 69 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML Sbjct: 129 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE Sbjct: 189 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE Sbjct: 249 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE Sbjct: 309 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRGN 412 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRGN Sbjct: 369 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRGN 420 >A6SVL5.1 A6SVL5_JANMA Transcription termination factor Rho EC=3.6.4.- Length = 421 Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/412 (96%), Positives = 407/412 (98%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVSALLEMAISLDI+NAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP Sbjct: 9 LHVSALLEMAISLDIDNAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGE PEASK Sbjct: 69 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGESPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 HRILFENLTPLHPNK L LERDMRGEENITGRIIDLIAP+G+GQRGLLVASPKSGKSVML Sbjct: 129 HRILFENLTPLHPNKPLLLERDMRGEENITGRIIDLIAPIGKGQRGLLVASPKSGKSVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAITTNHP+ VMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE Sbjct: 189 QHIAHAITTNHPEAVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARN+E Sbjct: 249 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL+KSGTRRE Sbjct: 309 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRGN 412 ELLIKPDQLQKIWVLRKL+Y MDEIEAMEFILDKMK+TKNNAEFFDMMRRGN Sbjct: 369 ELLIKPDQLQKIWVLRKLLYGMDEIEAMEFILDKMKATKNNAEFFDMMRRGN 420 >A4G312.1 A4G312_HERAR Transcription termination factor Rho EC=3.6.4.- Length = 421 Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/412 (96%), Positives = 407/412 (98%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVSALLEMAISLDI+NAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP Sbjct: 9 LHVSALLEMAISLDIDNAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGE PEASK Sbjct: 69 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEAPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 HRILFENLTPLHPNK L LERDMRGEENITGR+IDLIAP+G+GQRGLLVASPKSGKSV+L Sbjct: 129 HRILFENLTPLHPNKPLLLERDMRGEENITGRVIDLIAPIGKGQRGLLVASPKSGKSVIL 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAITTNHPD VMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE Sbjct: 189 QHIAHAITTNHPDVVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARN+E Sbjct: 249 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL+KSGTRRE Sbjct: 309 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRGN 412 ELLIKPDQLQKIWVLRKL+Y MDEIEAMEFILDKMK+TKNNAEFFDMMRRGN Sbjct: 369 ELLIKPDQLQKIWVLRKLLYGMDEIEAMEFILDKMKATKNNAEFFDMMRRGN 420 >C3X6Y2.1 C3X6Y2_OXAFO Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/411 (90%), Positives = 402/411 (97%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVSALLEMA+SLDI+NAAR+RKQELMFAILKKRAK+GEQ++GDGALE+LPDGFGFLRSP Sbjct: 9 LHVSALLEMALSLDIDNAARMRKQELMFAILKKRAKAGEQVYGDGALEILPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNG PPEASK Sbjct: 69 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGAPPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 HR+LFENLTPLHP++ L+LERD+ +ENITGRIID+IAP+G+GQRGLLVASPKSGK+V+L Sbjct: 129 HRMLFENLTPLHPDEPLKLERDISSQENITGRIIDMIAPIGKGQRGLLVASPKSGKTVIL 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QH+AHAIT NHPD + VLLIDERPEEVTEMQRSVRGEV+ASTFDEPATRHVQVAEMVLE Sbjct: 189 QHMAHAITANHPDVTLFVLLIDERPEEVTEMQRSVRGEVIASTFDEPATRHVQVAEMVLE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE Sbjct: 249 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTIIATAL+ETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL+KSGTRRE Sbjct: 309 EGGSLTIIATALVETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 ELLIKPDQLQKIW+LRKL+Y MDEIEAMEFILDKMK+TKNNA+FFD+MRRG Sbjct: 369 ELLIKPDQLQKIWILRKLLYGMDEIEAMEFILDKMKATKNNADFFDLMRRG 419 >C3X7C7.1 C3X7C7_OXAFO Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/411 (90%), Positives = 401/411 (97%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVSALLEMA+ L+I+NAAR+RKQELMFAILKKRAK+GEQ++GDGALE+LPDGFGFLRSP Sbjct: 9 LHVSALLEMALGLEIDNAARMRKQELMFAILKKRAKAGEQVYGDGALEILPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNG PPE SK Sbjct: 69 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGAPPEQSK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 HR+LFENLTPLHP++ L+LER++ +ENITGRIID+IAP+G+GQRGLLVASPKSGK+VML Sbjct: 129 HRLLFENLTPLHPDEPLKLEREISSQENITGRIIDMIAPIGKGQRGLLVASPKSGKTVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QH+AHAITTNHPD + VLLIDERPEEVTEMQRSVRGEV+ASTFDEPATRHVQVAEMVLE Sbjct: 189 QHMAHAITTNHPDVTLFVLLIDERPEEVTEMQRSVRGEVIASTFDEPATRHVQVAEMVLE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE Sbjct: 249 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTIIATAL+ETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYP+INL+KSGTRRE Sbjct: 309 EGGSLTIIATALVETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 ELLIKPDQLQKIW+LRKL+Y MDEIEAMEFILDKMK+TKNNA+FFD+MRRG Sbjct: 369 ELLIKPDQLQKIWILRKLLYGMDEIEAMEFILDKMKATKNNADFFDLMRRG 419 >E5AQG8.1 E5AQG8_BURRH Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/410 (88%), Positives = 391/410 (95%) Query: 2 HVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSPD 61 HVSAL+EMA L+IENA RLRKQELMFAILKKRAK+GE IFGDG LEVLPDGFGFLRSP+ Sbjct: 10 HVSALIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSPE 69 Query: 62 ASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASKH 121 SY+ASTDDIYISPSQIRRFNLHTGD+IEGEVRTPKDGERYFALVKVDKVNG+PPEASKH Sbjct: 70 TSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASKH 129 Query: 122 RILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVMLQ 181 +I+FENLTPLHPNK L LERD+RGEENIT RIID+IAP+G+GQRGLLVASPKSGK+VMLQ Sbjct: 130 KIMFENLTPLHPNKPLSLERDVRGEENITSRIIDMIAPIGKGQRGLLVASPKSGKTVMLQ 189 Query: 182 HIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLEK 241 HIAHAI +NHPD + VLLIDERPEEVTEMQRSV GEV+ASTFDEPA+RHVQVAEMV+EK Sbjct: 190 HIAHAIKSNHPDVTLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPASRHVQVAEMVIEK 249 Query: 242 AKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVEE 301 AKRLVEMK DVVILLDSITRLARAYNTV+PASGKVLTGGVDANALQRPKRFFGAARNVEE Sbjct: 250 AKRLVEMKHDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNVEE 309 Query: 302 GGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRREE 361 GGSLTII TALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYP+INL+KSGTRREE Sbjct: 310 GGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRREE 369 Query: 362 LLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 LLIKP+ LQKIWVLRK ++DMDEIEAMEF+LDK+K TK+N+EFFDMMRRG Sbjct: 370 LLIKPEILQKIWVLRKFIHDMDEIEAMEFLLDKLKQTKSNSEFFDMMRRG 419 >B2JG56.1 B2JG56_BURP8 Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/411 (87%), Positives = 392/411 (95%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVS L+EMA L+IE+A RLRKQELMFAILKKRAK+GE IFGDG LEVLPDGFGFLRSP Sbjct: 9 LHVSQLIEMANGLEIESANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 + SY+ASTDDIYISPSQIRRFNLHTGD+IEGEVRTPKDGERYFALVKVDKVNG+PPEASK Sbjct: 69 ETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 H+I+FENLTPLHPNK+L LER+MRGEEN+TGRIID+IAP+G+GQRGLLVASPKSGK+VML Sbjct: 129 HKIMFENLTPLHPNKVLLLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASPKSGKTVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAI NHPD ++ VLLIDERPEEVTEMQRSV GEV+ASTFDEPA RHVQVAEMV+E Sbjct: 189 QHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPAARHVQVAEMVIE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMK DVVILLDSITRLARAYNTV+PASGKVLTGGVDANALQRPKRFFGAARN+E Sbjct: 249 KAKRLVEMKNDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNIE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTII TALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYP+INL+KSGTRRE Sbjct: 309 EGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 ELLIKP+ LQKIWVLRK ++DMDE+EAMEF+LDK++ TKNNAEFFDMMRRG Sbjct: 369 ELLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDMMRRG 419 >Q63UV1.1 Q63UV1_BURPS Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/411 (87%), Positives = 392/411 (95%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVS L+EMA L+IENA RLRKQELMFAILKKRAK+GE IFGDG LEVLPDGFGFLRSP Sbjct: 9 LHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 + SY+ASTDDIYISPSQIRRFNLHTGD+IEGEVRTPKDGERYFALVKVDKVNG+PPEASK Sbjct: 69 EMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 H+I+FENLTPLHPNK L LER+MRGEEN+TGRIID+IAP+G+GQRGLLVASPKSGK+VML Sbjct: 129 HKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASPKSGKTVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAI NHPD ++ VLLIDERPEEVTEMQRSV GEV+ASTFDEPATRHVQVAEMV+E Sbjct: 189 QHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHVQVAEMVIE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMK DVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARN+E Sbjct: 249 KAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTII TALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYP+INL+KSGTRRE Sbjct: 309 EGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 E+LIKP+ LQKIWVLRK ++DMDE+EAMEF+LDK++ TKNNAEFFD+MRRG Sbjct: 369 EMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRG 419 >Q3JRN3.1 Q3JRN3_BURP1 Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/411 (87%), Positives = 392/411 (95%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVS L+EMA L+IENA RLRKQELMFAILKKRAK+GE IFGDG LEVLPDGFGFLRSP Sbjct: 9 LHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 + SY+ASTDDIYISPSQIRRFNLHTGD+IEGEVRTPKDGERYFALVKVDKVNG+PPEASK Sbjct: 69 EMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 H+I+FENLTPLHPNK L LER+MRGEEN+TGRIID+IAP+G+GQRGLLVASPKSGK+VML Sbjct: 129 HKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASPKSGKTVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAI NHPD ++ VLLIDERPEEVTEMQRSV GEV+ASTFDEPATRHVQVAEMV+E Sbjct: 189 QHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHVQVAEMVIE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMK DVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARN+E Sbjct: 249 KAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTII TALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYP+INL+KSGTRRE Sbjct: 309 EGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 E+LIKP+ LQKIWVLRK ++DMDE+EAMEF+LDK++ TKNNAEFFD+MRRG Sbjct: 369 EMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRG 419 >A3NVZ1.1 A3NVZ1_BURP0 Transcription termination factor Rho EC=3.6.4.- Length = 420 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/411 (87%), Positives = 392/411 (95%) Query: 1 MHVSALLEMAISLDIENAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPDGFGFLRSP 60 +HVS L+EMA L+IENA RLRKQELMFAILKKRAK+GE IFGDG LEVLPDGFGFLRSP Sbjct: 9 LHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSP 68 Query: 61 DASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVNGEPPEASK 120 + SY+ASTDDIYISPSQIRRFNLHTGD+IEGEVRTPKDGERYFALVKVDKVNG+PPEASK Sbjct: 69 EMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASK 128 Query: 121 HRILFENLTPLHPNKLLQLERDMRGEENITGRIIDLIAPVGRGQRGLLVASPKSGKSVML 180 H+I+FENLTPLHPNK L LER+MRGEEN+TGRIID+IAP+G+GQRGLLVASPKSGK+VML Sbjct: 129 HKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASPKSGKTVML 188 Query: 181 QHIAHAITTNHPDTVMIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHVQVAEMVLE 240 QHIAHAI NHPD ++ VLLIDERPEEVTEMQRSV GEV+ASTFDEPATRHVQVAEMV+E Sbjct: 189 QHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHVQVAEMVIE 248 Query: 241 KAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNVE 300 KAKRLVEMK DVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARN+E Sbjct: 249 KAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIE 308 Query: 301 EGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINLSKSGTRRE 360 EGGSLTII TALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYP+INL+KSGTRRE Sbjct: 309 EGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRRE 368 Query: 361 ELLIKPDQLQKIWVLRKLMYDMDEIEAMEFILDKMKSTKNNAEFFDMMRRG 411 E+LIKP+ LQKIWVLRK ++DMDE+EAMEF+LDK++ TKNNAEFFD+MRRG Sbjct: 369 EMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRG 419