BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0009.p (598 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J049.1 D8J049_HERSS DNA primase protein EC=2.7.7.- 1221 0.0 A6SV85.1 A6SV85_JANMA DNA primase EC=2.7.7.- 915 0.0 A4G2C1.1 A4G2C1_HERAR DNA primase EC=2.7.7.- 907 0.0 F1VZ23.1 F1VZ23_9BURK DNA primase 882 0.0 C3X4K7.1 C3X4K7_OXAFO DNA primase 724 0.0 C3XAR4.1 C3XAR4_OXAFO DNA primase 711 0.0 B3R5D9.1 B3R5D9_CUPTR DNA PRIMASE EC=2.7.7.- 699 0.0 Q0K866.1 Q0K866_CUPNH DNA primase EC=2.7.7.- 699 0.0 Q1LK42.1 Q1LK42_RALME DNA primase EC=2.7.7.- 689 0.0 Q474B7.1 Q474B7_CUPPJ DNA primase 687 0.0 >D8J049.1 D8J049_HERSS DNA primase protein EC=2.7.7.- Length = 598 Score = 1221 bits (3158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/598 (99%), Positives = 598/598 (100%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM Sbjct: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE Sbjct: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF Sbjct: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR Sbjct: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE Sbjct: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT Sbjct: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA Sbjct: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV Sbjct: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVAAG 598 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVAAG Sbjct: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVAAG 598 >A6SV85.1 A6SV85_JANMA DNA primase EC=2.7.7.- Length = 599 Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/593 (76%), Positives = 515/593 (86%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSGMGFVEAVKDLAQNVGM+VPE ED +P AQR E QAKSMALS+ M Sbjct: 61 CGAHGTAIGFLIEYSGMGFVEAVKDLAQNVGMIVPEAEDRLPPAQRAEHQAKSMALSEAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A D+YR QLR A+ A YL GRGLTGEIAAR+G+GY+PD WD LR VFPDY+ EALVE Sbjct: 121 TQACDYYRQQLRHAERAKNYLIGRGLTGEIAARYGMGYAPDGWDGLRSVFPDYEVEALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 SGLVIDK+EE GA+RKRYDRFR RIMFPIRNTKGQVIGFGGRV+D GEPKYLNSPETPLF Sbjct: 181 SGLVIDKAEEEGANRKRYDRFRDRIMFPIRNTKGQVIGFGGRVLDNGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKL+R Sbjct: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLLR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTDQVIFSFDGD AGRRAARRALEA LPHA DNK IKFLFLP EHDPDSY+RE+G AFE Sbjct: 301 QTDQVIFSFDGDKAGRRAARRALEASLPHAGDNKVIKFLFLPSEHDPDSYIRELGTEAFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 +Q+++A+PLSQFLL+E +G+NDL TPEGRA AQF AKPLLQALP S+LRLQIVRS+AQ T Sbjct: 361 KQVQDAMPLSQFLLKEAVGDNDLGTPEGRARAQFDAKPLLQALPPSSLRLQIVRSLAQIT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 +STPAE+E LFEL +P++RVRAAP R+KR AP GLERQIMRLLV+HP LAA++D AL+ Sbjct: 421 ESTPAEIEALFELAQPISRVRAAPPRTKRAAPQGLERQIMRLLVSHPILAAEMDQAALDI 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 A AP++AEML LV +++ MG QANFA L E LR G +F+ +IAEIAAE ES+ + Sbjct: 481 AAHFAPERAEMLVQLVTLSREMGPQANFAILAELLRSSGSDFEPLIAEIAAEPESDVALA 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGA 593 R E+ GAIRQ +++AL +E+ LV + L E+ + R+REL +++ L+RQA A Sbjct: 541 RLELAGAIRQTKMQALRDELDQLVAAGLVGEQAQARFRELTLQQDQLRRQAQA 593 >A4G2C1.1 A4G2C1_HERAR DNA primase EC=2.7.7.- Length = 602 Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/599 (75%), Positives = 511/599 (85%), Gaps = 3/599 (0%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSGMGFVEAVKDLAQNVGM+VPE ED +P AQR E+QAKSMALS+ M Sbjct: 61 CGAHGTAIGFLIEYSGMGFVEAVKDLAQNVGMLVPEAEDRLPPAQRAEQQAKSMALSEAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 RA DFYR QLR A+ A YL GRGLTGE+AAR+G+GY+PD WD LR VFPDY+ +ALVE Sbjct: 121 NRACDFYRQQLRHAEGAKNYLIGRGLTGEVAARYGMGYAPDGWDGLRAVFPDYELDALVE 180 Query: 181 SGLVIDKSEEGGA---HRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPET 237 GLVIDK+EE GA RKRYDRFR RIMFPIRN+KGQVIGFGGRVM GEPKYLNSPET Sbjct: 181 CGLVIDKAEEEGADHRQRKRYDRFRDRIMFPIRNSKGQVIGFGGRVMGDGEPKYLNSPET 240 Query: 238 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQK 297 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACT IHVQK Sbjct: 241 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTSIHVQK 300 Query: 298 LVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAP 357 L+RQTDQVIFSFDGD AGRRAARRALEA LP+A DNK IKFLFLP EHDPDSY+R MGA Sbjct: 301 LLRQTDQVIFSFDGDKAGRRAARRALEASLPYAGDNKVIKFLFLPSEHDPDSYIRAMGAE 360 Query: 358 AFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVA 417 +FE+Q+++A+PLSQFLL+E +G+NDL TPEGRA QF AKPLLQALP S+LRLQIVR +A Sbjct: 361 SFEKQVQDAMPLSQFLLKEAVGDNDLGTPEGRARTQFDAKPLLQALPPSSLRLQIVRGLA 420 Query: 418 QATQSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGA 477 Q T+STPAE+E LFEL +P++RVRAAP + KRTAPVGLERQIMRLLV HP LAA+LD A Sbjct: 421 QITESTPAEIEALFELVQPISRVRAAPPKGKRTAPVGLERQIMRLLVEHPVLAAELDQAA 480 Query: 478 LEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEF 537 L+ A AP++A+ML LV +++ MG ANFA L E LR G +FD+++AEIAAESES+ Sbjct: 481 LDVAAHFAPERADMLVQLVTMSREMGVHANFATLAELLRSSGSDFDTLVAEIAAESESDV 540 Query: 538 DVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVA 596 D R E+ GAIRQ +++ L EM+ L+ S L E+ + RYREL ++E L+RQA A +A Sbjct: 541 DAARLELAGAIRQTKMKMLATEMETLIASGLSGEQAQARYRELTLQQEQLRRQAQAEMA 599 >F1VZ23.1 F1VZ23_9BURK DNA primase Length = 598 Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/596 (73%), Positives = 498/596 (83%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSGMGFV+AVKDLAQNVGM+VPE +D +P AQR E QAKS+ALS+ M Sbjct: 61 CGAHGTAIGFLIEYSGMGFVDAVKDLAQNVGMMVPESDDKMPPAQRAEYQAKSLALSEAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A D YR QLR+A+ A YL GRGLTGEIAARFG+GY+P+ WDSLR VFPDY+ ALVE Sbjct: 121 TQACDHYRLQLRTAERAKGYLIGRGLTGEIAARFGIGYAPEGWDSLRSVFPDYELTALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 +GLVID+++E G +RKRYDRFR RIMFPIRNTKGQVIGFGGR++D GEPKYLNSPETPLF Sbjct: 181 AGLVIDRTDEEGGNRKRYDRFRDRIMFPIRNTKGQVIGFGGRILDSGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIR+AGY LVTEGYMDVVALAQLGFPQ VATLGTACT +HVQKL R Sbjct: 241 QKGSELYGLFEARQAIRDAGYVLVTEGYMDVVALAQLGFPQVVATLGTACTAVHVQKLSR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTD VIFSFDGD AGRRAARRALEA LP+A+DNKTIKFLFLP EHDPDSYVRE G FE Sbjct: 301 QTDHVIFSFDGDGAGRRAARRALEASLPYAADNKTIKFLFLPSEHDPDSYVREHGTAGFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 +Q+R+A+PLSQFLL+ + +NDL T EGRA QF AKPLLQA+PAS+LRLQIVR +AQ T Sbjct: 361 QQVRDAMPLSQFLLKVVTDDNDLTTSEGRAKVQFDAKPLLQAMPASSLRLQIVRELAQLT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 ++TP E+E LFEL P ARVRAAP R KRTAPVGLE Q+MRLLVAHP LA++LD AL+A Sbjct: 421 RTTPTEIETLFELASPAARVRAAPPRGKRTAPVGLELQVMRLLVAHPVLASELDQDALDA 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 + PD A ML LV Q MG QA+FA L EHLR GGPEFD MIAE+AAE ES+ D Sbjct: 481 MLHFVPDSAVMLMQLVVAGQEMGAQASFAMLSEHLRAGGPEFDGMIAEVAAEPESDRDAA 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVA 596 R E+ GA+RQ +++ L E+ L + +E R RYREL ++E L+R A A ++ Sbjct: 541 RLELAGAVRQTKMKVLKAELDQLAAGGMGHDEARTRYRELTLKQEQLRRDAEAEIS 596 >C3X4K7.1 C3X4K7_OXAFO DNA primase Length = 603 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/593 (60%), Positives = 452/593 (76%), Gaps = 4/593 (0%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNR+DIV+VVG VQLKK GANF+GLCPFH EK+PSFTVSP KQFYHCFG Sbjct: 1 MIPQSFIQDLLNRIDIVEVVGNRVQLKKAGANFLGLCPFHTEKTPSFTVSPVKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CG +G+AI+FL+E+SG+ FVEAV++LAQ GM VP + + QR +KQAK++AL++VM Sbjct: 61 CGRNGSAITFLMEHSGLSFVEAVEELAQGAGMTVPRDDTRVSPEQRAQKQAKTLALTEVM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A+ +YR QL+ ++ AIAYLK RG++GE+A RFGLGY+P DSL+ F +Y + LVE Sbjct: 121 TQASRYYRQQLKQSEAAIAYLKKRGVSGEMAFRFGLGYAPATRDSLKNGFENYRADELVE 180 Query: 181 SGLVIDKSEEGGA---HRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPET 237 +GLVI+K E+ A +RYDRFR RIMFPIRNT+GQVI FGGR+++ GEPKYLNSPET Sbjct: 181 AGLVIEKHEDDRAVVSGERRYDRFRDRIMFPIRNTRGQVIAFGGRILEKGEPKYLNSPET 240 Query: 238 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQK 297 PLFQKGSELYGLFEARQAIREAGY LV EGYMDVVALAQLGFPQ+VATLGTACT VQK Sbjct: 241 PLFQKGSELYGLFEARQAIREAGYVLVVEGYMDVVALAQLGFPQSVATLGTACTSAQVQK 300 Query: 298 LVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAP 357 L+RQTD+++FSFDGDNAG+ AARRALEA LP SD K++ FLFLP EHDPDSYVRE GA Sbjct: 301 LMRQTDRIVFSFDGDNAGKGAARRALEASLPLVSDTKSVAFLFLPPEHDPDSYVREYGAG 360 Query: 358 AFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVA 417 AFE+Q+ A+PLS+F+L+E++ ND+ T EGRA AQ AKP QA+ SALRLQI+R + Sbjct: 361 AFEKQVEGAMPLSEFMLQELVAGNDMNTLEGRARAQHKAKPWCQAMAPSALRLQIMRKLG 420 Query: 418 QATQSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGA 477 Q TQ+ ELE E+ +PVAR R AR R VGLERQ+MRLL+ +PQ AA L Sbjct: 421 QITQTPDDELEAFLEVARPVARSRRREARLPRPPVVGLERQVMRLLLMYPQFAARLSEAD 480 Query: 478 LEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEF 537 + AI +PD+ ++L ++ + +GEQ ++A LVE+LR G + + ++ E + E E Sbjct: 481 IGAIVDFSPDKGDLLKTVLSAIRELGEQGSYATLVEYLRSGKVDCEQLVHE-TLDREYEQ 539 Query: 538 DVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQ 590 ++ E+ GA+RQ R R L EM+ L +S L EE+ RY EL +++E LK++ Sbjct: 540 ELALMELVGAVRQIRSRVLASEMEKLFSSGLVGEEENRRYYELKKQQEELKKE 592 >C3XAR4.1 C3XAR4_OXAFO DNA primase Length = 599 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/595 (61%), Positives = 449/595 (75%), Gaps = 3/595 (0%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIV+VVG +VQLKK GAN +GLCPFH EKSPSFTVSP KQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVEVVGNHVQLKKAGANLLGLCPFHTEKSPSFTVSPVKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CG +G+AI+FL+E+SG+ FVEAV++LA +VGM VPE E IP +R +KQAK++AL++VM Sbjct: 61 CGRNGSAITFLMEHSGLSFVEAVEELAGSVGMTVPEDETRIPPGERAKKQAKTLALTEVM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A+ FYR QL+ A AI YLK RG+TGEIA RFGLGY+P+ DSL+ F DY L E Sbjct: 121 TQASRFYRQQLKKAPEAIDYLKKRGVTGEIALRFGLGYAPEARDSLKNGFEDYRASELEE 180 Query: 181 SGLVIDKSEEGGAH--RKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETP 238 +GLVI+K + H KRYDRFR RIMFPIRNT+GQVIGFGGR+++ GEPKYLNSPETP Sbjct: 181 AGLVIEKQGDEAFHTSSKRYDRFRDRIMFPIRNTRGQVIGFGGRILEKGEPKYLNSPETP 240 Query: 239 LFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKL 298 LFQKG+ELYGLFEARQAIRE+GY LV EGYMDVVALAQLGFPQAVATLGTACTP+ VQKL Sbjct: 241 LFQKGNELYGLFEARQAIRESGYVLVVEGYMDVVALAQLGFPQAVATLGTACTPVQVQKL 300 Query: 299 VRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPA 358 +RQTD VIFSFDGD AGR AARRALEA LP SD K + FLFLP EHDPDSYVRE G A Sbjct: 301 MRQTDSVIFSFDGDAAGRGAARRALEASLPLVSDTKGVGFLFLPPEHDPDSYVREFGPEA 360 Query: 359 FEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQ 418 F+ +++A+PLS+FLL EI+G+N+L T EGRA AQ AK L +L SALRLQI+R +AQ Sbjct: 361 FDALVKKAMPLSEFLLEEIVGDNNLNTLEGRARAQHTAKSLCASLTPSALRLQILRRLAQ 420 Query: 419 ATQSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGAL 478 TQ+ ELE KPV + R AR+ R VGLERQ++RLL+ P+ +L + Sbjct: 421 ITQTPDGELETFLGFSKPVVQTRRIQARAPRPPVVGLERQVLRLLMMFPRFGEELSPDDI 480 Query: 479 EAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFD 538 + I +PDQ E+L ++ MGEQAN AALVEHLR G + + ++ E + E E + Sbjct: 481 DTIKGFSPDQGELLMAILNAYGVMGEQANLAALVEHLRLDGVDCEQLVQETVGQ-EFEAE 539 Query: 539 VVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGA 593 E+ GA+RQ ++R L E++ L +S+L TEE RY EL Q++E L+++ A Sbjct: 540 PALLELKGAVRQIKLRVLSSELEKLFSSSLTTEEKNRRYYELKQQQETLQKEMNA 594 >B3R5D9.1 B3R5D9_CUPTR DNA PRIMASE EC=2.7.7.- Length = 603 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/582 (64%), Positives = 437/582 (75%), Gaps = 21/582 (3%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+E+SG + EAV++LAQ+VGM VPE D +P QR E+QA+S+ALSD M Sbjct: 61 CGAHGSAIGFLMEFSGQSYPEAVRELAQSVGMTVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDY--DNEA- 177 TRA DFYR QLR A AI YLKGRGLTGEIA +FGLGY+PD+W L VF Y DN A Sbjct: 121 TRATDFYRRQLRGAPQAIQYLKGRGLTGEIAGQFGLGYAPDDWQGLETVFGSYRDDNVAA 180 Query: 178 -LVESGLVI--DKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNS 234 LVE+GL+I DK + G R RYDRFR RIMFPIRNTKG VIGFGGRVM GEPKYLNS Sbjct: 181 PLVEAGLLIESDKRDADGKPR-RYDRFRDRIMFPIRNTKGAVIGFGGRVMGQGEPKYLNS 239 Query: 235 PETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIH 294 PETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+H Sbjct: 240 PETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVH 299 Query: 295 VQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREM 354 VQKL+RQTD V+FSFDGD+AGRRAARRALEACLPH +DNKTI+FLFLP EHDPDSYVRE Sbjct: 300 VQKLLRQTDAVVFSFDGDSAGRRAARRALEACLPHVADNKTIRFLFLPAEHDPDSYVREE 359 Query: 355 GAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVR 414 G AF Q+R A+PLS+FLL+ + E DLR PEGRA AQ+ AKPLLQA+PA LRLQIVR Sbjct: 360 GREAFAAQVRNAMPLSRFLLQSVTEELDLRQPEGRARAQYEAKPLLQAMPAGGLRLQIVR 419 Query: 415 SVAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAA 471 +A AT +TPAE+E + L ARV A P R++R AP GLE+++++LL+ +P L+A Sbjct: 420 ELADATGTTPAEIEAICGLRSDPARVGRFAQPRPRARRQAPTGLEQRVIQLLMCYPALSA 479 Query: 472 DLDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAA 531 LD A + +E+L HLV G+ + NFAA EHL + S AE+ A Sbjct: 480 RLDEDARALLLDGEGGDSEVLAHLVSACDGVQGEVNFAAFSEHLAQ------SPYAEVYA 533 Query: 532 ESESEFDVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEED 573 + + V+R E+ A + D + L+ LR E D Sbjct: 534 AARTA--VLREEIEEA---PATQEFDAAITKLLAEPLRRELD 570 >Q0K866.1 Q0K866_CUPNH DNA primase EC=2.7.7.- Length = 603 Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/582 (64%), Positives = 437/582 (75%), Gaps = 21/582 (3%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+E+SG + EAV++LAQ+VGM VPE D +P QR E+QA+S+ALSD M Sbjct: 61 CGAHGSAIGFLMEFSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDY--DNEA- 177 TRA DFYR QLRSA AI YLKGRGLTGEIAA FGLGY+PD+W L VF Y DN + Sbjct: 121 TRATDFYRRQLRSAPQAIQYLKGRGLTGEIAANFGLGYAPDDWQGLEAVFGSYRDDNVSA 180 Query: 178 -LVESGLVI--DKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNS 234 LVE GL+I DK + G R RYDRFR RIMFPIRNTKG VIGFGGRVM GEPKYLNS Sbjct: 181 PLVECGLLIESDKRDADGKPR-RYDRFRDRIMFPIRNTKGAVIGFGGRVMGQGEPKYLNS 239 Query: 235 PETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIH 294 PETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+H Sbjct: 240 PETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVH 299 Query: 295 VQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREM 354 VQKL+RQTD V+FSFDGD+AGRRAARRALEACLPH +DNKTI+FLFLP EHDPDSYVRE Sbjct: 300 VQKLLRQTDAVVFSFDGDSAGRRAARRALEACLPHVADNKTIRFLFLPAEHDPDSYVREE 359 Query: 355 GAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVR 414 G AF Q+R A+PLS+FLL+ + + DLR PEGRA AQ+ AKPLLQA+PA LRLQIVR Sbjct: 360 GTEAFATQVRNAMPLSRFLLQSVTEDLDLRQPEGRARAQYEAKPLLQAMPAGGLRLQIVR 419 Query: 415 SVAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAA 471 +A AT +TPAE+E + L ARV A P R++R AP GLE+++++LL+ +P L+A Sbjct: 420 ELADATGTTPAEIEAICGLRSDPARVGRFAQPRPRTRRQAPTGLEQRVIQLLMCYPALSA 479 Query: 472 DLDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAA 531 LD A + +E+L HLV + + NFAA EHL + S AE+ A Sbjct: 480 RLDEDARALLLGGESSDSEVLAHLVEACDSVQGEVNFAAFSEHLAQ------SPYAEVYA 533 Query: 532 ESESEFDVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEED 573 + + V+R E+ A I+ D + L+ LR E D Sbjct: 534 VARAA--VLREEIEEA---PAIQDFDAAITKLLAEPLRRELD 570 >Q1LK42.1 Q1LK42_RALME DNA primase EC=2.7.7.- Length = 613 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/609 (61%), Positives = 448/609 (73%), Gaps = 19/609 (3%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+EYSG + +AV++LAQ+VG+ VPE +S+P AQR E+QA+S+AL+D M Sbjct: 61 CGAHGSAIGFLMEYSGQSYPDAVRELAQSVGLSVPEERNSLPPAQRAEQQARSLALTDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEA--- 177 TRA DFY+ QLR A AI YLKGRGLTGEIAA FGLGY+PD+W L VF Y ++A Sbjct: 121 TRATDFYKKQLRGAPQAIQYLKGRGLTGEIAAHFGLGYAPDDWQGLETVFGSYRDDAIAG 180 Query: 178 -LVESGLVIDKSEEGGAHRK--RYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNS 234 LVE+GL+I+ E+ A K RYDRFR RIMFPIRNTKG VIGFGGRVM GEPKYLNS Sbjct: 181 PLVEAGLLIESQEKRDADGKPRRYDRFRDRIMFPIRNTKGNVIGFGGRVMGQGEPKYLNS 240 Query: 235 PETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIH 294 PETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+H Sbjct: 241 PETPLFSKGTELYGLFEARHAIRENGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVH 300 Query: 295 VQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREM 354 VQKL+RQTD V+FSFDGD AGRRAARRALEACLPH +DNKTI+FLFLP EHDPDSYVRE Sbjct: 301 VQKLMRQTDAVVFSFDGDAAGRRAARRALEACLPHVADNKTIRFLFLPAEHDPDSYVREE 360 Query: 355 GAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVR 414 G AF Q++ A+PLS+FLL+ + + DLR PEGRA AQ+ AKPLLQA+PA LRLQIVR Sbjct: 361 GTDAFARQVQNAMPLSRFLLQIVTEDQDLRQPEGRARAQYEAKPLLQAMPAGGLRLQIVR 420 Query: 415 SVAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAA 471 +A T +TPAE+E + L +RV A P R++R AP GLE+++++LL+ +P LAA Sbjct: 421 ELADTTSTTPAEIEAICGLGSDSSRVGRFAQPRPRARRQAPTGLEQRVIQLLMCYPSLAA 480 Query: 472 DLDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAA 531 LD A + +E L +LV G+ + NFAA E L + P D + A Sbjct: 481 RLDGDARALLLDPQHSGSEALGYLVSACDGIQGEVNFAAFSEQLAQ-TPYADVYASARTA 539 Query: 532 --ESESEFDVVRAEMGGAIRQARIRALDEE---MQMLVTSNLRTEEDRNRY----RELMQ 582 E E + E GA+ + L+ E ++ +V++ EE + RY RE+ + Sbjct: 540 VLREEIEEEPATHEFDGAVHKLLAEPLEREQKALEAMVSAGTADEETKARYLWLSREVQR 599 Query: 583 RKEWLKRQA 591 R++ R A Sbjct: 600 RRQMGWRPA 608 >Q474B7.1 Q474B7_CUPPJ DNA primase Length = 604 Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/524 (67%), Positives = 412/524 (78%), Gaps = 9/524 (1%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+EYSG + EAV++LAQ+VGM VPE D +P QR E+QA+S+ALSD M Sbjct: 61 CGAHGSAIGFLMEYSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEA--- 177 +RA +FYR QLR A AI YLKGRGLTGEIAA+FGLGY+PD+W L VF Y ++ Sbjct: 121 SRATEFYRRQLRGAPQAIQYLKGRGLTGEIAAQFGLGYAPDDWQGLEAVFGSYRDDTIAA 180 Query: 178 -LVESGLVIDKSEEGGAHRK--RYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNS 234 LVE+GL+I+ SE+ A K RYDRFR RIMFPIRNTKG VIGFGGRV+ GEPKYLNS Sbjct: 181 PLVEAGLLIESSEKRDADGKPRRYDRFRDRIMFPIRNTKGAVIGFGGRVIGQGEPKYLNS 240 Query: 235 PETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIH 294 PETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+H Sbjct: 241 PETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVH 300 Query: 295 VQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREM 354 VQKL+RQTD V+FSFDGD AGRRAARRALEACLPH +DNK I+FLFLP EHDPDSYVRE Sbjct: 301 VQKLLRQTDSVVFSFDGDAAGRRAARRALEACLPHVADNKAIRFLFLPAEHDPDSYVREE 360 Query: 355 GAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVR 414 G AF Q+R+A+PLS+FLL+ + E D+R PEGRA AQ+ AKPLLQA+PA LRLQI+R Sbjct: 361 GTEAFAAQVRDAMPLSRFLLQAVTEEQDMRQPEGRARAQYEAKPLLQAMPACGLRLQIIR 420 Query: 415 SVAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAA 471 +A AT +TPAE+E + L AR A P R+KR AP GLE+++++LL+ +P LAA Sbjct: 421 ELADATGTTPAEIEAICGLRSDPARAGRFAQPRPRAKRQAPTGLEQRVLQLLMCYPSLAA 480 Query: 472 DLDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHL 515 LD + + AE+L HLV + Q NFAA EHL Sbjct: 481 RLDEDSRALLLDPEGADAEVLAHLVAACDEVEGQVNFAAFSEHL 524