BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0163.p         (258 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J1D1.1 D8J1D1_HERSS Putative uncharacterized protein                527   e-148

>D8J1D1.1 D8J1D1_HERSS Putative uncharacterized protein
          Length = 319

 Score =  527 bits (1358), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 257/258 (99%), Positives = 257/258 (99%)

Query: 1   MIVELIKLKLRFPKSKLIVVVTEMLKDGIFNSAMAPAQAEGHYSDLSYWQIRSYNFYQLI 60
           MIVELIKLKLRFPKSKLIVVVTEMLKDGIFNSAMAPAQAEGHYSDLSYWQIRSYNFYQLI
Sbjct: 62  MIVELIKLKLRFPKSKLIVVVTEMLKDGIFNSAMAPAQAEGHYSDLSYWQIRSYNFYQLI 121

Query: 61  PYIDGLVLYAEALIPGYKEFGKPIFYLPLAAPPGQPLRQHFPLKDKNIDAVFSGSITPTR 120
           PYIDGLVLYAEALIPGYKEFGKPIFYLPLAAPPGQPLRQHFPLKDKNIDAVFSGSIT TR
Sbjct: 122 PYIDGLVLYAEALIPGYKEFGKPIFYLPLAAPPGQPLRQHFPLKDKNIDAVFSGSITLTR 181

Query: 121 AELIERLRTRNYKVVALPSKTPEYIRDSYYARSKLVLGPKLGPETTLLSKWRAYYVLVNR 180
           AELIERLRTRNYKVVALPSKTPEYIRDSYYARSKLVLGPKLGPETTLLSKWRAYYVLVNR
Sbjct: 182 AELIERLRTRNYKVVALPSKTPEYIRDSYYARSKLVLGPKLGPETTLLSKWRAYYVLVNR 241

Query: 181 HTHIFEQVSEQTDLDEYVYFANPRRTFVDECIDLIEHPDSFPLSRFNHFKESPELNYVDI 240
           HTHIFEQVSEQTDLDEYVYFANPRRTFVDECIDLIEHPDSFPLSRFNHFKESPELNYVDI
Sbjct: 242 HTHIFEQVSEQTDLDEYVYFANPRRTFVDECIDLIEHPDSFPLSRFNHFKESPELNYVDI 301

Query: 241 FLKLKQFLTTSKATWFTT 258
           FLKLKQFLTTSKATWFTT
Sbjct: 302 FLKLKQFLTTSKATWFTT 319