BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0092.p (255 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J161.1 D8J161_HERSS GntR family transcription regulator protein 509 e-142 E3HF41.1 E3HF41_ACHXA Bacterial regulatory protein, GntR family ... 311 6e-83 Q0EE51.1 Q0EE51_PSESF Transcriptional regulator of GntR family 308 5e-82 D7I3T0.1 D7I3T0_PSESS Predicted D-glucarate or D-galactorate reg... 307 8e-82 Q87WJ6.1 Q87WJ6_PSESM Transcriptional regulator, GntR family 307 1e-81 Q48E19.1 Q48E19_PSE14 Transcriptional regulator, GntR family 307 1e-81 E2M7E4.1 E2M7E4_PSESM Transcriptional regulator, GntR family 307 1e-81 D4XJ90.1 D4XJ90_9BURK GntR family transcriptional regulator 307 1e-81 Q4ZNL4.1 Q4ZNL4_PSEU2 Regulatory protein, GntR:Bacterial regulat... 306 2e-81 Q39I43.1 Q39I43_BURS3 Transcriptional regulator, GntR family 303 1e-80 >D8J161.1 D8J161_HERSS GntR family transcription regulator protein Length = 255 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 253/255 (99%), Positives = 254/255 (99%) Query: 1 MDVSDTPTPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVV 60 MDVSDTP PLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVV Sbjct: 1 MDVSDTPNPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVV 60 Query: 61 REAISRLQAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETA 120 REAISRLQAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETA Sbjct: 61 REAISRLQAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETA 120 Query: 121 GLAAARRTDEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLG 180 GLAAARRT+EQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLG Sbjct: 121 GLAAARRTEEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLG 180 Query: 181 MGVIPRKRINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERL 240 MGVIPRKRINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERL Sbjct: 181 MGVIPRKRINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERL 240 Query: 241 RRAQQEAESGSASAA 255 RRAQQEAESGSASAA Sbjct: 241 RRAQQEAESGSASAA 255 >E3HF41.1 E3HF41_ACHXA Bacterial regulatory protein, GntR family protein 61 Length = 242 Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 154/241 (63%), Positives = 190/241 (78%), Gaps = 3/241 (1%) Query: 4 SDTPTPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREA 63 +DTP + PRR+P++L+Q +V ++T I G++ PGDKLPTESEIM+ GVSRTVVREA Sbjct: 5 ADTP---VTPRRRPRNLAQGLVESITERIRGGNIRPGDKLPTESEIMRQFGVSRTVVREA 61 Query: 64 ISRLQAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLA 123 +SRLQA+GLVET HG+GT+ LE GG+ +DPA I T+RD+L LLELRI LE+E AGLA Sbjct: 62 LSRLQASGLVETHHGVGTYALEPSGGGDFRVDPADIATVRDVLVLLELRICLESEAAGLA 121 Query: 124 AARRTDEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGV 183 AARR+ QL E+R ALD F++ GGGDTV PDF+FH IA AT NRYF +++SHLG + Sbjct: 122 AARRSPAQLLEMRRALDAFKSALDGGGDTVTPDFQFHLLIAQATDNRYFADLMSHLGSAI 181 Query: 184 IPRKRINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRA 243 IPR RIN+A+ AH+ +A+YL RV EHEDIY AI R DAEAARAAMR HL+NSRERLRRA Sbjct: 182 IPRTRINSAKFAHEDRAAYLARVNLEHEDIYGAIQRQDAEAARAAMRTHLSNSRERLRRA 241 Query: 244 Q 244 Q Sbjct: 242 Q 242 >Q0EE51.1 Q0EE51_PSESF Transcriptional regulator of GntR family Length = 249 Score = 308 bits (789), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 155/241 (64%), Positives = 185/241 (76%) Query: 12 RPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRLQAAG 71 R RRK +SL+QE+V L+ I +G L GDKLPTES IM+ QGVSRTVVREAISRLQA+G Sbjct: 9 RARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAISRLQASG 68 Query: 72 LVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARRTDEQ 131 LVETRHGIGTFVL+ IDPATI T+RD+LA+LELRISLE E+AGLAA RR+DEQ Sbjct: 69 LVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAAQRRSDEQ 128 Query: 132 LQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRKRINT 191 L +R ALD + D V DF+FH IA +TGNRYF +I++HLG +IPR R+N+ Sbjct: 129 LAAMRAALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSIIPRTRLNS 188 Query: 192 AELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQEAESGS 251 A LAHD Q Y+DR+ REHE+I+EAIAR D++AARAAMR HLTNSRERLR A +EAES Sbjct: 189 ARLAHDDQQHYMDRLSREHEEIFEAIARQDSDAARAAMRLHLTNSRERLRHAHEEAESQR 248 Query: 252 A 252 A Sbjct: 249 A 249 >D7I3T0.1 D7I3T0_PSESS Predicted D-glucarate or D-galactorate regulator, GntR family Length = 249 Score = 307 bits (787), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 154/241 (63%), Positives = 185/241 (76%) Query: 12 RPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRLQAAG 71 R RRK +SL+QE+V L+ I +G L GDKLPTES IM+ QGVSRTVVREAISRLQA+G Sbjct: 9 RARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAISRLQASG 68 Query: 72 LVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARRTDEQ 131 LVETRHGIGTFVL+ IDPATI T+RD+LA+LELRISLE E+AGLAA RR+DEQ Sbjct: 69 LVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAAQRRSDEQ 128 Query: 132 LQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRKRINT 191 L +R ALD + D V DF+FH IA +TGNRYF +I++HLG +IPR R+N+ Sbjct: 129 LAAMRSALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSIIPRTRLNS 188 Query: 192 AELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQEAESGS 251 A LAHD Q Y+DR+ REHE+I++AIAR D++AARAAMR HLTNSRERLR A +EAES Sbjct: 189 ARLAHDDQQHYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAHEEAESQR 248 Query: 252 A 252 A Sbjct: 249 A 249 >Q87WJ6.1 Q87WJ6_PSESM Transcriptional regulator, GntR family Length = 249 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 154/241 (63%), Positives = 185/241 (76%) Query: 12 RPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRLQAAG 71 R RRK +SL+QE+V L+ I +G L GDKLPTES IM+ QGVSRTVVREAISRLQA+G Sbjct: 9 RARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAISRLQASG 68 Query: 72 LVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARRTDEQ 131 LVETRHGIGTFVL+ IDPATI T+RD+LA+LELRISLE E+AGLAA RR+DEQ Sbjct: 69 LVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAAQRRSDEQ 128 Query: 132 LQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRKRINT 191 L +R ALD + D V DF+FH IA +TGNRYF +I++HLG +IPR R+N+ Sbjct: 129 LAAMRAALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSIIPRTRLNS 188 Query: 192 AELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQEAESGS 251 A LAHD Q Y+DR+ REHE+I++AIAR D++AARAAMR HLTNSRERLR A +EAES Sbjct: 189 ARLAHDDQQHYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAHEEAESQR 248 Query: 252 A 252 A Sbjct: 249 A 249 >Q48E19.1 Q48E19_PSE14 Transcriptional regulator, GntR family Length = 249 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 153/238 (64%), Positives = 184/238 (77%) Query: 12 RPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRLQAAG 71 R RRK +SL+QE+V L+ I +G L GDKLPTES IM+ QGVSRTVVREAISRLQA+G Sbjct: 9 RARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAISRLQASG 68 Query: 72 LVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARRTDEQ 131 LVETRHGIGTFVL+ IDPATI T+RD+LA+LELRISLE E+AGLAA RR+DEQ Sbjct: 69 LVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAAQRRSDEQ 128 Query: 132 LQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRKRINT 191 L +R ALD + D V DF+FH IA +TGNRYF +I++HLG +IPR R+N+ Sbjct: 129 LAAMRSALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSIIPRTRLNS 188 Query: 192 AELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQEAES 249 A LAHD Q Y+DR+ REHE+I++AIAR D++AARAAMR HLTNSRERLR A +EAES Sbjct: 189 ARLAHDDQQHYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAHEEAES 246 >E2M7E4.1 E2M7E4_PSESM Transcriptional regulator, GntR family Length = 249 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 154/241 (63%), Positives = 185/241 (76%) Query: 12 RPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRLQAAG 71 R RRK +SL+QE+V L+ I +G L GDKLPTES IM+ QGVSRTVVREAISRLQA+G Sbjct: 9 RARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAISRLQASG 68 Query: 72 LVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARRTDEQ 131 LVETRHGIGTFVL+ IDPATI T+RD+LA+LELRISLE E+AGLAA RR+DEQ Sbjct: 69 LVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAAQRRSDEQ 128 Query: 132 LQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRKRINT 191 L +R ALD + D V DF+FH IA +TGNRYF +I++HLG +IPR R+N+ Sbjct: 129 LAAMRAALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSIIPRTRLNS 188 Query: 192 AELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQEAESGS 251 A LAHD Q Y+DR+ REHE+I++AIAR D++AARAAMR HLTNSRERLR A +EAES Sbjct: 189 ARLAHDDQQHYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAHEEAESQR 248 Query: 252 A 252 A Sbjct: 249 A 249 >D4XJ90.1 D4XJ90_9BURK GntR family transcriptional regulator Length = 285 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 147/237 (62%), Positives = 189/237 (79%), Gaps = 1/237 (0%) Query: 8 TPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRL 67 TP+L P+R+P++L+Q +V +++ I +G + PGDKLPTESEIM+ GVSRTVVREA+SRL Sbjct: 50 TPVL-PQRRPRNLAQGLVESISERIRSGEIRPGDKLPTESEIMRQFGVSRTVVREALSRL 108 Query: 68 QAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARR 127 QA+GLVET HG+GT+ LE + +DPA I T+RD+L LLELRI LE+E AGLAA RR Sbjct: 109 QASGLVETHHGVGTYALEPSGSVDFRVDPADIATVRDVLVLLELRICLESEAAGLAAIRR 168 Query: 128 TDEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRK 187 ++ QLQE+R ALDLF++ + GGDT+ PDF+FH +A +T NRYF +++SHLG +IPR Sbjct: 169 SEVQLQEMRRALDLFKSALESGGDTITPDFQFHLLVAQSTNNRYFADLMSHLGSAIIPRT 228 Query: 188 RINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQ 244 RIN+A+ AH+ +A+YL RV EHEDIY AI R DAEAARAAMR HL+NSRERLRRAQ Sbjct: 229 RINSAKFAHEDRAAYLARVNLEHEDIYSAIMRQDAEAARAAMRTHLSNSRERLRRAQ 285 >Q4ZNL4.1 Q4ZNL4_PSEU2 Regulatory protein, GntR:Bacterial regulatory protein, GntR Length = 249 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 154/245 (62%), Positives = 187/245 (76%) Query: 8 TPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISRL 67 + L R RRK +SL+QE+V L+ I +G L GDKLPTES IM+ QGVSRTVVREAISRL Sbjct: 5 SALPRARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAISRL 64 Query: 68 QAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAARR 127 QA+GLVETRHGIGTFVL+ IDPATI T+RD+LA+LELRISLE E+AGLAA RR Sbjct: 65 QASGLVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAAQRR 124 Query: 128 TDEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPRK 187 +DEQL +R ALD + D V DF+FH IA +TGNRYF +I++HLG +IPR Sbjct: 125 SDEQLAAMRSALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSIIPRT 184 Query: 188 RINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQEA 247 R+N+A LAHD Q Y++R+ REHE+I++AIAR D++AARAAMR HLTNSRERLR A +EA Sbjct: 185 RLNSARLAHDDQQHYMNRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAHEEA 244 Query: 248 ESGSA 252 ES A Sbjct: 245 ESQRA 249 >Q39I43.1 Q39I43_BURS3 Transcriptional regulator, GntR family Length = 253 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/243 (62%), Positives = 184/243 (75%) Query: 7 PTPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVVREAISR 66 PT PRR+ +SL+Q+VV ALTA I NG+L PGDKLPTE+E+M QGVSRTVVREAISR Sbjct: 4 PTLPAAPRRRARSLAQDVVDALTAQIENGTLRPGDKLPTETEVMAAQGVSRTVVREAISR 63 Query: 67 LQAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETAGLAAAR 126 +QA+GLVETRHGIG+FVLE + + IDPATITT+RD+LA+LELRISLE+E A LAA R Sbjct: 64 MQASGLVETRHGIGSFVLELSRRQTLGIDPATITTLRDVLAVLELRISLESECASLAAQR 123 Query: 127 RTDEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLGMGVIPR 186 D L +R ALD + GG DT DF+FH IA +TGNRYF++I++ LG +IPR Sbjct: 124 ANDTDLAALRRALDAIASGAGGGRDTAQLDFQFHLQIAQSTGNRYFVDIMTQLGTSIIPR 183 Query: 187 KRINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERLRRAQQE 246 R+N+A A D Y+ R+ EHEDIYEAIAR D EAARAAMR HLTNSRERLRRA + Sbjct: 184 TRVNSARFAGDDLERYVGRLNHEHEDIYEAIARHDPEAARAAMRTHLTNSRERLRRAHEA 243 Query: 247 AES 249 AE+ Sbjct: 244 AEA 246