BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0091.p (164 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J160.1 D8J160_HERSS Transcription regulator protein 340 4e-92 A4G787.1 A4G787_HERAR Iron-sulfur cluster assembly transcription... 265 2e-69 A6SXE4.1 A6SXE4_JANMA Iron-sulfur cluster assembly transcription... 265 2e-69 B2U8T9.1 B2U8T9_RALPJ Transcriptional regulator, BadM/Rrf2 family 249 9e-65 C6BFI5.1 C6BFI5_RALP1 Transcriptional regulator, BadM/Rrf2 family 249 9e-65 E2SZE0.1 E2SZE0_9RALS Iron-sulfur cluster assembly transcription... 249 9e-65 B5SMJ1.1 B5SMJ1_RALSO Putative uncharacterized protein 248 2e-64 B5S6G4.1 B5S6G4_RALSO Putative uncharacterized protein 248 2e-64 Q8Y0M5.1 Q8Y0M5_RALSO Putative uncharacterized protein 247 5e-64 E5ASB2.1 E5ASB2_BURRH Rrf2 family protein 246 7e-64 >D8J160.1 D8J160_HERSS Transcription regulator protein Length = 164 Score = 340 bits (872), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE Sbjct: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA 164 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA Sbjct: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA 164 >A4G787.1 A4G787_HERAR Iron-sulfur cluster assembly transcription factor IscR Length = 157 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/163 (79%), Positives = 139/163 (85%), Gaps = 7/163 (4%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ GPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLAR+A DV+VADIIIAVDEPLDATQCGGKENCHS H G RCMTHDLW+TLN Sbjct: 61 PGGGYNLARRAEDVTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNA 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAA 163 KMV+YLDSVSL+DLVDQQK+ Q VVV+HR AA Sbjct: 121 KMVDYLDSVSLKDLVDQQKQK-------VSEQCVVVVHRNHAA 156 >A6SXE4.1 A6SXE4_JANMA Iron-sulfur cluster assembly transcription factor Length = 157 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/163 (80%), Positives = 142/163 (87%), Gaps = 7/163 (4%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ GPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLAR+A DV+VADIIIAVDEPLDATQCGGKENCHS H G RCMTHDLW+TLN Sbjct: 61 PGGGYNLARRAEDVTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNA 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAA 163 KMV+YLDSVSL+DLVDQQK+ K +E Q VVV+HR AA Sbjct: 121 KMVDYLDSVSLKDLVDQQKQ-KISE------QCVVVVHRNHAA 156 >B2U8T9.1 B2U8T9_RALPJ Transcriptional regulator, BadM/Rrf2 family Length = 197 Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 119/145 (82%), Positives = 132/145 (91%), Gaps = 2/145 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGG--ARCMTHDLWSTL 118 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H GG RCMTHDLW+TL Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL 120 Query: 119 NEKMVEYLDSVSLQDLVDQQKEPKP 143 N+KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 121 NQKMVEYLDSVSLQNLVDQQRERQP 145 >C6BFI5.1 C6BFI5_RALP1 Transcriptional regulator, BadM/Rrf2 family Length = 197 Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 119/145 (82%), Positives = 132/145 (91%), Gaps = 2/145 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGG--ARCMTHDLWSTL 118 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H GG RCMTHDLW+TL Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL 120 Query: 119 NEKMVEYLDSVSLQDLVDQQKEPKP 143 N+KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 121 NQKMVEYLDSVSLQNLVDQQRERQP 145 >E2SZE0.1 E2SZE0_9RALS Iron-sulfur cluster assembly transcription factor IscR Length = 197 Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 119/145 (82%), Positives = 132/145 (91%), Gaps = 2/145 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGG--ARCMTHDLWSTL 118 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H GG RCMTHDLW+TL Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL 120 Query: 119 NEKMVEYLDSVSLQDLVDQQKEPKP 143 N+KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 121 NQKMVEYLDSVSLQNLVDQQRERQP 145 >B5SMJ1.1 B5SMJ1_RALSO Putative uncharacterized protein Length = 193 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 118 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQDLVDQQ+E +P Sbjct: 119 KMVEYLDSVSLQDLVDQQRERQP 141 >B5S6G4.1 B5S6G4_RALSO Putative uncharacterized protein Length = 193 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 118 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQDLVDQQ+E +P Sbjct: 119 KMVEYLDSVSLQDLVDQQRERQP 141 >Q8Y0M5.1 Q8Y0M5_RALSO Putative uncharacterized protein Length = 193 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 118/143 (82%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 118 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 119 KMVEYLDSVSLQNLVDQQRERQP 141 >E5ASB2.1 E5ASB2_BURRH Rrf2 family protein Length = 180 Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 118/139 (84%), Positives = 128/139 (92%), Gaps = 1/139 (0%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ KGPVTL+AIS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 5 MRLTTKGRFAVTAMIDLALRQEKGPVTLAAISQRQQISLSYLEQLFGKLRRHEIVESVRG 64 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLAR+A +V+VADIIIAVDEPLDATQCGGK C PGG CMTH+LWSTLN+ Sbjct: 65 PGGGYNLARRADEVTVADIIIAVDEPLDATQCGGKGTCEGTKQPGG-HCMTHELWSTLNQ 123 Query: 121 KMVEYLDSVSLQDLVDQQK 139 KMVEYLDSVSLQDLVDQQ+ Sbjct: 124 KMVEYLDSVSLQDLVDQQR 142