BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0073.p (500 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J140.1 D8J140_HERSS Nitrogen assimilation transcription activa... 1002 0.0 O86057.2 O86057_HERSE Transcriptional activator NtrC 943 0.0 A4G3P7.2 A4G3P7_HERAR Nitrogen regulation protein NR(I) 829 0.0 F1VW29.1 F1VW29_9BURK Nitrogen regulation protein NR(I) 815 0.0 A6SWX4.1 A6SWX4_JANMA Nitrogen regulation protein NR(I) 799 0.0 Q46ZL5.1 Q46ZL5_CUPPJ Helix-turn-helix, Fis-type:Nitrogen regula... 729 0.0 B3R1H0.1 B3R1H0_CUPTR Nitrogen regulation protein NR(I) 721 0.0 D8NJY7.1 D8NJY7_RALSO Nitrogen regulation protein NR(I) 718 0.0 D8N474.1 D8N474_RALSO Nitrogen regulation protein NR(I) 717 0.0 Q8XZY4.1 Q8XZY4_RALSO Probable nitrogen assimilation regulatory ... 715 0.0 >D8J140.1 D8J140_HERSS Nitrogen assimilation transcription activator protein Length = 500 Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/500 (99%), Positives = 497/500 (99%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG Sbjct: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES Sbjct: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH Sbjct: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM Sbjct: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI Sbjct: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC Sbjct: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPASAAALPMAYAEAAPGVASASA 420 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPASAAALP AY E APGVASASA Sbjct: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPASAAALPTAYTEPAPGVASASA 420 Query: 421 DGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAVRLGI 480 DGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAVRLGI Sbjct: 421 DGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAVRLGI 480 Query: 481 GRNTITRKIQELGIGGAEDD 500 GRNTITRKIQELGIGGAEDD Sbjct: 481 GRNTITRKIQELGIGGAEDD 500 >O86057.2 O86057_HERSE Transcriptional activator NtrC Length = 500 Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/500 (96%), Positives = 483/500 (96%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG Sbjct: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES Sbjct: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH Sbjct: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM Sbjct: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI Sbjct: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC Sbjct: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPASAAALPMAYAEAAPGVASASA 420 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQ + A PGVASASA Sbjct: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQNRGCSGIGGSPSDGLYRACPGVASASA 420 Query: 421 DGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAVRLGI 480 DGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAVRLGI Sbjct: 421 DGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAVRLGI 480 Query: 481 GRNTITRKIQELGIGGAEDD 500 GRNTITRKIQ+LGIGGAEDD Sbjct: 481 GRNTITRKIQKLGIGGAEDD 500 >A4G3P7.2 A4G3P7_HERAR Nitrogen regulation protein NR(I) Length = 510 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/510 (81%), Positives = 445/510 (87%), Gaps = 10/510 (1%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDDESIRWVLEKALARENLATQSFS+ARDA+ AL+ G PQVLVSDIRMPG +G Sbjct: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSNARDAMEALKTGAPQVLVSDIRMPGETG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 LELLQ VKAKHPG+PVIIITAFSDLDSAV+AFQGGAFEYLAKPFD+DKAVELIRRAL+ES Sbjct: 61 LELLQAVKAKHPGLPVIIITAFSDLDSAVAAFQGGAFEYLAKPFDIDKAVELIRRALEES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRET IEQ +A+TPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH Sbjct: 121 LRETSIEQVSAETPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRASQPF+ALNTAAIPKDLLESELFGHERGAFTGAQA RRGRFEQA+GGTLFLDEIGDM Sbjct: 181 SPRASQPFIALNTAAIPKDLLESELFGHERGAFTGAQASRRGRFEQADGGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDGHFYRVGGHQ LKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI Sbjct: 241 PFDLQTRLLRVLSDGHFYRVGGHQPLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLPSLRER EDIPIL R+FLAQSA+QLGVE KR+S AMQFL+ LE PGNVRQLENLC Sbjct: 301 RLRLPSLRERREDIPILTRHFLAQSAKQLGVEVKRMSDGAMQFLTNLELPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVE-ERVHAPQPAQTVAAPASAAALPMAYAEAAPGVASAS 419 NWITVMAPGQTVE KDLP +L E + A A A + P + A G+ S Sbjct: 361 NWITVMAPGQTVEAKDLPHELTEGQAFSASGQAGANAVHGISYTTPESDAMTLGGMTQTS 420 Query: 420 ----ADGAAGA-----SWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGR 470 A GAA A SWI LLE EAA +LA+ +PEVMD LGRQFE+ LIK+ALKHTHGR Sbjct: 421 SFPNAGGAASAPLESSSWIALLEMEAASLLAAGKPEVMDALGRQFESTLIKMALKHTHGR 480 Query: 471 KNDAAVRLGIGRNTITRKIQELGIGGAEDD 500 KNDAAVRLGIGRNTITRKI ELGI GA+DD Sbjct: 481 KNDAAVRLGIGRNTITRKIHELGIDGAKDD 510 >F1VW29.1 F1VW29_9BURK Nitrogen regulation protein NR(I) Length = 499 Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/504 (80%), Positives = 444/504 (88%), Gaps = 9/504 (1%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDDESIRWVLEKALARENLAT+SFS+ARDA ALQ+ TPQVLVSDIRMPG SG Sbjct: 1 MKPIWIVDDDESIRWVLEKALARENLATRSFSNARDANDALQHDTPQVLVSDIRMPGGSG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 LELLQTVK K+PG+PVIIITAFSDLDSAV+AFQGGAFEYLAKPFD++KAVELIRRALDES Sbjct: 61 LELLQTVKTKYPGLPVIIITAFSDLDSAVAAFQGGAFEYLAKPFDLEKAVELIRRALDES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRE +EQ A+TPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESG+GKELVARALHKH Sbjct: 121 LREASVEQAPAETPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGTGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRA+QPF+ALNTAAIPKDLLESELFGHERGAFTGAQA RRGRFEQAE GTLFLDEIGDM Sbjct: 181 SPRAAQPFIALNTAAIPKDLLESELFGHERGAFTGAQASRRGRFEQAENGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDGHFYRVGGHQ +KANVRVIAATHQNLEQRVREGLFREDLYHRLNVI Sbjct: 241 PFDLQTRLLRVLSDGHFYRVGGHQPMKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLPSLRER EDIPIL RYFL QSA+QLG +AKR++ AMQFL+ L+ PGNVRQLENLC Sbjct: 301 RLRLPSLRERREDIPILTRYFLTQSAKQLGGDAKRMTDGAMQFLTGLDLPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPASAAALPMAYAEAAPGVASASA 420 NWITVMAPGQ+VE+KDLP+DL++ A +A P ++ P + E A V A++ Sbjct: 361 NWITVMAPGQSVEVKDLPRDLIDGGSFA-----AIATPQASVMTPASMPEGAGVVTQATS 415 Query: 421 DGAAGA----SWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKNDAAV 476 A A +W+ LLE EAA+MLA+ QP+VM LGR FE+ALIK ALKHTHGRKNDAA+ Sbjct: 416 APVAEAVDPETWVDLLEAEAARMLAAGQPDVMGTLGRLFESALIKTALKHTHGRKNDAAI 475 Query: 477 RLGIGRNTITRKIQELGIGGAEDD 500 RLGIGRNTITRKIQELGI GA+D+ Sbjct: 476 RLGIGRNTITRKIQELGIDGAKDE 499 >A6SWX4.1 A6SWX4_JANMA Nitrogen regulation protein NR(I) Length = 506 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/515 (80%), Positives = 443/515 (86%), Gaps = 24/515 (4%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDDESIRWVLEKALARENLAT+SFS+ARDA+ AL+ G PQVLVSDIRMPG SG Sbjct: 1 MKPIWIVDDDESIRWVLEKALARENLATKSFSNARDALEALKTGAPQVLVSDIRMPGESG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 LELLQ VKAKHPG+PVIIITAFSDLDSAV+AFQGGAFEYLAKPFD+D AV LIRRAL+ES Sbjct: 61 LELLQAVKAKHPGLPVIIITAFSDLDSAVAAFQGGAFEYLAKPFDIDHAVGLIRRALEES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRET +EQ +A+TPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH Sbjct: 121 LRETSVEQVSAETPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRASQPF+ALNTAAIPKDLLESELFGHERGAFTGAQA RRGRFEQAE GTLFLDEIGDM Sbjct: 181 SPRASQPFIALNTAAIPKDLLESELFGHERGAFTGAQATRRGRFEQAENGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDGHFYRVGGHQ LKANVRVIAATHQNLE RVREGLFREDLYHRLNVI Sbjct: 241 PFDLQTRLLRVLSDGHFYRVGGHQPLKANVRVIAATHQNLEHRVREGLFREDLYHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLPSLRER EDIPIL R+FL QSA+QLGVE KR+S AMQFLS LE PGNVRQLENLC Sbjct: 301 RLRLPSLRERREDIPILTRHFLQQSAKQLGVEVKRMSDSAMQFLSSLELPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPASAA---ALPMAYAEAAPGVAS 417 NWITVMAPGQTVE KDLP +L E Q AA AS + + P A++ A A Sbjct: 361 NWITVMAPGQTVEAKDLPHELTE--------GQAFAASASGSFPGSQPAAHSYATTDEA- 411 Query: 418 ASADG------------AAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALK 465 AS +G A +WITLLETEAA +LA+ QPEVMD LGRQFE+ LIK ALK Sbjct: 412 ASPNGAPPSMAFAAPAPAEPGNWITLLETEAAALLAAGQPEVMDALGRQFESTLIKTALK 471 Query: 466 HTHGRKNDAAVRLGIGRNTITRKIQELGIGGAEDD 500 HTHGRKNDAAVRLGIGRNTITRKI ELGI GA+DD Sbjct: 472 HTHGRKNDAAVRLGIGRNTITRKIHELGIDGAKDD 506 >Q46ZL5.1 Q46ZL5_CUPPJ Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) Length = 524 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/514 (71%), Positives = 422/514 (82%), Gaps = 20/514 (3%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDD+SIRWVLEKALARE+L ++SF++ RDA+AAL++ PQVL+SDIRMPG SG Sbjct: 10 MKPIWIVDDDQSIRWVLEKALARESLLSRSFTNVRDALAALEDDVPQVLISDIRMPGGSG 69 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 L+LLQ +KAKHPG+PVII+TA+SDLDSAV+AFQGGAFEYLAKPFDVDKAVELIRRAL+ES Sbjct: 70 LDLLQAIKAKHPGLPVIIMTAYSDLDSAVAAFQGGAFEYLAKPFDVDKAVELIRRALEES 129 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRE +++ PEILGQAPAMQDVFRAIGRLSQSNVTV+ITGESG+GKELVARALHKH Sbjct: 130 LREEEMDDRLVDAPEILGQAPAMQDVFRAIGRLSQSNVTVMITGESGTGKELVARALHKH 189 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRA+ PF+ALNTAAIPKDLLESELFGHERGAFTGAQ MRRGRFEQAEGGTLFLDEIGDM Sbjct: 190 SPRANGPFIALNTAAIPKDLLESELFGHERGAFTGAQTMRRGRFEQAEGGTLFLDEIGDM 249 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDG+FYRVGGH L+ANVRVIAATHQNLE RV+EGLFREDL+HRLNVI Sbjct: 250 PFDLQTRLLRVLSDGNFYRVGGHNPLRANVRVIAATHQNLELRVKEGLFREDLFHRLNVI 309 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLP LRER EDI +LAR+FL +SA++LGVE KR+S +A+ ++S L FPGNVRQLENLC Sbjct: 310 RLRLPPLRERPEDITLLARHFLQKSAKELGVEPKRMSDEALAYVSTLPFPGNVRQLENLC 369 Query: 361 NWITVMAPGQTVEIKDLPQDLV--EERVHAPQPAQTVAAPASA-------------AALP 405 NW+TVMAP QT+E+KDLP++++ AP P A SA A+P Sbjct: 370 NWLTVMAPAQTIEVKDLPREMIGTGSAESAPVPRAVEARLPSADFEGGHDLSDYGGLAMP 429 Query: 406 MAYAEAAPGV-----ASASADGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALI 460 +A A+ V S A + A W TLL EA ML S QPEVMD+L R+FE A++ Sbjct: 430 VAEADTMTAVRPVTATSMPAPSSLAAGWETLLAGEAKAMLESGQPEVMDVLTRRFEKAVL 489 Query: 461 KVALKHTHGRKNDAAVRLGIGRNTITRKIQELGI 494 + AL T GR+ +AA RLGIGRNTITRK+QELG Sbjct: 490 EAALGVTRGRRVEAATRLGIGRNTITRKLQELGF 523 >B3R1H0.1 B3R1H0_CUPTR Nitrogen regulation protein NR(I) Length = 528 Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/519 (70%), Positives = 427/519 (82%), Gaps = 26/519 (5%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDD+SIRWVLEKALARE+L ++SF++ RDA+AAL+ PQVL+SDIRMPG SG Sbjct: 10 MKPIWIVDDDQSIRWVLEKALARESLLSRSFTNVRDALAALEEDQPQVLISDIRMPGGSG 69 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 L+LLQ +KA+HPG+PVI++TA+SDLDSAV+AFQGGAFEYLAKPFDVDKAVELIRRAL+ES Sbjct: 70 LDLLQAIKARHPGLPVIVMTAYSDLDSAVAAFQGGAFEYLAKPFDVDKAVELIRRALEES 129 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRE +++ PEILGQAPAMQDVFRAIGRLSQSNVTV+ITGESG+GKELVARALHKH Sbjct: 130 LREEEMDDRLVDAPEILGQAPAMQDVFRAIGRLSQSNVTVMITGESGTGKELVARALHKH 189 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRA+ PF+ALNTAAIPKDLLESELFGHERGAFTGAQ MRRGRFEQAEGGTLFLDEIGDM Sbjct: 190 SPRANGPFIALNTAAIPKDLLESELFGHERGAFTGAQTMRRGRFEQAEGGTLFLDEIGDM 249 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDG+FYRVGGH L+ANVRVIAATHQNLE RV+EGLFREDL+HRLNVI Sbjct: 250 PFDLQTRLLRVLSDGNFYRVGGHNPLRANVRVIAATHQNLELRVKEGLFREDLFHRLNVI 309 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLP LRER EDI +LAR+FL +SA++LGVE KR+S +A+ ++S L FPGNVRQLENLC Sbjct: 310 RLRLPPLRERPEDITLLARHFLQKSAKELGVEPKRMSDEALAYVSTLPFPGNVRQLENLC 369 Query: 361 NWITVMAPGQTVEIKDLPQDLVE----ERVHAPQP-------------AQTVAAPASAAA 403 NW+TVMAP QT+E+KDLP++++E E V+AP+P AQ + A A Sbjct: 370 NWLTVMAPAQTIEVKDLPREMLEAGTSEPVNAPRPERAPDLRAAEYDGAQDL-ADYGGFA 428 Query: 404 LPMAYAEA--------APGVASASADGAAGASWITLLETEAAQMLASEQPEVMDILGRQF 455 +P+A A+ A V A A A W +LL EA ML + QPEVMD+L R+F Sbjct: 429 VPVAEADTATAVRAAPAASVVQVPAPAPAAAGWESLLAGEARAMLEAGQPEVMDLLTRRF 488 Query: 456 EAALIKVALKHTHGRKNDAAVRLGIGRNTITRKIQELGI 494 E A+++ AL T GR+ +AA RLGIGRNTITRK+QELG Sbjct: 489 EKAVLEAALGVTRGRRVEAATRLGIGRNTITRKLQELGF 527 >D8NJY7.1 D8NJY7_RALSO Nitrogen regulation protein NR(I) Length = 502 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/507 (71%), Positives = 415/507 (81%), Gaps = 19/507 (3%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDD+SIRWVLEKALARE+L ++SF++ARDA+ AL TPQVL+SD+RMPG SG Sbjct: 1 MKPIWIVDDDQSIRWVLEKALARESLLSRSFTNARDALNALDEETPQVLISDVRMPGGSG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 L+LLQ +K++HPG+PVII+TA+SDLDSAV+AFQGGAFEYLAKPFDVD+AVELIRRAL+ES Sbjct: 61 LDLLQAIKSRHPGLPVIIMTAYSDLDSAVAAFQGGAFEYLAKPFDVDRAVELIRRALEES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRE +I+ PEILGQAPAMQDVFRAIGRLSQSNVTVLITGESG+GKELVARALHKH Sbjct: 121 LREEEIDDRLGDAPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGTGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRAS PF+ALNTAAIPKDLLESELFGHERGAFTGAQ MRRGRFEQAEGGTLFLDEIGDM Sbjct: 181 SPRASGPFIALNTAAIPKDLLESELFGHERGAFTGAQTMRRGRFEQAEGGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDGHFYRVGGH LKANVRVIAATHQNLE RV++GLFREDL+HRLNVI Sbjct: 241 PFDLQTRLLRVLSDGHFYRVGGHNPLKANVRVIAATHQNLETRVKDGLFREDLFHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLP+LRER EDI +LAR+FL +SA++LGVE KR+S +A+ ++ L FPGNVRQLENLC Sbjct: 301 RLRLPALRERPEDITLLARHFLQKSAKELGVEPKRMSDEALAHIATLPFPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHAPQPAQTVAAPAS-AAALPMAYAEAAPGVASAS 419 NW+TVMAP QT+E+KDLP DLV +Q + A AA P E + G A Sbjct: 361 NWLTVMAPAQTIEVKDLPHDLVR------GTSQMLPVTAELAAGRPAVVGEPSHGGGEAY 414 Query: 420 ADGA------------AGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHT 467 A GA A A W L EA ML + QP+VMD L R+FE A+++ AL T Sbjct: 415 AVGAEVPVAASAAGASATAGWERTLAGEAKAMLEAGQPDVMDALTRRFERAILEAALGVT 474 Query: 468 HGRKNDAAVRLGIGRNTITRKIQELGI 494 GR+ +AA RLGIGRNTITRK+QELG Sbjct: 475 RGRRVEAATRLGIGRNTITRKLQELGF 501 >D8N474.1 D8N474_RALSO Nitrogen regulation protein NR(I) Length = 502 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/501 (72%), Positives = 419/501 (83%), Gaps = 7/501 (1%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDD+SIRWVLEKALARE+L ++SF++ARDA+ AL+ TPQVL+SD+RMPG SG Sbjct: 1 MKPIWIVDDDQSIRWVLEKALARESLLSRSFTNARDALNALEEETPQVLISDVRMPGGSG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 L+LLQT++ +HPG+PVII+TA+SDLDSAV+AFQGGAFEYLAKPFDVD+AVELIRRAL+ES Sbjct: 61 LDLLQTIRGRHPGLPVIIMTAYSDLDSAVAAFQGGAFEYLAKPFDVDRAVELIRRALEES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRE +I+ PEILGQAPAMQDVFRAIGRLSQSNVTVLITGESG+GKELVARALHKH Sbjct: 121 LREEEIDDRLGDAPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGTGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRAS PF+ALNTAAIPKDLLESELFGHERGAFTGAQ MRRGRFEQAEGGTLFLDEIGDM Sbjct: 181 SPRASGPFIALNTAAIPKDLLESELFGHERGAFTGAQTMRRGRFEQAEGGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDGHFYRVGGH LKANVRVIAATHQNLE RV++GLFREDL+HRLNVI Sbjct: 241 PFDLQTRLLRVLSDGHFYRVGGHNPLKANVRVIAATHQNLETRVKDGLFREDLFHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLP+LRER EDI +LAR+FL +SA++LGVE KR+S +A+ ++ L FPGNVRQLENLC Sbjct: 301 RLRLPALRERPEDITLLARHFLQKSAKELGVEPKRMSDEALSHIATLPFPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHA-PQPAQTVAAPASAAALP------MAYAEAAP 413 NW+TVMAP QT+EIKDLP DLV P A+ +AA + A P A AP Sbjct: 361 NWLTVMAPAQTIEIKDLPHDLVRGTSQMLPGTAELMAAGRAVAGEPPFGADARAAGAEAP 420 Query: 414 GVASASADGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKND 473 A A+A +A + W L EA ML + QP+VMD L R+FE A+++ AL T GR+ + Sbjct: 421 VAAGAAAGASAVSGWERTLAGEARAMLEAGQPDVMDALTRRFERAILEAALGVTRGRRVE 480 Query: 474 AAVRLGIGRNTITRKIQELGI 494 AA RLGIGRNTITRK+QELG Sbjct: 481 AATRLGIGRNTITRKLQELGF 501 >Q8XZY4.1 Q8XZY4_RALSO Probable nitrogen assimilation regulatory response regulator transcription regulator protein Length = 502 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/501 (72%), Positives = 417/501 (83%), Gaps = 7/501 (1%) Query: 1 MKPIWIVDDDESIRWVLEKALARENLATQSFSSARDAIAALQNGTPQVLVSDIRMPGASG 60 MKPIWIVDDD+SIRWVLEKALARE+L ++SF++ARDA+ AL+ TPQVL+SD+RMPG SG Sbjct: 1 MKPIWIVDDDQSIRWVLEKALARESLLSRSFTNARDALNALEEETPQVLISDVRMPGGSG 60 Query: 61 LELLQTVKAKHPGIPVIIITAFSDLDSAVSAFQGGAFEYLAKPFDVDKAVELIRRALDES 120 L+LLQ +K +HPG+PVII+TA+SDLDSAV+AFQGGAFEYLAKPFDVD+AVELIRRAL+ES Sbjct: 61 LDLLQAIKGRHPGLPVIIMTAYSDLDSAVAAFQGGAFEYLAKPFDVDRAVELIRRALEES 120 Query: 121 LRETDIEQGAAQTPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVARALHKH 180 LRE +I+ PEILGQAPAMQDVFRAIGRLSQSNVTVLITGESG+GKELVARALHKH Sbjct: 121 LREEEIDDRLGDAPEILGQAPAMQDVFRAIGRLSQSNVTVLITGESGTGKELVARALHKH 180 Query: 181 SPRASQPFVALNTAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAEGGTLFLDEIGDM 240 SPRAS PF+ALNTAAIPKDLLESELFGHERGAFTGAQ MRRGRFEQAEGGTLFLDEIGDM Sbjct: 181 SPRASGPFIALNTAAIPKDLLESELFGHERGAFTGAQTMRRGRFEQAEGGTLFLDEIGDM 240 Query: 241 PLDLQTRLLRVLSDGHFYRVGGHQSLKANVRVIAATHQNLEQRVREGLFREDLYHRLNVI 300 P DLQTRLLRVLSDGHFYRVGGH LKANVRVIAATHQNLE RV++GLFREDL+HRLNVI Sbjct: 241 PFDLQTRLLRVLSDGHFYRVGGHNPLKANVRVIAATHQNLETRVKDGLFREDLFHRLNVI 300 Query: 301 RLRLPSLRERSEDIPILARYFLAQSARQLGVEAKRLSPQAMQFLSQLEFPGNVRQLENLC 360 RLRLP+LRER EDI +LAR+FL +SA++LGVE KR+S +A+ ++ L FPGNVRQLENLC Sbjct: 301 RLRLPALRERPEDITLLARHFLQKSAKELGVEPKRMSDEALSHIATLPFPGNVRQLENLC 360 Query: 361 NWITVMAPGQTVEIKDLPQDLVEERVHA-PQPAQTVAAPASAAALP------MAYAEAAP 413 NW+TVMAP QT+EIKDLP DLV P A+ + A + A P A AP Sbjct: 361 NWLTVMAPAQTIEIKDLPHDLVRGASQMLPGTAELMVAGRAVAGEPSFGADAHAAGAEAP 420 Query: 414 GVASASADGAAGASWITLLETEAAQMLASEQPEVMDILGRQFEAALIKVALKHTHGRKND 473 A A+A +A + W L EA ML + QP+VMD L R+FE A+++ AL T GR+ + Sbjct: 421 VAAGAAAGASAMSGWERALAGEAKAMLEAGQPDVMDALTRRFERAILEAALGVTRGRRVE 480 Query: 474 AAVRLGIGRNTITRKIQELGI 494 AA RLGIGRNTITRK+QELG Sbjct: 481 AATRLGIGRNTITRKLQELGF 501