BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0011.p (278 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0J6.1 D8J0J6_HERSS GntR family transcription regulator protein 545 e-153 Q4K8G8.1 Q4K8G8_PSEF5 Transcriptional regulator, GntR family 250 2e-64 Q120R2.1 Q120R2_POLSJ Transcriptional regulator, GntR family 211 1e-52 Q46NK8.1 Q46NK8_CUPPJ Transcriptional regulator, GntR family 209 4e-52 Q471Y5.1 Q471Y5_CUPPJ Transcriptional regulator, GntR family 202 5e-50 B3R555.1 B3R555_CUPTR Putative transcriptional regulator, GntR f... 197 1e-48 E8TZW2.1 E8TZW2_ALIDB GntR domain protein 197 2e-48 Q0KBC6.1 Q0KBC6_CUPNH Transcriptional regulator, GntR-family 196 4e-48 Q1LMB3.1 Q1LMB3_RALME Transcriptional regulator, GntR-family 192 4e-47 A4SZD6.1 A4SZD6_POLSQ Transcriptional regulator, GntR family 189 5e-46 >D8J0J6.1 D8J0J6_HERSS GntR family transcription regulator protein Length = 278 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 1 MRAMKTSPSSSAAAQAVPPAPGSARGKVTLADHVTSVLARQIRAGEFAPETRLPSEMELT 60 MRAMKTSPSSSAAAQAVPPAPGSARGKVTLADHVTSVLARQIRAGEFAPETRLPSEMELT Sbjct: 1 MRAMKTSPSSSAAAQAVPPAPGSARGKVTLADHVTSVLARQIRAGEFAPETRLPSEMELT 60 Query: 61 ERFSVSRTVIREAISRLKSEGLVGSRRGSGTVVLPANPATPFRLDLDVDDGRDSIQAVLR 120 ERFSVSRTVIREAISRLKSEGLVGSRRGSGTVVLPANPATPFRLDLDVDDGRDSIQAVLR Sbjct: 61 ERFSVSRTVIREAISRLKSEGLVGSRRGSGTVVLPANPATPFRLDLDVDDGRDSIQAVLR 120 Query: 121 VIELRRGVEGEMAALAAQRRTSAQNLAIQQALQAIDEAAAAGRDGVPEDFAFHAAISNAS 180 VIELRRGVEGEMAALAAQRRTSAQNLAIQQALQAIDEAAAAGRDGVPEDFAFHAAISNAS Sbjct: 121 VIELRRGVEGEMAALAAQRRTSAQNLAIQQALQAIDEAAAAGRDGVPEDFAFHAAISNAS 180 Query: 181 HNPLYTSLVQFLSQFLHAAIRVARMNEARSNEFVQQVRAEHAALAEAISAGDAEAARAAA 240 HNPLYTSLVQFLSQFLHAAIRVARMNEARSNEFVQQVRAEHAALAEAISAGDAEAARAAA Sbjct: 181 HNPLYTSLVQFLSQFLHAAIRVARMNEARSNEFVQQVRAEHAALAEAISAGDAEAARAAA 240 Query: 241 LRHMENSAQRLQAADRAFWASAEGQAAARDLARVRDAG 278 LRHMENSAQRLQAADRAFWASAEGQAAARDLARVRDAG Sbjct: 241 LRHMENSAQRLQAADRAFWASAEGQAAARDLARVRDAG 278 >Q4K8G8.1 Q4K8G8_PSEF5 Transcriptional regulator, GntR family Length = 261 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/247 (57%), Positives = 170/247 (68%), Gaps = 5/247 (2%) Query: 13 AAQAVPPAPGSARGKVTLADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIRE 72 AA ++ SA+G TLAD VT+ L I +GE P RLP+E L ERF VSRTVIRE Sbjct: 12 AADSLATLKDSAKG--TLADQVTAALKAHIASGEVLPGARLPTEPVLCERFGVSRTVIRE 69 Query: 73 AISRLKSEGLVGSRRGSGTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEM 132 AISRLKS GLV R+GSGTVV F +DLDV R SI+AVLRV ELRRG+EGE Sbjct: 70 AISRLKSAGLVEVRQGSGTVVCEGAHIKAFTIDLDV---RGSIEAVLRVTELRRGIEGEA 126 Query: 133 AALAAQRRTSAQNLAIQQALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFL 192 AALAAQR T +Q AI QAL AID A AG+DGV +D AFH +IS A+ NPLY SL +F+ Sbjct: 127 AALAAQRHTPSQLEAIHQALLAIDSAEQAGQDGVEQDLAFHLSISQATGNPLYPSLHEFI 186 Query: 193 SQFLHAAIRVARMNEARSNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRLQ 252 +QF+ AIR+ R NE R + + VRAEH A+ AI+A D E AR AAL H+ N+ +RL+ Sbjct: 187 AQFIKEAIRITRSNEERRKDLARTVRAEHLAVYRAIAARDVEGARQAALSHIHNAVERLK 246 Query: 253 AADRAFW 259 +AD AFW Sbjct: 247 SADPAFW 253 >Q120R2.1 Q120R2_POLSJ Transcriptional regulator, GntR family Length = 274 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 131/253 (51%), Positives = 164/253 (64%), Gaps = 7/253 (2%) Query: 29 TLADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRG 88 TLAD +T VLA Q+R+G + RLP+E + E F VSRTV+RE ISRLKSEGLV +R+G Sbjct: 18 TLADRLTLVLAEQLRSGVYPVNARLPTERTMAEEFGVSRTVVREVISRLKSEGLVETRQG 77 Query: 89 SGTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLAI 148 SGT VL + FRL + + VLR+IELR G+E +MAALAA+RRT+++ I Sbjct: 78 SGTAVLDPQSSAAFRLS---SSENNPAEGVLRIIELRCGIEAQMAALAARRRTASEMAEI 134 Query: 149 QQALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEA 208 + AL+ ID A A G DGV ED FH AIS A+ NP YT L+ L++ L AIRV R NEA Sbjct: 135 KHALKMIDRAVANGGDGVKEDLEFHMAISRATRNPHYTDLLGMLTRALKDAIRVTRSNEA 194 Query: 209 RSNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRLQAADRAFWASAEGQAAA 268 R +F QVRAEH A++ AI A D EAAR AALRHME++ R++ A+ FW A Sbjct: 195 RRADFTAQVRAEHEAISAAILARDPEAARVAALRHMESTVARIELAEAGFWTGERRDTAQ 254 Query: 269 R----DLARVRDA 277 R DL V DA Sbjct: 255 RLARTDLKTVLDA 267 >Q46NK8.1 Q46NK8_CUPPJ Transcriptional regulator, GntR family Length = 288 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 138/274 (50%), Positives = 174/274 (63%), Gaps = 8/274 (2%) Query: 1 MRAMKTSPSSSAAAQAVPPAPGSARGKVTLADHVTSVLARQIRAGEFAPETRLPSEMELT 60 M ++ ++ AQA G + + TLAD VT LA QIR G + RLP+E +T Sbjct: 1 MWSITVQSTTENLAQAEQLPTGKSGFEPTLADRVTEHLAGQIRRGMYPVNARLPTEKFMT 60 Query: 61 ERFSVSRTVIREAISRLKSEGLVGSRRGSGTVVLPANPATP--FRLDLDVDDGRDSIQAV 118 E+F VSRTVIREAISRLKSEGLV SR+GSGTVVL NPAT FRL G D V Sbjct: 61 EQFGVSRTVIREAISRLKSEGLVESRQGSGTVVL--NPATAEVFRLG---RGGSDPALGV 115 Query: 119 LRVIELRRGVEGEMAALAAQRRTSAQNLAIQQALQAIDEAAAAGRDGVPEDFAFHAAISN 178 +R++ELRRG+E EMAALAA+RR+ Q I+ AL ID A AG DGV ED AFH A+S Sbjct: 116 VRILELRRGIEAEMAALAAERRSERQMDDIRSALHEIDSAVRAGGDGVEEDLAFHLAVSR 175 Query: 179 ASHNPLYTSLVQFLSQFLHAAIRVARMNEARSNEFVQQVRAEHAALAEAISAGDAEAARA 238 A+ NP YT L+ L++ L AIR+ R NEAR ++ VR EHA + AI D + AR Sbjct: 176 ATGNPHYTELLGMLTRALRDAIRLTRGNEARRSDLAAHVRTEHAEICAAIETQDPQRARQ 235 Query: 239 AALRHMENSAQRLQAADRAFWASAEGQAAARDLA 272 AA HM N+ +R+ AA+R FW + + + AA+ LA Sbjct: 236 AAFLHMRNTEERILAAERDFW-TGDSRTAAQRLA 268 >Q471Y5.1 Q471Y5_CUPPJ Transcriptional regulator, GntR family Length = 245 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 146/222 (65%), Gaps = 3/222 (1%) Query: 30 LADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRGS 89 L D+V L +I++G FA +LP+E L+E F VSRTVIREAISRLK EG+V SR+GS Sbjct: 10 LTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVIREAISRLKYEGVVESRQGS 69 Query: 90 GTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLAIQ 149 G V P R+D D G ++ +VL+++ELRR +E E+AA AA+RRT A AI Sbjct: 70 GVFVTEQAGIRPLRIDY-TDTG--TLDSVLQIVELRRAIEAEVAAQAARRRTDATMTAID 126 Query: 150 QALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEAR 209 AL +D A G DGV D AFH AI+ A+ NP + ++FLSQ+L AA RV R NEAR Sbjct: 127 TALARLDAEVAEGGDGVAADVAFHRAIATATGNPYFLKTLEFLSQYLEAATRVTRTNEAR 186 Query: 210 SNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRL 251 +F +QVR EH A+ AI AGDA AAR AA HM N+A+RL Sbjct: 187 RADFTRQVREEHQAIVAAIRAGDALAARNAAQNHMYNAARRL 228 >B3R555.1 B3R555_CUPTR Putative transcriptional regulator, GntR family Length = 244 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 146/222 (65%), Gaps = 3/222 (1%) Query: 30 LADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRGS 89 L D+V L +I++G FA +LP+E L+E F VSRTV+REAISRLK EG+V SR+GS Sbjct: 10 LTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVVREAISRLKYEGVVESRQGS 69 Query: 90 GTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLAIQ 149 G V P R+D D G ++++VL+++ELRR +E E+AA AA+RR+ A AI Sbjct: 70 GVFVTLQAGIRPLRIDY-TDTG--ALESVLQIVELRRAIEAEVAAQAARRRSDASMAAID 126 Query: 150 QALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEAR 209 AL +D+ A G DGV ED FH AI+ A+ NP + ++FLSQ+L AA RV R NEAR Sbjct: 127 AALARLDDVVAQGGDGVAEDVGFHRAIAEATGNPYFLKTLEFLSQYLEAATRVTRTNEAR 186 Query: 210 SNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRL 251 +F +QVR EH A+ AI AGD AAR AA HM N+A RL Sbjct: 187 RADFSRQVREEHQAIVAAIRAGDPLAARNAAQNHMYNAAHRL 228 >E8TZW2.1 E8TZW2_ALIDB GntR domain protein Length = 259 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/231 (50%), Positives = 153/231 (66%), Gaps = 6/231 (2%) Query: 30 LADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRGS 89 LAD V L +IR G AP RLP+E L +F+VSRTV+REA+SRLKS G+V SR+GS Sbjct: 14 LADQVADALEAEIRGGRLAPGARLPTEAVLATQFAVSRTVVREAVSRLKSLGMVDSRQGS 73 Query: 90 GTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLA-I 148 G V A A P R + RD AV+++ ELRR +E E+AALAA+RRT Q+LA I Sbjct: 74 GVYVRAAG-AEPLRFEAAHLASRD---AVVQMAELRRPLESEVAALAAERRTP-QDLARI 128 Query: 149 QQALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEA 208 + A+ A+DEA AAG+ G +D AFH A++ A+HNP +Q+L L AIRV R NEA Sbjct: 129 RAAIGALDEAVAAGQGGAEQDLAFHLAVAEAAHNPFLIGTLQYLHGLLQGAIRVTRANEA 188 Query: 209 RSNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRLQAADRAFW 259 R ++F ++V EH +A+AI AGD AAR AA HM+N+ +R+ AD AFW Sbjct: 189 RRDDFAREVAREHERIAQAIEAGDPVAAREAAKTHMDNAIRRIGQADPAFW 239 >Q0KBC6.1 Q0KBC6_CUPNH Transcriptional regulator, GntR-family Length = 244 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 145/222 (65%), Gaps = 3/222 (1%) Query: 30 LADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRGS 89 L D+V L +I++G FA +LP+E L+ F VSRTV+REAISRLK EG+V SR+GS Sbjct: 10 LTDNVAEQLLDKIQSGAFARGDKLPTEAVLSGEFGVSRTVVREAISRLKYEGVVESRQGS 69 Query: 90 GTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLAIQ 149 G V P R+D + G ++++VL+++ELRR +E E+AA AA+RRT A AI Sbjct: 70 GVFVTLQAGIRPLRIDY-TETG--TLESVLQIVELRRAIEAEVAAQAARRRTDASMAAID 126 Query: 150 QALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEAR 209 AL +DE A G DGV ED AFH AI+ A+ NP + + FLSQ+L AA RV R NEAR Sbjct: 127 AALARLDEEVAQGGDGVAEDVAFHRAIAEATGNPYFLKTLAFLSQYLEAATRVTRTNEAR 186 Query: 210 SNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRL 251 +F +QVR EH A+ AI AGD AAR AA HM N+A RL Sbjct: 187 RADFSRQVREEHQAIVAAIRAGDPLAARNAAQNHMYNAAHRL 228 >Q1LMB3.1 Q1LMB3_RALME Transcriptional regulator, GntR-family Length = 247 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 140/222 (63%), Gaps = 3/222 (1%) Query: 30 LADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRGS 89 L D V L +I G F +LP+E L+E F VSRTVIREAI+RLK EGLV SR+GS Sbjct: 10 LTDSVAEQLLEKIEDGMFPRGAKLPTEAVLSEEFGVSRTVIREAIARLKYEGLVESRQGS 69 Query: 90 GTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLAIQ 149 G V P R+D D G ++++VL+++ELRR +E E+AA AA+RRT A I Sbjct: 70 GVFVTEQAGIRPLRIDY-TDVG--TLESVLQIVELRRSIEAEVAAQAARRRTDATMANID 126 Query: 150 QALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEAR 209 AL ID AAG DGV D FH AI+ A+ NP + + FLSQ+L A RV R NEAR Sbjct: 127 AALARIDAEVAAGGDGVDADVGFHRAIAEATGNPYFLKTLAFLSQYLETATRVTRTNEAR 186 Query: 210 SNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRL 251 +F +QVR EH A+ AI AGD +AAR AA HM N+A+RL Sbjct: 187 REDFSRQVREEHQAIVAAIRAGDPDAARNAAQNHMYNAARRL 228 >A4SZD6.1 A4SZD6_POLSQ Transcriptional regulator, GntR family Length = 266 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 147/243 (60%), Gaps = 4/243 (1%) Query: 29 TLADHVTSVLARQIRAGEFAPETRLPSEMELTERFSVSRTVIREAISRLKSEGLVGSRRG 88 L + + L Q A P TRLPSE + + F VSRTV+REAI+ LK + ++ SR+G Sbjct: 21 NLGTRIANTLLNQFHADNLNPNTRLPSESVIAKHFKVSRTVVREAIAILKKDEILQSRKG 80 Query: 89 SGTVVLPANPATPFRLDLDVDDGRDSIQAVLRVIELRRGVEGEMAALAAQRRTSAQNLAI 148 SGT + P +L + S+ A+ +IE+RRGVE E+AALAA RRT Q I Sbjct: 81 SGTFIGEKFKPNP---ELVNEVAEQSVHALQNIIEVRRGVESEIAALAAIRRTPGQLSDI 137 Query: 149 QQALQAIDEAAAAGRDGVPEDFAFHAAISNASHNPLYTSLVQFLSQFLHAAIRVARMNEA 208 ++AL+ I + AG++GV ED FH I+ A+ NP + V S L AA V R NE Sbjct: 138 EEALRKIKKVTDAGQNGVEEDVRFHMLIAQATGNPYWLKFVDTFSYSLRAATSVTRANED 197 Query: 209 RSNEFVQQVRAEHAALAEAISAGDAEAARAAALRHMENSAQRLQAADRAFWASAEGQAAA 268 R +F QQV+ EH A+ AI++GDA+ AR AA HM N+A+RL+ ADR+FW EG A A Sbjct: 198 RRLDFAQQVQEEHEAIVAAIASGDADQARLAASIHMINAAERLKLADRSFWKE-EGSALA 256 Query: 269 RDL 271 RD+ Sbjct: 257 RDI 259