BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0002.p         (84 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J0I8.1 D8J0I8_HERSS Putative uncharacterized protein                159   9e-38

>D8J0I8.1 D8J0I8_HERSS Putative uncharacterized protein
          Length = 84

 Score =  159 bits (403), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 81/84 (96%), Positives = 83/84 (98%)

Query: 1  MRLPRKLPRLTQLPLGVEITLLLVIKIALITVLAKTFFAHPQAKHMQMPVQSVEQRMLSF 60
          MRLPRKLPRLTQLPLGVEITLLLVIKIALITVLAKTFFAHP+AKHMQMPVQSVEQRMLSF
Sbjct: 1  MRLPRKLPRLTQLPLGVEITLLLVIKIALITVLAKTFFAHPEAKHMQMPVQSVEQRMLSF 60

Query: 61 AAPPAATPQQQYQHQDLSAKQQPE 84
          A PPAATPQQ+YQHQDLSAKQQPE
Sbjct: 61 APPPAATPQQRYQHQDLSAKQQPE 84