BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0035.p         (80 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G3X4.1 A4G3X4_HERAR Putative uncharacterized protein                 75   2e-12

>A4G3X4.1 A4G3X4_HERAR Putative uncharacterized protein
          Length = 83

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 39/55 (70%)

Query: 1  MPTEQIGDYEVEYAGVRVVGGEEWVAQVAIFGHSTNPMHRNPVFPAQRVLADQTF 55
          MP+E +G YEVEY+ V    G+ WVA VAI+GHS NPMHRN VFP QRV  +  F
Sbjct: 1  MPSETMGLYEVEYSAVPATDGKAWVAHVAIYGHSNNPMHRNCVFPDQRVSLESVF 55