BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0034.p         (78 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6SU06.1 A6SU06_JANMA Putative uncharacterized protein                 70   1e-10

>A6SU06.1 A6SU06_JANMA Putative uncharacterized protein
          Length = 83

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%)

Query: 1  VYKRPDGAGLFSYLVIPHEKMLPDEVTNTDWQIHEQNVDFERDGKRHFTLQAEDAFMQIG 60
          +Y+R + AG FSYL +P  K+LP+EV NTDW+  +++VD E + K       +D   QI 
Sbjct: 5  IYRRAENAGHFSYLAVPEGKLLPEEVVNTDWEPTDRSVDLEDNAKHLADFAIDDPIEQIS 64

Query: 61 EKGYAITHL 69
           KGYAIT +
Sbjct: 65 AKGYAITSV 73