BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0154.p         (71 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0023 [S] COG2879 Uncharacterized small protein Rso Ralstonia ...    88   6e-18
ybdD [S] COG2879 Uncharacterized small protein Eco Escherichia c...    84   8e-17
STM0601 [S] COG2879 Uncharacterized small protein Sty Salmonella...    82   4e-16
yjiX [S] COG2879 Uncharacterized small protein Eco Escherichia c...    81   5e-16
ECs5312 [S] COG2879 Uncharacterized small protein Ecs Escherichi...    81   5e-16
PA4605 [S] COG2879 Uncharacterized small protein Pae Pseudomonas...    81   5e-16
STM4531 [S] COG2879 Uncharacterized small protein Sty Salmonella...    81   6e-16
ZyjiX [S] COG2879 Uncharacterized small protein EcZ Escherichia ...    80   9e-16

>RSc0023 [S] COG2879 Uncharacterized small protein Rso Ralstonia
          solanacearum
          Length = 64

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 49/57 (85%), Gaps = 2/57 (3%)

Query: 15 RQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGRVGRCC 71
          R +G+ + LMVG+P+YD YV HMQ++HPDQ VM+YEEFFRERQ+ARY  KGRVGRCC
Sbjct: 10 RYLGQAMRLMVGVPDYDTYVRHMQETHPDQPVMTYEEFFRERQDARY--KGRVGRCC 64


>ybdD [S] COG2879 Uncharacterized small protein Eco Escherichia coli
          K12
          Length = 65

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 7  LTQLLAWRRQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGR 66
             L    + +G+   LM+GMP+YDNYV HM+ +HPDQ  M+YEEFFRERQ+ARYGGKG 
Sbjct: 2  FDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGG 61

Query: 67 VGRCC 71
            RCC
Sbjct: 62 A-RCC 65


>STM0601 [S] COG2879 Uncharacterized small protein Sty Salmonella
          typhimurium LT2
          Length = 65

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 46/57 (80%), Gaps = 1/57 (1%)

Query: 15 RQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGRVGRCC 71
          + +G+   +M+G+P+YDNYV HM+ +HPDQ  M+YEEFFRERQ+ARYGGKG   RCC
Sbjct: 10 KYLGQAAKMMIGVPDYDNYVEHMRITHPDQTPMTYEEFFRERQDARYGGKGGA-RCC 65


>yjiX [S] COG2879 Uncharacterized small protein Eco Escherichia coli
          K12
          Length = 67

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 14 RRQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGRVG-RCC 71
          ++ +G+   +++G+P+YDNYV HM+ +HPD+  MSYEEFFRERQ ARYGG G+ G RCC
Sbjct: 9  KKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC 67


>ECs5312 [S] COG2879 Uncharacterized small protein Ecs Escherichia coli
          O157:H7
          Length = 67

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 14 RRQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGRVG-RCC 71
          ++ +G+   +++G+P+YDNYV HM+ +HPD+  MSYEEFFRERQ ARYGG G+ G RCC
Sbjct: 9  KKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC 67


>PA4605 [S] COG2879 Uncharacterized small protein Pae Pseudomonas
          aeruginosa
          Length = 67

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 1/58 (1%)

Query: 15 RQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARY-GGKGRVGRCC 71
          + +G+   ++VGMP+YD YV HM+  HPD+ VM+YEEFFRERQEARY GGKGR  RCC
Sbjct: 10 KYLGQAARMLVGMPDYDTYVEHMRNKHPDKPVMTYEEFFRERQEARYGGGKGRPIRCC 67


>STM4531 [S] COG2879 Uncharacterized small protein Sty Salmonella
          typhimurium LT2
          Length = 67

 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 48/59 (81%), Gaps = 1/59 (1%)

Query: 14 RRQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGRVG-RCC 71
          ++ +G+   +++G+P+YDNYV HM+ +HPD+  M+YEEFFRERQ+ARYGG G+ G RCC
Sbjct: 9  KKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYEEFFRERQQARYGGDGKGGMRCC 67


>ZyjiX [S] COG2879 Uncharacterized small protein EcZ Escherichia coli
          O157:H7 EDL933
          Length = 67

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 7  LTQLLAWRRQVGRTLNLMVGMPEYDNYVAHMQKSHPDQRVMSYEEFFRERQEARYGGKGR 66
             L   ++  G+   +++G+P+YDNYV HM+ +HPD+  MSYEEFFRERQ ARYGG G+
Sbjct: 2  FGNLGQAKKYXGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGK 61

Query: 67 VG-RCC 71
           G RCC
Sbjct: 62 GGMRCC 67