BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0126.p (492 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1058 [O] COG0265 Trypsin-like serine proteases, typically per... 566 e-161 PA0766 [O] COG0265 Trypsin-like serine proteases, typically peri... 421 e-117 RSp1552 [O] COG0265 Trypsin-like serine proteases, typically per... 394 e-109 XF2241 [O] COG0265 Trypsin-like serine proteases, typically peri... 379 e-105 NMB0532 [O] COG0265 Trypsin-like serine proteases, typically per... 348 2e-95 NMA0710 [O] COG0265 Trypsin-like serine proteases, typically per... 344 3e-94 mll5022 [O] COG0265 Trypsin-like serine proteases, typically per... 310 5e-84 BMEI1330 [O] COG0265 Trypsin-like serine proteases, typically pe... 309 9e-84 AGc1792 [O] COG0265 Trypsin-like serine proteases, typically per... 306 1e-82 SMc02365 [O] COG0265 Trypsin-like serine proteases, typically pe... 302 1e-81 >RSc1058 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Rso Ralstonia solanacearum Length = 505 Score = 566 bits (1459), Expect = e-161, Method: Compositional matrix adjust. Identities = 287/459 (62%), Positives = 353/459 (76%), Gaps = 13/459 (2%) Query: 38 LPDFADIVERTGPGVVNIRTTERVRQNAQGQGGVDDPEMQEFFRRFFGIPIPRQQQPGTP 97 LPDFAD+VE+ P VVNIRTTE+VR Q D +M EFFRRFFG+P+P PG Sbjct: 44 LPDFADLVEKVSPAVVNIRTTEKVRM----QNNPSDDDMAEFFRRFFGVPMP--GTPGQG 97 Query: 98 RGNGKQGGQGQ-QEEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKREFKAKIV 156 +G ++ Q +EE RGVGSGFI+S DG+++TNAHVVEGA +YVTLTDKREFKAK++ Sbjct: 98 QGQKRRNAPPQAEEEQSRGVGSGFIMSGDGYVLTNAHVVEGAETIYVTLTDKREFKAKLI 157 Query: 157 GSDTRTDVAVLKIDGSNLPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIVSAKARDT 216 GSD RTDVA++K++ + LP L +GDSDK+RVGEWVLAIGSPFGL+NTVTAGIVSAK RDT Sbjct: 158 GSDKRTDVALVKVEATGLPSLKLGDSDKVRVGEWVLAIGSPFGLDNTVTAGIVSAKGRDT 217 Query: 217 GDYLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVPIDEALRVAD 276 GDYLP IQ+DVAVNPGNSGGPLINL+GEVIGIN+QI+S+SGG+MGISFA+PIDEA+RVA+ Sbjct: 218 GDYLPFIQSDVAVNPGNSGGPLINLRGEVIGINNQIFSQSGGYMGISFAIPIDEAMRVAE 277 Query: 277 QLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAGLEAGDIILK 336 QLK GRVTRGRIGV I V KD AESLGL RA+GA V VE+GGPA+KAG+EAGDI+LK Sbjct: 278 QLKTQGRVTRGRIGVAIDNVPKDAAESLGLGRARGAYVGNVESGGPADKAGIEAGDIVLK 337 Query: 337 YNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVELEAD-----KPKQAEE 391 +NG +E+ DL R VG +KPG +ATV +WRKG RD++VTV EL+ D + K + Sbjct: 338 FNGRDVEKAGDLQRQVGESKPGTRATVQVWRKGATRDLTVTVAELQPDTKVAQRGKGGQS 397 Query: 392 KKAKPG-NAPNSLGLVVSDLSDAQRKELKVDNGVLVEAVSGAAAAAGIRPGDVIQRLNEV 450 +PG N+LGLVV+DLS+ ++E K GV V+ G AA AGIRPGDVI R+ + Sbjct: 398 DNGQPGAGKQNALGLVVADLSEGAQREFKTKAGVEVQVADGPAARAGIRPGDVILRVGDT 457 Query: 451 DVKDAKQFAQLVSKLDAKKRAAVLVRRGDSSQFVPLRPN 489 DV AKQF +V +LD + AV VRRGD++Q V +RP+ Sbjct: 458 DVTSAKQFNDVVGRLDKSRMVAVFVRRGDATQVVTMRPS 496 >PA0766 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Pae Pseudomonas aeruginosa Length = 474 Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust. Identities = 232/475 (48%), Positives = 310/475 (65%), Gaps = 17/475 (3%) Query: 19 VAAPVALAAPPVASPAVAALPDFADIVERTGPGVVNIRTTERVRQNAQGQGGVDDPEMQ- 77 +AA VAL A +A A A LPDF +VE+ P VVNI T +++ A +G + P+++ Sbjct: 8 MAAMVALLALSLAMTARAELPDFTPLVEQASPAVVNISTRQKLPDRAMARGQLSIPDLEG 67 Query: 78 --EFFRRFFGIPIPRQQQPGTPRGNGKQGGQGQQEEVPRGVGSGFIISADGFIMTNAHVV 135 FR F IP Q P PRG QQ E + +GSGFIIS DG+I+TN HVV Sbjct: 68 LPPMFRDFLERSIP--QVPRNPRG--------QQREA-QSLGSGFIISNDGYILTNNHVV 116 Query: 136 EGASEVYVTLTDKREFKAKIVGSDTRTDVAVLKIDGSNLPRLNMGDSDKIRVGEWVLAIG 195 A E+ V L+D+ E KAK++G+D R+DVAVLKI+ NLP L +GDS+K++VGEWVLAIG Sbjct: 117 ADADEILVRLSDRSEHKAKLIGADPRSDVAVLKIEAKNLPTLKLGDSNKLKVGEWVLAIG 176 Query: 196 SPFGLENTVTAGIVSAKARDTGD--YLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIY 253 SPFG +++VTAGIVSAK R + Y+P IQTDVA+NPGNSGGPL+NL+GEV+GINSQI+ Sbjct: 177 SPFGFDHSVTAGIVSAKGRSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIF 236 Query: 254 SRSGGFMGISFAVPIDEALRVADQLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQGAL 313 +RSGGFMG+SFA+PID AL VADQLK +G+V+RG +GV I EV KD+AES GL + GAL Sbjct: 237 TRSGGFMGLSFAIPIDVALNVADQLKKAGKVSRGWLGVVIQEVNKDLAESFGLDKPSGAL 296 Query: 314 VQRVEAGGPAEKAGLEAGDIILKYNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNARD 373 V ++ GPA K GL+ GD+IL NG +I +DLP +VG+ KPG K + + R G + Sbjct: 297 VAQLVEDGPAAKGGLQVGDVILSLNGQSINESADLPHLVGNMKPGDKINLDVIRNGQRKS 356 Query: 374 VSVTVVELEADKPKQAEEKKAKPGNAPNSLGLVVSDLSDAQRKELKVDNGVLVEAVS-GA 432 +S+ V L D + A + N LG+ V+DL+ QRK L + GV+++ V G Sbjct: 357 LSMAVGSLPDDDEEIASMGAPGAERSSNRLGVTVADLTAEQRKSLDIQGGVVIKEVQDGP 416 Query: 433 AAAAGIRPGDVIQRLNEVDVKDAKQFAQLVSKLDAKKRAAVLVRRGDSSQFVPLR 487 AA G+RPGDVI L+ V K FA + L + ++ V R + F+ + Sbjct: 417 AAVIGLRPGDVITHLDNKAVTSTKVFADVAKALPKNRSVSMRVLRQGRASFITFK 471 >RSp1552 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Rso Ralstonia solanacearum Length = 490 Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust. Identities = 236/459 (51%), Positives = 294/459 (64%), Gaps = 30/459 (6%) Query: 34 AVAALPDFADIVERTGPGVVNIRTTERV-RQNAQG-QGGV--DDPEMQEFFRRFFGIPIP 89 AVA DF+ IVER GP VVNI TT R R + QG GV DDP EFFRRF Sbjct: 53 AVAVPMDFSAIVERYGPAVVNISTTARAQRTSIQGLPPGVSPDDP-FAEFFRRFM----- 106 Query: 90 RQQQPGTPRGNGKQGGQGQQEEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKR 149 Q Q Q ++V +G+GSGFI+S DG I+TNAHVV+GA EV V LTD+R Sbjct: 107 ------------PQAPQQQGDQVVKGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRR 154 Query: 150 EFKAKIVGSDTRTDVAVLKIDGSNLPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIV 209 EFKAK++G D ++DVAVL+I SNLP + +G +VGE VLAIGSP+G ENTVTAGIV Sbjct: 155 EFKAKVLGVDKQSDVAVLRIAASNLPTVQIGSPAGTKVGEPVLAIGSPYGFENTVTAGIV 214 Query: 210 SAKARDTGD--YLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVP 267 SAK+R D Y+P IQTDVAVNPGNSGGPL N +GEVIGINSQIYS++GG+ G+SFAVP Sbjct: 215 SAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVP 274 Query: 268 IDEALRVADQLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAG 327 ID A++V QL A+G+VTRGR+G+ + EV + +A+S L + +GALV VE GPA KAG Sbjct: 275 IDVAMKVEQQLVATGKVTRGRLGISVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAG 334 Query: 328 LEAGDIILKYNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVELEADKPK 387 L+ GD+IL+ I DLP V KPG+ + I R G +SVTV EA K Sbjct: 335 LQPGDVILQIGDVHIGHSGDLPEQVAEIKPGSTVPLQIIRHGKPTALSVTVG--EAKDAK 392 Query: 388 QAEEKKAKPGNAPNSLGLVVSDLSDAQRKELKVDNGVLVEAVSGAAAAAGIRPGDVIQRL 447 A A P LGL V L ++++ + G++V SG AA AGI+PGDVI L Sbjct: 393 VAANTSAAPDK--GRLGLAVRPLQAEEKRQSGLPGGLVVMDSSGPAAKAGIQPGDVILSL 450 Query: 448 NEVDVKDAKQFAQLVSKLDAKKRAAVLVRRGDSSQFVPL 486 N V A++ LV + A K A+LV+R D+ FVPL Sbjct: 451 NGTPVSSAQELRALVDR--AGKHVALLVQRDDAKIFVPL 487 >XF2241 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Xfa Xylella fastidiosa 9a5c Length = 514 Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/491 (45%), Positives = 296/491 (60%), Gaps = 31/491 (6%) Query: 21 APVALAAPPVASPA---VAALPDFADIVERTGPGVVNIRTTERVRQNAQGQGGVDDPEMQ 77 AP P +PA VA LPDF +V++ GPGVVNI T ++ + +G D ++ Sbjct: 34 APSTPIVTPSTTPAPQLVAGLPDFTQLVDQVGPGVVNIETVITRKKVGKRRGIPLDNDIP 93 Query: 78 EFFRRFFGIPIPRQQQPGTPRGNGKQGGQGQQEE---VPRGVGSGFIISADGFIMTNAHV 134 EFFRRFFG P Q P PRG GQ +E RG+GSGFIIS DG+I+TN HV Sbjct: 94 EFFRRFFG---PDFQMPNQPRG-------GQDDEGGIAGRGMGSGFIISKDGYILTNHHV 143 Query: 135 VEGASEVYVTLTDKREFKAKIVGSDTRTDVAVLKIDGSNLPRLNMGDSDKIRVGEWVLAI 194 + GASEV + LTD+REFKAKI+GSD + DVA+LKID NLP + +GDS ++ G+WV+AI Sbjct: 144 ITGASEVTIKLTDRREFKAKIIGSDEQYDVALLKIDAKNLPTVRIGDSSSLKSGQWVVAI 203 Query: 195 GSPFGLENTVTAGIVSAKARDTGD---YLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQ 251 GSPFGL+++VTAGIVSA R T D Y+P IQTDV +N GNSGGPL+N +GEVIGINSQ Sbjct: 204 GSPFGLDHSVTAGIVSALGRSTSDDQRYVPFIQTDVPINQGNSGGPLLNTRGEVIGINSQ 263 Query: 252 IYSRSGGFMGISFAVPIDEALRVADQLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQG 311 I+S SGG+MGISFA+PI+ A+ A+Q++ +G+V R +GV+IG + A+ LGL ++G Sbjct: 264 IFSASGGYMGISFAIPINLAINAAEQIRKTGKVQRSMLGVEIGPIDALKAQGLGLPDSRG 323 Query: 312 ALVQRVEAGGPAEKAGLEAGDIILKYNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNA 371 ALV + PA KAG+E GD+I NG I SDLP ++G PG KAT+ I R G Sbjct: 324 ALVNNIPPHSPAAKAGIEVGDVIRSVNGKVISSFSDLPPLIGMMPPGTKATLGIIRDGKP 383 Query: 372 RDVSVTVVELEADKPKQAEEKKAKPGNAPNS-----LGLVVSDLSDAQRKEL----KVDN 422 R++ VT+ L D +E P S LGL V +LS A+R+ L Sbjct: 384 REIVVTLSALNQDATASEDEDDTAPSKPETSANVELLGLQVENLSAAERERLASSQNAKG 443 Query: 423 GVLVEAVSGAAAAAGIRP---GDVIQRLNEVDVKDAKQFAQLVSKLDAKKRAAVLVRRGD 479 GV + AV+ A P G VI R+ V + + +++ +LV G Sbjct: 444 GVRITAVTAPWARNANPPLVEGLVILRIGRTPVSNVAELNRVLGNYKKGDVIMLLVTNGR 503 Query: 480 SSQFVPLRPNG 490 + + L+ G Sbjct: 504 GTFYSALKAGG 514 >NMB0532 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Nme Neisseria meningitidis MC58 Length = 499 Score = 348 bits (892), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 209/466 (44%), Positives = 282/466 (60%), Gaps = 38/466 (8%) Query: 38 LPDFADIVERTGPGVVNIRTTERVR-QNAQGQGGVD-DP-----EMQEFFRRFFGIPIPR 90 LPDFA +V+ GP VVNI+ R QN G D DP EFF+R +P Sbjct: 54 LPDFAQLVQSEGPAVVNIQAAPAPRTQNGSGNAENDSDPIADNDPFYEFFKRL----VP- 108 Query: 91 QQQPGTPRGNGKQGGQGQQEEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKRE 150 P P+ GG GSGFIIS DG+I+TN HVV G + V L DKRE Sbjct: 109 -NMPEIPQEEADDGG--------LNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKRE 159 Query: 151 FKAKIVGSDTRTDVAVLKIDGSN-LPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIV 209 + AK++GSD ++DVA+LKID + LP + +G+ ++ GEWV AIG+PFG +N+VTAGIV Sbjct: 160 YTAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGIV 219 Query: 210 SAKARDTGD--YLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVP 267 SAK R + Y P IQTDVA+NPGNSGGPL NLKG+V+GINSQIYSRSGGFMGISFA+P Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIP 279 Query: 268 IDEALRVADQLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAG 327 ID A+ VA+QLK +G+V RG++GV I EV+ +A+S GL +A GAL+ ++ G PAE+AG Sbjct: 280 IDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSPAERAG 339 Query: 328 LEAGDIILKYNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVEL-----E 382 L+AGDI+L +G I DLP MVG+ PG + ++ +WRKG + V + Sbjct: 340 LQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGNAAEHIGA 399 Query: 383 ADKPKQAEEKKAKPGN-APNSLGLVVSDLSDAQRKELKVDNGVLVEAVSGAAAAAGIRPG 441 + K +A + + G + S G+ + +D+ L +V VS AA AG+R G Sbjct: 400 SSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHL------VVVRVSDAAERAGLRRG 453 Query: 442 DVIQRLNEVDVKDAKQFAQLVSKLDAKKRAAVLVRRGDSSQFVPLR 487 D I + +V V D F + + K A K +L+ R ++ F+ L Sbjct: 454 DEILAVGQVPVNDEAGFRKAMDK--AGKNVPLLIMRRGNTLFIALN 497 >NMA0710 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain NmA Neisseria meningitidis Z2491 Length = 499 Score = 344 bits (882), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 207/465 (44%), Positives = 279/465 (60%), Gaps = 38/465 (8%) Query: 38 LPDFADIVERTGPGVVNIRTTERVR-QNAQGQGGVD-DP-----EMQEFFRRFFGIPIPR 90 LPDF +V+ GP VVNI+ R QN D DP EFF+R +P Sbjct: 54 LPDFVQLVQSEGPAVVNIQAAPAPRTQNGSSNAETDSDPLADSDPFYEFFKRL----VP- 108 Query: 91 QQQPGTPRGNGKQGGQGQQEEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKRE 150 P P+ GG GSGFIIS DG+I+TN HVV G + V L DKRE Sbjct: 109 -NMPEIPQEEADDGG--------LNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKRE 159 Query: 151 FKAKIVGSDTRTDVAVLKIDGSN-LPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIV 209 + AK++GSD ++DVA+LKID + LP + +G+ ++ GEWV AIG+PFG +N+VTAGIV Sbjct: 160 YTAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGIV 219 Query: 210 SAKARDTGD--YLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVP 267 SAK R + Y P IQTDVA+NPGNSGGPL NLKG+V+GINSQIYSRSGGFMGISFA+P Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIP 279 Query: 268 IDEALRVADQLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAG 327 ID A+ VA+QLK +G+V RG++GV I EV+ +A+S GL +A GAL+ ++ G PAE+AG Sbjct: 280 IDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSPAERAG 339 Query: 328 LEAGDIILKYNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVEL-----E 382 L AGDI+L +G I DLP MVG+ PG + ++ +WRKG + V + Sbjct: 340 LRAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGNAAEHIGA 399 Query: 383 ADKPKQAEEKKAKPGN-APNSLGLVVSDLSDAQRKELKVDNGVLVEAVSGAAAAAGIRPG 441 + K +A + + G + S G+ + +D+ L +V VS AA AG+R G Sbjct: 400 SSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHL------VVVRVSDAAERAGLRRG 453 Query: 442 DVIQRLNEVDVKDAKQFAQLVSKLDAKKRAAVLVRRGDSSQFVPL 486 D I + +V V D F + + K A K +L+ R ++ F+ L Sbjct: 454 DEILAVGQVPVNDEAGFRKAMDK--AGKNVPLLIMRRGNTLFIAL 496 >mll5022 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Mlo Mesorhizobium loti Length = 513 Score = 310 bits (794), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 203/497 (40%), Positives = 289/497 (58%), Gaps = 45/497 (9%) Query: 1 MTPLKTTLASALLAASVFVAAPVALAAPPVASPAVAALPDFADIVERTGPGVVNIRTTER 60 ++P+ + A + A S V+ VA PVA A FA IV P VV + + + Sbjct: 22 ISPVVVSFAQS--ANSTGVSKIVATTQTPVAG-ITAPNGSFAPIVAADKPAVVTVTSIMK 78 Query: 61 VRQNAQGQGGVDDPEM-------QEFFRRFFG---IPIPRQQQPGTPRGNGKQGGQGQQE 110 GQ DD M ++FR+FFG +P P+ TP QQ Sbjct: 79 ------GQPASDDDGMPLGNSPFDQYFRQFFGDQGMPAPQ-----TPP---------QQA 118 Query: 111 EVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKREFKAKIVGSDTRTDVAVLKID 170 + +GSGFI++ADG ++TN HVV+GAS + VTL D E AK+VG D + D+AVLKI Sbjct: 119 QRAEALGSGFIVTADGTVVTNNHVVDGASSIKVTLDDGTELPAKLVGRDAKNDLAVLKIK 178 Query: 171 GSN-LPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIVSAKARD--TGDYLPLIQTDV 227 LP + GDSD++ G+ VLAIG+PFG+ TVTAGIVSA+ RD +G + IQ D Sbjct: 179 SDKPLPTVKWGDSDRLMTGDQVLAIGNPFGIGTTVTAGIVSARGRDLHSGPFDDFIQIDA 238 Query: 228 AVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVPIDEALRVADQLKASGRVTRG 287 +N GNSGGPL+++ G V+GIN+ IYS +GG +G+ FA+P D+A +V +L G + G Sbjct: 239 PINHGNSGGPLVDVNGNVVGINTAIYSPNGGSVGVGFAIPSDQAQKVVAKLMKDGSIQYG 298 Query: 288 RIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAGLEAGDIILKYNGAAIERPSD 347 +GV+I EVT DVA ++GL A GALV +V PA AG+EAGD+I + G ++ P D Sbjct: 299 YLGVEIQEVTPDVASAIGLDHAGGALVSKVNDSSPAASAGVEAGDVITGFAGQDVKDPKD 358 Query: 348 LPRMVGSTKPGAKATVSIWRKGNARDVSVTVVELEAD-KPKQAEEK---KAKPGNAPNSL 403 L R V PGAK T+ +WRKG A +SV V + D K A E A+ G+ ++ Sbjct: 359 LSRAVADVAPGAKETLDVWRKGKAMQISVEVGQNSDDVKTASAGESGAPSAEQGSRAPAI 418 Query: 404 GLVVSDLSDAQRKELKV---DNGVLVEAVS--GAAAAAGIRPGDVIQRLNEVDVKDAKQF 458 GL + D++ R+E+ + ++G +V V+ AAAAAGI+PGD+I +N+ VK A+Q Sbjct: 419 GLGLMDITPDIRQEMNLAGNEHGAVVARVNPDKAAAAAGIQPGDIIVAVNQAPVKSARQV 478 Query: 459 AQLVSKLDAKKRAAVLV 475 Q +++ R +VL+ Sbjct: 479 TQAIAQASKSGRKSVLL 495 >BMEI1330 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Bme Brucella melitensis Length = 513 Score = 309 bits (792), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 203/473 (42%), Positives = 276/473 (58%), Gaps = 44/473 (9%) Query: 41 FADIVERTGPGVVNIRTTERVRQNAQ------GQGGVDD-PE---MQEFFRRFFGIPIPR 90 FAD+VE+ P VV++R + V++ + G G D P+ ++ FFR F G+ PR Sbjct: 53 FADLVEKVRPAVVSVRVKKDVQETSNRGPQFFGPPGFDQLPDGHPLKRFFRDF-GME-PR 110 Query: 91 QQQPGTPRGNGKQGGQGQQ---EEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTD 147 G R + ++G + E P GSGF+IS DG+++TN HVV V L D Sbjct: 111 ----GDSRSDNRRGKANKPRPGHERPVAQGSGFVISEDGYVVTNNHVVSDGDAYTVVLDD 166 Query: 148 KREFKAKIVGSDTRTDVAVLKIDGSNLPR-----LNMGDSDKIRVGEWVLAIGSPFGLEN 202 E AK++G+D RTD+AVLKI N P+ + GD +K+RVG+WV+A+G+PFGL Sbjct: 167 GTELDAKLIGADPRTDLAVLKI---NAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGG 223 Query: 203 TVTAGIVSAKARD--TGDYLPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFM 260 TVT+GIVSA+ RD G Y IQ D AVN GNSGGP +L GEVIGIN+ I+S SGG + Sbjct: 224 TVTSGIVSARGRDIGAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSV 283 Query: 261 GISFAVPIDEALRVADQLKASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAG 320 GI+FA+P A +V DQL G V RG IGVQI VTKD+A SLGLA +GA+V + Sbjct: 284 GIAFAIPSSTAKQVVDQLIKKGSVERGWIGVQIQPVTKDIAASLGLAEEKGAIVASPQDD 343 Query: 321 GPAEKAGLEAGDIILKYNGAAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVE 380 GPA KAG++AGD+I NG ++ P DL R V + PG KA +++WRK A +++VT+ Sbjct: 344 GPAAKAGIKAGDVITAVNGETVQDPRDLARKVANIAPGEKAALTVWRKNKAEEINVTIAA 403 Query: 381 LEADKPK---QAEEKKAKPGNAPNSLGLVVSDLSDAQRKELKVDNGVLVEAVSGAAAAA- 436 + DK K Q+ + G +S GL V D + GV+V V + AA Sbjct: 404 MPNDKGKSGSQSNDNDGGQGETLDSYGLTVVPSEDGK--------GVVVTDVDPDSDAAD 455 Query: 437 -GIRPGDVIQRLNEVDVKDAKQFAQLVSKLDAKKRAAVL--VRRGDSSQFVPL 486 GIR GDVI +N VK A + ++ + R AVL ++ D S+FV L Sbjct: 456 RGIRSGDVIVSVNNQTVKTAGDINKAITAAEKSGRKAVLLQLQSNDQSRFVAL 508 >AGc1792 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 523 Score = 306 bits (783), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 203/519 (39%), Positives = 292/519 (56%), Gaps = 52/519 (10%) Query: 2 TPLKTTLASAL--LAASVFVAAPV--ALAAP-PVASPAVAALPDFADIVERTGPGVVNIR 56 T LK T L L S +AAP+ + AAP V +P V P FA++V+ P VV++R Sbjct: 18 TALKATTVGGLAALMLSTGIAAPILHSFAAPVEVTAPQV---PSFANVVDAVSPAVVSVR 74 Query: 57 TTERVRQNAQGQGGV-------------DDPEMQEFFRRFFGIPIPRQQQPGTPRG-NGK 102 V+ + DD ++ FF+ F G Q Q + RG N Sbjct: 75 VQSNVQPASDDSSNFSFNFGGRGLDQLPDDHPLKRFFKEFGG-----QNQDRSDRGPNRH 129 Query: 103 QGGQGQQEEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKREFKAKIVGSDTRT 162 + G+G V +G SGF IS DG+++TN HVV+ S V + D E +AK+VG D RT Sbjct: 130 RDGKGPLRPVAQG--SGFFISEDGYVVTNNHVVDDGSAYTVVMNDGTELEAKLVGRDPRT 187 Query: 163 DVAVLKID-GSNLPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIVSAKARD--TGDY 219 D+A+LK+D + D KIRVG+WV+A+G+PFGL TVT+GI+SA+ RD +G Y Sbjct: 188 DLALLKVDVNRKFTYVKFADDTKIRVGDWVVAVGNPFGLGGTVTSGIISARGRDIGSGPY 247 Query: 220 LPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVPIDEALRVADQLK 279 +Q D AVN GNSGGP NL GEV+GIN+ I+S SGG +GI+FA+P A V L+ Sbjct: 248 DDYLQIDAAVNRGNSGGPAFNLNGEVVGINTAIFSPSGGNVGIAFAIPSSVAKDVIADLQ 307 Query: 280 ASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAGLEAGDIILKYNG 339 G+V RG +GVQI V+KD+AESLGLA A+GALV ++G P +KAG++ GDII NG Sbjct: 308 KDGKVERGWLGVQIQPVSKDIAESLGLAEAKGALVVSPQSGSPGDKAGIKQGDIITAVNG 367 Query: 340 AAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVELEADK-----PKQAEEKKA 394 ++ DL R +G P +K +S+WR G ++ V+VT+ +L +D+ P Q ++K Sbjct: 368 DPVKDARDLSRRIGGMAPNSKVEISLWRGGKSQSVTVTLGDLTSDEASKATPSQNDDKGG 427 Query: 395 KPGNAP---NSLGLVVSDLSDAQRKELKVDNGVLVEAV--SGAAAAAGIRPGDVIQRLNE 449 ++ +SLGL VS D NG+ + V AAA G++ G+ I +N Sbjct: 428 SQSSSEKVLSSLGLTVSPSDDG--------NGLAITDVDPDSDAAARGLKTGEKITSVNN 479 Query: 450 VDVKDAKQFAQLV--SKLDAKKRAAVLVRRGDSSQFVPL 486 V A +++ +K D + +A ++ D S+F+ L Sbjct: 480 QQVASAADIEKILEQAKKDGRSKALFQIQTDDGSRFIAL 518 >SMc02365 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Sme Sinorhizobium meliloti Length = 504 Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 202/518 (38%), Positives = 287/518 (55%), Gaps = 55/518 (10%) Query: 4 LKTTLASALLAASVFVAAPVALA-----APPVASPAVAALPDFADIVERTGPGVVNIRTT 58 LKTT + L A + P +A A V +PAV P FA++V+ P VV++R Sbjct: 2 LKTTTVAGLAAVLLTTGLPAEVAQSFAEAVRVQAPAV---PSFANVVDAVSPAVVSVRVQ 58 Query: 59 ERVRQNAQ---------GQGGVDDPEMQEFFRRFFGIPIPRQQQPGT-------PRGNGK 102 R R + G+G D PE RRFF PR+ PRG G+ Sbjct: 59 ARERVSDDESNFTFDFGGRGFEDLPEDHPL-RRFFREFAPRENDRADRWRDRRGPRGEGR 117 Query: 103 QGGQGQQEEVPRGVGSGFIISADGFIMTNAHVVEGASEVYVTLTDKREFKAKIVGSDTRT 162 PR GSGF I+ DG+++TN HVV S V + D E AK+VG D+RT Sbjct: 118 L--------RPRAQGSGFFITEDGYLVTNNHVVSDGSAFTVIMNDGTELDAKLVGKDSRT 169 Query: 163 DVAVLKIDGS-NLPRLNMGDSDKIRVGEWVLAIGSPFGLENTVTAGIVSAKARD--TGDY 219 D+AVLK+D ++ D +K+RVG+WV+A+G+PFGL TVTAGI+SA+ RD +G Y Sbjct: 170 DLAVLKVDDKRKFTYVSFADDEKVRVGDWVVAVGNPFGLGGTVTAGIISARGRDIGSGPY 229 Query: 220 LPLIQTDVAVNPGNSGGPLINLKGEVIGINSQIYSRSGGFMGISFAVPIDEALRVADQLK 279 +Q D AVN GNSGGP NL GEV+GIN+ I+S SGG +GI+FA+P A V D L Sbjct: 230 DDYLQVDAAVNRGNSGGPTFNLSGEVVGINTAIFSPSGGNVGIAFAIPASVAKDVVDSLI 289 Query: 280 ASGRVTRGRIGVQIGEVTKDVAESLGLARAQGALVQRVEAGGPAEKAGLEAGDIILKYNG 339 G V+RG +GVQI VTKD+AESLGL+ A GALV +AG P EKAG++ GD++ NG Sbjct: 290 KDGTVSRGWLGVQIQPVTKDIAESLGLSEANGALVVEPQAGSPGEKAGIKNGDVVTALNG 349 Query: 340 AAIERPSDLPRMVGSTKPGAKATVSIWRKGNARDVSVTVVELEADKPK------QAEEKK 393 ++ P DL R V + +PG+ A V++WR G + V++ + L +D + +A+ + Sbjct: 350 EPVKDPRDLARRVAALRPGSTAEVTLWRSGKSETVNLEIGTLPSDAKEPAPATGEAQPDE 409 Query: 394 AKPG-NAPNSLGLVVSDLSDAQRKELKVDNGVLVEAVSGAAAAA--GIRPGDVIQRLNEV 450 + G A LGL V+ D + GV + +V + A G++ G+ I +N Sbjct: 410 GQAGEEALADLGLTVTPSEDGK--------GVTIASVDPDSDAGDRGLKEGEKIVSVNNQ 461 Query: 451 DVKDAKQFAQLV--SKLDAKKRAAVLVRRGDSSQFVPL 486 +VK A +++ +K D + +A + + S+FV L Sbjct: 462 EVKSADDVLKVINNAKKDGRSKALFQIEAQEGSRFVAL 499