BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0101.p (385 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2338 [L] COG2256 ATPase related to the helicase subunit of th... 543 e-154 NMA1433 [L] COG2256 ATPase related to the helicase subunit of th... 536 e-152 NMB1258 [L] COG2256 ATPase related to the helicase subunit of th... 534 e-151 PA2613 [L] COG2256 ATPase related to the helicase subunit of the... 471 e-132 PM0257 [L] COG2256 ATPase related to the helicase subunit of the... 426 e-119 STM0962 [L] COG2256 ATPase related to the helicase subunit of th... 421 e-117 HI1590 [L] COG2256 ATPase related to the helicase subunit of the... 418 e-116 XF1453 [L] COG2256 ATPase related to the helicase subunit of the... 418 e-116 ycaJ [L] COG2256 ATPase related to the helicase subunit of the H... 417 e-116 ECs0977 [L] COG2256 ATPase related to the helicase subunit of th... 417 e-116 >RSc2338 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Rso Ralstonia solanacearum Length = 449 Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust. Identities = 281/385 (72%), Positives = 311/385 (80%), Gaps = 5/385 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MI WGPPGVGKTTLARL A AF+ EFIALSAV SGVKDIR A+E+AEQ A G+ T++FV Sbjct: 53 MILWGPPGVGKTTLARLMADAFDAEFIALSAVLSGVKDIRDAVERAEQFRAHGRRTLVFV 112 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNKSQQDA LP+ ESGL TFIGATTENPSFEVN ALLSRA VYVLKSL+D+ELKQ Sbjct: 113 DEVHRFNKSQQDAFLPHVESGLFTFIGATTENPSFEVNGALLSRAAVYVLKSLSDDELKQ 172 Query: 121 LLKRAQDKALGDLEFDQQATDTIIGYADGDARRFLNLLEQTDTAART-TGTRLVTA---E 176 L +RA+ + LG LE+ A D ++ ADGD R+ LN +E AAR G+ V A Sbjct: 173 LAERARQE-LGGLEWAPAAVDAVVASADGDGRKLLNNIEIVTRAARAQAGSETVPAIDEA 231 Query: 177 FLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSRRI 236 L +AL+ N RRFDKGGD FYDQISALHKSVRGS PDAALYW RMLDGGADPRYL+RRI Sbjct: 232 LLASALSENLRRFDKGGDAFYDQISALHKSVRGSDPDAALYWFCRMLDGGADPRYLARRI 291 Query: 237 VRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAYNA 296 VRMAWEDIGLADPRA +I DAA TYERLGSPEGELAL QA+IYLA+A KSNAGYNAYNA Sbjct: 292 VRMAWEDIGLADPRAARITLDAAETYERLGSPEGELALAQALIYLAIAPKSNAGYNAYNA 351 Query: 297 ARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEPGW 356 ARAFV DKSR VPVHLRNAPT+LMKELGYGH YRYAHDEP AYAAGETY PD + GW Sbjct: 352 ARAFVGHDKSRAVPVHLRNAPTRLMKELGYGHAYRYAHDEPEAYAAGETYFPDDLSPQGW 411 Query: 357 YQPVPRGLEIKIGEKLATLRQWDEE 381 Y P PRGLE KIG+KL LR+ D + Sbjct: 412 YVPTPRGLEGKIGDKLRHLRELDAQ 436 >NMA1433 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase NmA Neisseria meningitidis Z2491 Length = 436 Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust. Identities = 272/389 (69%), Positives = 318/389 (81%), Gaps = 9/389 (2%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 M+ WGPPGVGKTTLAR+ A +F +F+ +SAVFSGVKDIR A+++AE L G+ TILFV Sbjct: 50 MLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQGRATILFV 109 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNK+QQDA LP+ ESGL+TFIGATTENPSFEVN ALLSRAQVYVL+ L+ ++LK+ Sbjct: 110 DEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQPLSSDDLKK 169 Query: 121 LLKRAQDKALGDLEFDQQATDT-----IIGYADGDARRFLNLLEQTDTAARTTGTRLVTA 175 L+ K L E+ + +T ++ DGDARR LNLLEQ AA T + +TA Sbjct: 170 LIA----KVLALPEYQEFTIETDAQKLLVNTVDGDARRLLNLLEQLLRAADTRRLKNLTA 225 Query: 176 EFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSRR 235 EFL ++L RRFDKGG++FY+QISALHKSVRGSHP+AALYW RMLDGG DPRYL+RR Sbjct: 226 EFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARR 285 Query: 236 IVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAYN 295 IVR+AWEDIGLADPRA+QIANDAA T+ERLGSPEGELAL QAV+YLA AAKSNAGY AYN Sbjct: 286 IVRIAWEDIGLADPRALQIANDAAATFERLGSPEGELALAQAVLYLAAAAKSNAGYKAYN 345 Query: 296 AARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEPG 355 R FVK++ S EVPVHLRNAPTKLMKELGYG EYRYAHDEPNAYAAGE+Y+PDG++EP Sbjct: 346 QMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAAGESYMPDGLDEPD 405 Query: 356 WYQPVPRGLEIKIGEKLATLRQWDEEARK 384 +YQPVPRGLEIKIGEKLA L+ DEE K Sbjct: 406 FYQPVPRGLEIKIGEKLAWLKSLDEEVLK 434 >NMB1258 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Nme Neisseria meningitidis MC58 Length = 436 Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust. Identities = 271/389 (69%), Positives = 317/389 (81%), Gaps = 9/389 (2%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 M+ WGPPGVGKTTLAR+ A +F +F+ +SAVFSGVKDIR A+++AE L G+ TILFV Sbjct: 50 MLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQGRATILFV 109 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNK+QQDA LP+ ESGL+TFIGATTENPSFEVN ALLSRAQVYVL+ L+ ++LK+ Sbjct: 110 DEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQPLSSDDLKK 169 Query: 121 LLKRAQDKALGDLEFDQQATDT-----IIGYADGDARRFLNLLEQTDTAARTTGTRLVTA 175 L+ K L E+ + +T ++ ADGDARR LNLLEQ AA T + +TA Sbjct: 170 LIA----KVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLRAADTRRLKNLTA 225 Query: 176 EFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSRR 235 EFL ++L RRFDKGG++FY+QISALHKSVRGSHP+AALYW RMLDGG DPRYL+RR Sbjct: 226 EFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARR 285 Query: 236 IVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAYN 295 IVR+AWEDIGLADPRA QIANDAA T+ERLGSPEGELAL QAV+YLA AAKSNAGY AYN Sbjct: 286 IVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAAAKSNAGYKAYN 345 Query: 296 AARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEPG 355 R FVK++ S EVPVHLRNAPTKLMKELGYG EYRYAHDEPNAY+AGE+Y+PDG++EP Sbjct: 346 QMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYSAGESYMPDGLDEPD 405 Query: 356 WYQPVPRGLEIKIGEKLATLRQWDEEARK 384 +YQPVPRGLEIKIGEKL L+ DEE K Sbjct: 406 FYQPVPRGLEIKIGEKLEWLKSLDEEVLK 434 >PA2613 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Pae Pseudomonas aeruginosa Length = 441 Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust. Identities = 240/384 (62%), Positives = 287/384 (74%), Gaps = 7/384 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAM-GKHTILF 59 MIFWGPPGVGKTTLARL A + F +SAV SGVK+IR A+E A+Q+ A G+ TILF Sbjct: 50 MIFWGPPGVGKTTLARLLAQVSDAHFETISAVLSGVKEIRQAVEVAKQHAAQYGRRTILF 109 Query: 60 VDEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELK 119 VDE+HRFNKSQQDA LPY E G + FIGATTENPSFE+N+ALLSRA+VYVLKSL + L+ Sbjct: 110 VDEVHRFNKSQQDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAALR 169 Query: 120 QLLKRA--QDKALGD--LEFDQQATDTIIGYADGDARRFLNLLEQTDTAARTTGTRLVTA 175 +L+ RA +DK LG L +++ ++ ADGD RR LNLLE A ++ Sbjct: 170 KLVGRALNEDKGLGKRKLRLPEESFQVLLAAADGDGRRLLNLLENAADLAEDGSE--ISP 227 Query: 176 EFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSRR 235 E LQN L RRFDKGG+ FYDQISALHKSVRGS+PDAALYW RMLDGG DP Y++RR Sbjct: 228 ELLQNLLGDTRRRFDKGGEAFYDQISALHKSVRGSNPDAALYWFARMLDGGCDPLYIARR 287 Query: 236 IVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAYN 295 +VRMA E++G ADPRA+ + A ERLGSPEGELA+ QA++YLA A KSNA Y+A+N Sbjct: 288 VVRMASEEVGNADPRALGLCLSAWDVQERLGSPEGELAVAQAIVYLACAPKSNAVYSAFN 347 Query: 296 AARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEPG 355 AA V + SREVP+HLRNAPTKLMK LGYG EYRYAHDEP+AYAAGE Y P+ +E Sbjct: 348 AAMRDVAESGSREVPLHLRNAPTKLMKSLGYGEEYRYAHDEPDAYAAGEDYFPEDLEPRR 407 Query: 356 WYQPVPRGLEIKIGEKLATLRQWD 379 +YQPVPRGLE+KI +KL L + D Sbjct: 408 YYQPVPRGLELKIRDKLEHLAELD 431 >PM0257 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Pmu Pasteurella multocida Length = 445 Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust. Identities = 214/390 (54%), Positives = 277/390 (71%), Gaps = 6/390 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MI WGPPG GKTTLA + A + +SAV SG+K+IR A+E+A++N + TILFV Sbjct: 53 MILWGPPGTGKTTLAEIIAHQIHADVERISAVTSGIKEIREAIERAKENRLAERRTILFV 112 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNKSQQDA LP+ E G + FIGATTENPSFE+N+ALLSRA+VY+LKSL+ +E+ + Sbjct: 113 DEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRAKVYILKSLSTQEITE 172 Query: 121 LLKRA---QDKALGDLEF--DQQATDTIIGYADGDARRFLNLLE-QTDTAARTTGTRLVT 174 +LK+A +++ LG + F ++ + + Y +GDAR LN LE D A T + +T Sbjct: 173 VLKQALLDEERGLGKVRFVLEENVLECLAEYVNGDARLALNSLELMADMAEETEAGKALT 232 Query: 175 AEFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSR 234 L+N L RFDK GD FYD ISALHKSVRGS PDAALYW R+L G DP Y++R Sbjct: 233 LSLLKNVLGERQARFDKQGDRFYDAISALHKSVRGSAPDAALYWYARILAAGGDPLYVAR 292 Query: 235 RIVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAY 294 R++ +A ED+G ADPRAMQ+A A + R+G+ EGE A+ QA++YLAVA KSNA Y A+ Sbjct: 293 RLLAIASEDVGNADPRAMQVALAAWDCFTRVGAAEGERAIAQAIVYLAVAPKSNAVYRAF 352 Query: 295 NAARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEP 354 N A+ VK+ EVP HLRNAPT LMK LGYG YRYAHDE +AYAAGE Y P+ +++ Sbjct: 353 NQAKQHVKETPDYEVPAHLRNAPTHLMKTLGYGEAYRYAHDEEHAYAAGENYFPEALKDT 412 Query: 355 GWYQPVPRGLEIKIGEKLATLRQWDEEARK 384 +Y P RG+EIKI EKL LRQ D++++K Sbjct: 413 QYYFPTHRGMEIKIKEKLDWLRQQDQQSKK 442 >STM0962 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Sty Salmonella typhimurium LT2 Length = 447 Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust. Identities = 222/389 (57%), Positives = 270/389 (69%), Gaps = 7/389 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MI WGPPG GKTTLA + A + +SAV SGVK+IR A+E+A QN G+ TILFV Sbjct: 53 MILWGPPGTGKTTLAEVIARYASADVERISAVTSGVKEIREAIERARQNRNAGRRTILFV 112 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNKSQQDA LP+ E G +TFIGATTENPSFE+NSALLSRA+VY+LKSLT ++++Q Sbjct: 113 DEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTTDDIEQ 172 Query: 121 LLKRA-QDKALG----DLEFDQQATDTIIGYADGDARRFLNLLEQ-TDTA-ARTTGTRLV 173 +L +A QDK G D+ + I +GDARR LN LE D A A +G R++ Sbjct: 173 VLDQAMQDKTRGYGDQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEADDSGKRVL 232 Query: 174 TAEFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLS 233 L S RFD GD FYD ISALHKSVRGS PDAALYW R++ G DP Y++ Sbjct: 233 LPALLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 Query: 234 RRIVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNA 293 RR + +A ED+G ADPRAMQ+A A + R+G EGE A+ QA++YLA A KSNA Y A Sbjct: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 Query: 294 YNAARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEE 353 + AA A ++ +VPVHLRNAPTKLMKE+GYG EYRYAHDEPNAYAAGE Y P I + Sbjct: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEVYFPPEIAQ 412 Query: 354 PGWYQPVPRGLEIKIGEKLATLRQWDEEA 382 +Y P RGLE KIGEKLA L + D+ + Sbjct: 413 TRYYHPTNRGLEGKIGEKLAWLAEQDQNS 441 >HI1590 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Hin Haemophilus influenzae Length = 446 Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/390 (55%), Positives = 271/390 (69%), Gaps = 6/390 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MIFWGPPG GKTTLA + A E +SAV SG+K+IR A+++A+QN + TILFV Sbjct: 53 MIFWGPPGTGKTTLAEIIAQRINAEVERISAVTSGIKEIREAIDRAKQNRLADRKTILFV 112 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNKSQQDA LP+ E G V FIGATTENPSFE+N+ALLSRA+VYVLKSLT E++Q Sbjct: 113 DEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVYVLKSLTTAEIEQ 172 Query: 121 LLKRAQD---KALGD--LEFDQQATDTIIGYADGDARRFLNLLE-QTDTAARTTGTRLVT 174 +L++A + + LG L ++ + Y +GDAR LN LE D A T + + Sbjct: 173 VLQQAVEDPKRGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKID 232 Query: 175 AEFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSR 234 L+ L RFDK GD FYD ISALHKSVRGS PDAALYW R+L G DP Y++R Sbjct: 233 RTLLKEVLGERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVAR 292 Query: 235 RIVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAY 294 R++ +A ED+G ADPRAMQ+A A + R+G+ EGE A+ QA+IYL+VA KSNA Y A+ Sbjct: 293 RLLAIASEDVGNADPRAMQVALAAWDCFSRVGAYEGERAIAQAIIYLSVAPKSNAVYTAF 352 Query: 295 NAARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEP 354 N A+ K +VP HLRNAPT LMKELGYG EYRYAHDEPNAYAAGE Y P +++ Sbjct: 353 NTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAAGENYFPPELKDT 412 Query: 355 GWYQPVPRGLEIKIGEKLATLRQWDEEARK 384 +Y P RG+EI+I EKL LR+ D+ A K Sbjct: 413 QYYFPTNRGMEIQIKEKLERLREQDKSAVK 442 >XF1453 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Xfa Xylella fastidiosa 9a5c Length = 429 Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust. Identities = 214/381 (56%), Positives = 271/381 (71%), Gaps = 6/381 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MI WGPPG GKTTL+ L A + EF A+SAV SG+ ++R + +A Q + G+ T+LFV Sbjct: 34 MILWGPPGCGKTTLSLLLAQYIDAEFHAVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFV 93 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFN QQDA LP+ E G + F+GATTENPSFE+NSALLSR +V+VL++++ +++ Sbjct: 94 DEVHRFNNMQQDAFLPHIERGSIIFVGATTENPSFELNSALLSRCRVHVLEAVSSQDIVV 153 Query: 121 LLKRA-QD--KALGD--LEFDQQATDTIIGYADGDARRFLNLLEQTDTAARTTGTRLVTA 175 L+RA QD + LG+ +E + + I ADGD RR L LLE A+ ++ TA Sbjct: 154 ALQRALQDTERGLGEQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDGQM-TA 212 Query: 176 EFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSRR 235 + L L SRRFDK G+ FYDQISALHKSVR S+PDAALYWL RMLDGG DP YL+RR Sbjct: 213 DLLSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARR 272 Query: 236 IVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAYN 295 + RMA EDIGLADPRA +A +A YERLGSPEG+LA Q V+YLA AKSNAGY A+N Sbjct: 273 LTRMAIEDIGLADPRAQSMALEAWDIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFN 332 Query: 296 AARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEEPG 355 A+ ++Q +++VP+HLRNAPT+LMK LGYG EY+Y HD N A +T PD + E Sbjct: 333 VAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENGVALEQTCFPDALGERI 392 Query: 356 WYQPVPRGLEIKIGEKLATLR 376 +YQPV RGLEIK+ EKL LR Sbjct: 393 YYQPVSRGLEIKLKEKLDQLR 413 >ycaJ [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Eco Escherichia coli K12 Length = 447 Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust. Identities = 219/389 (56%), Positives = 268/389 (68%), Gaps = 7/389 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MI WGPPG GKTTLA + A + +SAV SGVK+IR A+E+A QN G+ TILFV Sbjct: 53 MILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFV 112 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNKSQQDA LP+ E G +TFIGATTENPSFE+NSALLSRA+VY+LKSL+ E+++Q Sbjct: 113 DEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQ 172 Query: 121 LLKRA-QDKALG----DLEFDQQATDTIIGYADGDARRFLNLLEQTDTAART--TGTRLV 173 +L +A +DK G D+ + I +GDARR LN LE A +G R++ Sbjct: 173 VLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVL 232 Query: 174 TAEFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLS 233 E L S RFD GD FYD ISALHKSVRGS PDAALYW R++ G DP Y++ Sbjct: 233 KPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 Query: 234 RRIVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNA 293 RR + +A ED+G ADPRAMQ+A A + R+G EGE A+ QA++YLA A KSNA Y A Sbjct: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 Query: 294 YNAARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEE 353 + AA A ++ +VPVHLRNAPTKLMKE+GYG EYRYAHDE NAYAAGE Y P I + Sbjct: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 Query: 354 PGWYQPVPRGLEIKIGEKLATLRQWDEEA 382 +Y P RGLE KIGEKLA L + D+ + Sbjct: 413 TRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 >ECs0977 [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase Ecs Escherichia coli O157:H7 Length = 447 Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust. Identities = 219/389 (56%), Positives = 268/389 (68%), Gaps = 7/389 (1%) Query: 1 MIFWGPPGVGKTTLARLTATAFECEFIALSAVFSGVKDIRAAMEQAEQNLAMGKHTILFV 60 MI WGPPG GKTTLA + A + +SAV SGVK+IR A+E+A QN G+ TILFV Sbjct: 53 MILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFV 112 Query: 61 DEIHRFNKSQQDALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDEELKQ 120 DE+HRFNKSQQDA LP+ E G +TFIGATTENPSFE+NSALLSRA+VY+LKSL+ E+++Q Sbjct: 113 DEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQ 172 Query: 121 LLKRA-QDKALG----DLEFDQQATDTIIGYADGDARRFLNLLEQTDTAART--TGTRLV 173 +L +A +DK G D+ + I +GDARR LN LE A +G R++ Sbjct: 173 VLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVL 232 Query: 174 TAEFLQNALTLNSRRFDKGGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLS 233 E L S RFD GD FYD ISALHKSVRGS PDAALYW R++ G DP Y++ Sbjct: 233 KPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 Query: 234 RRIVRMAWEDIGLADPRAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNA 293 RR + +A ED+G ADPRAMQ+A A + R+G EGE A+ QA++YLA A KSNA Y A Sbjct: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 Query: 294 YNAARAFVKQDKSREVPVHLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPDGIEE 353 + AA A ++ +VPVHLRNAPTKLMKE+GYG EYRYAHDE NAYAAGE Y P I + Sbjct: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 Query: 354 PGWYQPVPRGLEIKIGEKLATLRQWDEEA 382 +Y P RGLE KIGEKLA L + D+ + Sbjct: 413 TRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441