BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0099.p (237 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2340 [M] COG2834 Outer membrane lipoprotein-sorting protein R... 231 1e-60 NMB0622 [M] COG2834 Outer membrane lipoprotein-sorting protein N... 150 2e-36 NMA0830 [M] COG2834 Outer membrane lipoprotein-sorting protein N... 149 6e-36 XF1452 [M] COG2834 Outer membrane lipoprotein-sorting protein Xf... 100 2e-21 PA2614 [M] COG2834 Outer membrane lipoprotein-sorting protein Pa... 95 1e-19 YPO1377 [M] COG2834 Outer membrane lipoprotein-sorting protein Y... 67 5e-11 >RSc2340 [M] COG2834 Outer membrane lipoprotein-sorting protein Rso Ralstonia solanacearum Length = 215 Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 116/218 (53%), Positives = 149/218 (68%), Gaps = 11/218 (5%) Query: 22 RRLMAAGLSALVVAGAITITALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRT-ENG 80 R LMAAGL +++ A + G A A A++Q FVS+ +A+G F QR V+ NG Sbjct: 7 RHLMAAGL--------VSLAAWSAG-AQAGAIEQLNAFVSNVTTARGEFVQRQVKGGANG 57 Query: 81 A-TKVVNTSSGSFVFSRPGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALG 139 + +V TSSG F FSRPG+F+W Y KPYEQ + ADG+ L+IYDKDL+QVT +KL +LG Sbjct: 58 SPLRVAGTSSGDFTFSRPGRFVWRYLKPYEQQLSADGQMLYIYDKDLSQVTERKLDASLG 117 Query: 140 SSPAAILFGSNDLEKNFTLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGLKNGTPVAMELH 199 SSPAAILFGSNDL KNF LKE G KDG++W+E PK+KDT F+R+ IG + G MEL Sbjct: 118 SSPAAILFGSNDLAKNFVLKEGGTKDGIDWVELTPKAKDTQFERVAIGFRAGELEGMELR 177 Query: 200 DSFGQVSLLSFDSFEKNPPLKVNSFSFTIPKGADVFNN 237 D+FG +LL+F +KNP L ++F F PKGADV Sbjct: 178 DAFGNTTLLTFSHIQKNPQLPASAFRFVPPKGADVIKQ 215 >NMB0622 [M] COG2834 Outer membrane lipoprotein-sorting protein Nme Neisseria meningitidis MC58 Length = 207 Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 112/202 (55%), Gaps = 7/202 (3%) Query: 38 ITITALTPGRASA--AALDQFKQFVSSTQSAKGAFTQRMVRTENGATKVVNTSSGSFVFS 95 + + +LT ASA A+D KQF + G+FTQ + + K T+ G+F Sbjct: 11 LAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQTVQ-----SKKKTQTAHGTFKIL 65 Query: 96 RPGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALGSSPAAILFGSNDLEKN 155 RPG F W Y KPY Q I DG+ +++YD DL QVT A+G SPAAIL LE + Sbjct: 66 RPGLFKWEYTKPYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKTALESS 125 Query: 156 FTLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGLKNGTPVAMELHDSFGQVSLLSFDSFEK 215 +TLKE G +G++++ A PK + + I IG K G AM+L DSFG + +SF Sbjct: 126 YTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKGGNLAAMQLKDSFGNQTSISFGGLNT 185 Query: 216 NPPLKVNSFSFTIPKGADVFNN 237 NP L +F FT PKG DV +N Sbjct: 186 NPQLSRGAFKFTPPKGVDVLSN 207 >NMA0830 [M] COG2834 Outer membrane lipoprotein-sorting protein NmA Neisseria meningitidis Z2491 Length = 207 Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 110/201 (54%), Gaps = 5/201 (2%) Query: 37 AITITALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRTENGATKVVNTSSGSFVFSR 96 A+ ++ A A A+D KQF + G+FTQ + + K T+ G+F R Sbjct: 12 AVCSLTVSVASAQAGAVDALKQFNNDADGISGSFTQTVQ-----SKKKTQTAHGTFKILR 66 Query: 97 PGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALGSSPAAILFGSNDLEKNF 156 PG F W Y PY+Q I DG+ +++YD DL QVT A+G SPAAIL LE ++ Sbjct: 67 PGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKTALESSY 126 Query: 157 TLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGLKNGTPVAMELHDSFGQVSLLSFDSFEKN 216 TLKE G +G++++ A PK + + I IG K G AM+L DSFG + +SF N Sbjct: 127 TLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKGGNLAAMQLKDSFGNQTSISFGGLNTN 186 Query: 217 PPLKVNSFSFTIPKGADVFNN 237 P L +F FT PKG DV +N Sbjct: 187 PQLSRGAFKFTPPKGVDVLSN 207 >XF1452 [M] COG2834 Outer membrane lipoprotein-sorting protein Xfa Xylella fastidiosa 9a5c Length = 214 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 5/199 (2%) Query: 41 TALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRTENGATKVVNTSSGSFVFSRPGKF 100 AL G A F ++ +G F+Q ++ T+ +V S+G+ S P Sbjct: 18 VALLSGPVCAGPRADLSAFTRGLKTLQGHFSQEIIDTQG---RVKERSNGTVALSLPNLL 74 Query: 101 IWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALGSSPAAILFGSNDLEKNFTL-K 159 W PY+Q++ ADG++++++D DLNQ + + GN +SP L L+ + + + Sbjct: 75 RWECDAPYKQLVVADGKRVWLFDPDLNQASVRLQGNEERNSPLIALIDPIQLDLKYDVSE 134 Query: 160 EAGDKDGLEWLEAVPK-SKDTTFDRIGIGLKNGTPVAMELHDSFGQVSLLSFDSFEKNPP 218 E +DGL WL P+ + +F G MEL D+ GQ +++ F +++NP Sbjct: 135 EVAMRDGLRWLSLRPRVGIEASFQSASFGFAQTQLARMELVDNLGQRTVIVFSGWQRNPV 194 Query: 219 LKVNSFSFTIPKGADVFNN 237 V++F FT K DV + Sbjct: 195 FAVDTFRFTPGKNVDVIGD 213 >PA2614 [M] COG2834 Outer membrane lipoprotein-sorting protein Pae Pseudomonas aeruginosa Length = 208 Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 9/191 (4%) Query: 50 AAALDQFKQFVSSTQSAKGAFTQRMVRTENGATKVVNTSSGSFVFSRPGKFIWTYQKPYE 109 +AA+ + ++ Q+ F+Q T +G+ + ++G RPG F W P E Sbjct: 24 SAAVQRLTGLLNKAQTLTARFSQL---TLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNE 80 Query: 110 QVIQADGEKLFIYDKDLNQVTTKKLGNALGSSPAAILFGS-NDLEKNF--TLKEAGDKDG 166 Q++ ++GEK+++YD DL QVT +KL L +PA +L G + + ++F T KE G+ Sbjct: 81 QLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITYKEGGN--- 137 Query: 167 LEWLEAVPKSKDTTFDRIGIGLKNGTPVAMELHDSFGQVSLLSFDSFEKNPPLKVNSFSF 226 + PK+KDT FD + + ++G M++ D GQ + + F + N L F+F Sbjct: 138 VVDFVLKPKTKDTLFDTLRLSFRSGKVNDMQMIDGVGQRTNILFFDVKMNEALDAKQFTF 197 Query: 227 TIPKGADVFNN 237 +P G DV Sbjct: 198 DVPPGVDVIQE 208 >YPO1377 [M] COG2834 Outer membrane lipoprotein-sorting protein Ype Yersinia pestis Length = 202 Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%) Query: 22 RRLMAAGLSALVVAGAITITALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRTENGA 81 +RL+ A ++G I+ +AL A A + +S S +F+Q V + +GA Sbjct: 2 KRLLVA---CCFLSGLISASAL------ADASTDLQNRLSKVNSFHASFSQ-AVTSSDGA 51 Query: 82 TKVVNTSSGSFVFSRPGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALGSS 141 VV G RP F W P E V+ +DGE L+ Y+ + Q T L NA G++ Sbjct: 52 --VVQEGEGELWVKRPNLFNWHMTSPDESVLISDGETLWFYNPFVEQATATWLKNATGNT 109 Query: 142 PAAILFGSN-DLEKNFTLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGLK-NGTPVAMELH 199 P ++ +N D K + +K+ GD E PKS + I + +GT + Sbjct: 110 PFMLITRNNPDDWKQYNVKQKGDD-----FELTPKSASGNLKQFAISVTPSGTIKSFTAV 164 Query: 200 DSFGQVSLLSFDSFEKNPPLKVNSFSFTIPKG 231 + GQ S + S +++ + + F+FT PKG Sbjct: 165 EQDGQRSAYTLKS-QQSSVVDASKFTFTPPKG 195