BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0078.p (1068 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1040 [J] COG1530 Ribonucleases G and E Rso Ralstonia solanace... 988 0.0 NMA0071 [J] COG1530 Ribonucleases G and E NmA Neisseria meningit... 773 0.0 NMB0196 [J] COG1530 Ribonucleases G and E Nme Neisseria meningit... 770 0.0 XF2607 [J] COG1530 Ribonucleases G and E Xfa Xylella fastidiosa ... 701 0.0 VC2030 [J] COG1530 Ribonucleases G and E Vch Vibrio cholerae 670 0.0 YPO1590 [J] COG1530 Ribonucleases G and E Ype Yersinia pestis 661 0.0 PM0991 [J] COG1530 Ribonucleases G and E Pmu Pasteurella multocida 654 0.0 Zrne [J] COG1530 Ribonucleases G and E EcZ Escherichia coli O157... 647 0.0 ECs1462 [J] COG1530 Ribonucleases G and E Ecs Escherichia coli O... 647 0.0 rne [J] COG1530 Ribonucleases G and E Eco Escherichia coli K12 646 0.0 >RSc1040 [J] COG1530 Ribonucleases G and E Rso Ralstonia solanacearum Length = 1014 Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/1095 (55%), Positives = 709/1095 (64%), Gaps = 118/1095 (10%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFK G+DVR A I++AL EGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARAYFKNGVDVRTARIQDALAEGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGEDRQELRETM +L +P GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLQVPEGMSIIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLW+A++GA LIY ESSLVIRAIRDYFQPDIGEILIDTDDI+DQA+ FM Sbjct: 184 NYLMQLWKAVDGAAVENKAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQARAFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 + VMPD ++RVK+YRDDVPLFSRFQIEHQIE+AYSR V LPSGGAIVIDHTEALV+VDVN Sbjct: 244 SVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAVDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARAT+G+DIE TA TNLEAADE+ARQLRLRDLGGLIVIDFIDME+SK Q++VE RLKD Sbjct: 304 SARATKGADIEETALRTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL HDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKEN+AAIH Q PV+VAAFLLNEKR +I IETR +V V++IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADT----DIGYSKRQKEDVRPRQEAVVKGITPDQPAPI 536 ER++HDDPRLDD +ASY MAE+A D YS R KE +PRQEA VKGITP+QPAP+ Sbjct: 484 ERLRHDDPRLDDNKASYKMAEEAAKELEADTAYSTR-KEAAKPRQEAAVKGITPEQPAPV 542 Query: 537 VERKAPEPV------AAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKR 590 ++ P AAP + + G + + S F KP PV A APVE A+ Sbjct: 543 SVPRSERPARAEATPAAPQAAAPVPAQGGFVSWLKSLFGGKPAEPVVA-APVETPKRAE- 600 Query: 591 EGERNGRGGDRNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAGEAAEGKQVR 650 +G R RG NR +RG R G+R ER GE++ + + G+ +G Sbjct: 601 DGNRRDRG--------NRQDRGGRT--GQRGER-GERQGQQQAGRDGQRQGQGRDG---- 645 Query: 651 APRPPREPKEGREPREPRELQAQARDGQEVKEARRNEPREAREPREAREPREGREPREGR 710 GR E RE QAQ R+GQ +E +R R+P E E RE Sbjct: 646 ----------GRN--EAREGQAQ-REGQ--REGQRGGRDRNRQPAETAE-------RETV 683 Query: 711 EPRAPRAPRGERKEAKSEEGLPLEAALAAGTAGVAVAAGTAVIASDEAATQVEAAQVEAG 770 E R P+ + +EA+ +G + A Sbjct: 684 EARQPQ----QGQEAREGQGRRERSQERRERA--------------------------PR 713 Query: 771 EAGEGAETAEGATEPRRRRRRGGRNRHRRERD-ENGNLIDNAEAGDSAEGDAAETADAAE 829 E EG E EG EPR R NR RERD + +A A + EG TA A Sbjct: 714 EGREGREPREG-REPRESRD----NREGRERDTQQAKEGASAAAATAVEGLIDPTAAAQV 768 Query: 830 TAEGAEAAIPAFVPVADAAAASAQAAVAQASFAASPVPAAEDAPVAESAAKVESGVNSVE 889 + +PA A+ AA A+ + A+ GV + Sbjct: 769 PQTLLDTTVPAEAITAEVAAPDAEGSGEGEERRRRGRRGRNRYRRDREGAE---GVRTEG 825 Query: 890 AVAAAAAEATEAVFSHQPAIEPVAPSIDASFAPAPVEA-AVQAPAQAPAASEAPVEVVPV 948 + T A +PA+E P+++A+ APV+ V AP Q P + APVE Sbjct: 826 EGESEGEGETAA---GEPAVE-TPPAVEAAQPAAPVQHETVAAPVQ-PVETPAPVETAAP 880 Query: 949 VAAEPVAA-----PAPVV----------QQQISLLDAVEAAPVVASAPAAPAAPAAPAPQ 993 V EPV A PAP + + AA + +A A AP A Sbjct: 881 VVQEPVQAAEAVKPAPTLPAAQPAEPVAAVVAATPPTETAADTIVTALAEVPAPVAST-- 938 Query: 994 AAPAPAQAAGNGAQWDSLQQMLSQAGLTLATTDPVKLRAAQEAAAAFVPAPRVPRERKPL 1053 A APA G +LQ +++ AG+T TD KL+AA+E AA V PRVPRERKPL Sbjct: 939 VAKAPALPIG------TLQAVVADAGMTWVHTDEQKLQAAKEDAARTVTPPRVPRERKPL 992 Query: 1054 PPQSTEPLVQVETRR 1068 PP P+V VET R Sbjct: 993 PPIQQGPMVLVETSR 1007 >NMA0071 [J] COG1530 Ribonucleases G and E NmA Neisseria meningitidis Z2491 Length = 919 Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/538 (67%), Positives = 442/538 (82%), Gaps = 7/538 (1%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQ EELRVAIVDGQ L+D+DIET G+EQRK NIYKG+ITRIEPSLEACFV+YG + Sbjct: 4 MLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDYGTD 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEV+RSYF++ R A I++ L+EG E+IVQVEK+ERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVSRSYFQDYEGGR-ARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISLAG 122 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGE+RQEL+ M +LD+PNGMS+IARTAGIGR+ +EL+WDL Sbjct: 123 RYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPNGMSIIARTAGIGRSAEELEWDL 182 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYL QLW+AIE AG++ +L++ ESSL+IRAIRDYF+PDIGEIL+D +++DQ +FM Sbjct: 183 NYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAEFM 242 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 ++VMP + R+K Y D PLFSRFQIEHQIE+A+SR+V LPSGGAIVIDHTEALVS+DVN Sbjct: 243 SYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSIDVN 302 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARATRG+DIE TAF TN+EAA+EVARQ+RLRDLGGL+VIDFIDMEN K+QR+VE L+D Sbjct: 303 SARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVLRD 362 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL DRARVQMGK+SRFGL+ELSRQRL+P+L E SHV CPRC GTG IR ES+AL VLR Sbjct: 363 ALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHVLR 422 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMK+N+ +H Q PVDVA FLLNEKR E+ +E R V V++IPN HLE PHY++ Sbjct: 423 IIQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHYEI 482 Query: 481 ERIKHDDPRLDDAQASYTMA---EQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAP 535 RI+ DD +D + SY E+ ++ + + + RP E VKG+ PAP Sbjct: 483 NRIRTDDVE-EDGEPSYKRVAEPEENESAKPFGGEKAKAARP--EPAVKGVRHTSPAP 537 >NMB0196 [J] COG1530 Ribonucleases G and E Nme Neisseria meningitidis MC58 Length = 919 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/538 (67%), Positives = 440/538 (81%), Gaps = 7/538 (1%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQ EELRVAIVDGQ L+D+DIET G+EQRK NIYKG+ITRIEPSLEACFV+YG + Sbjct: 4 MLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDYGTD 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEV+RSYF++ R A I++ L+EG E+IVQVEK+ERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVSRSYFQDYEGGR-ARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISLAG 122 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGE+RQEL+ M +LD+PNGMS+IARTAGIGR+ +EL+WDL Sbjct: 123 RYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEWDL 182 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYL QLW+AIE AG++ +L++ ESSL+IRAIRDYF+PDIGEIL+D +++DQ +FM Sbjct: 183 NYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAEFM 242 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 ++VMP + R+K Y D PLFSRFQIEHQIE+A+SR+V LPSGGAIVIDHTEALVS+DVN Sbjct: 243 SYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSIDVN 302 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARATRG+DIE TAF TN+EAA+EVARQ+RLRDLGGL+VIDFIDMEN K+QR+VE L+D Sbjct: 303 SARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVLRD 362 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL DRARVQMGK+SRFGL+ELSRQRL+P+L E SHV CPRC GTG IR ES+AL VLR Sbjct: 363 ALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHVLR 422 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMK+N+ + Q PVDVA FLLNEKR E+ +E R V V++IPN HLE PHY++ Sbjct: 423 IIQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHYEI 482 Query: 481 ERIKHDDPRLDDAQASYTMAEQADTDIG---YSKRQKEDVRPRQEAVVKGITPDQPAP 535 RI+ DD +D + SY + + D + + + RP E VKG+ PAP Sbjct: 483 NRIRTDDVE-EDGEPSYKRVAEPEEDESAKPFGGEKAKAARP--EPAVKGVRHTSPAP 537 >XF2607 [J] COG1530 Ribonucleases G and E Xfa Xylella fastidiosa 9a5c Length = 1132 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/607 (55%), Positives = 443/607 (72%), Gaps = 11/607 (1%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQ EELRVAIVDGQ L DIDIE +EQ+KSNIYKG ITR+EPSLEA FV+YG + Sbjct: 4 MLINATQAEELRVAIVDGQSLYDIDIEQPSKEQKKSNIYKGRITRLEPSLEAAFVDYGTD 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLP KE+++ YF+ G+D A I+E LREGQEI+VQV+KEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPLKEISKDYFQAGLDHHKAGIRELLREGQEIVVQVDKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RY+VLMPN+P GGVSRR+EGEDR L+E ++KL++PN M VI RTAG+GR+ ELQWDL Sbjct: 124 RYMVLMPNSPSAGGVSRRIEGEDRAALKEALEKLNIPNDMGVIIRTAGVGRDTQELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 ++L+ WRAI A S LIYQES L+IRA+RDYF+ DIGEIL+DT++++ A +FM Sbjct: 184 DFLLHAWRAIAEAALSKPAPLLIYQESRLIIRALRDYFRADIGEILVDTEEMYQDAHEFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 HVMP + ++K Y+DD+PLF+RFQIE QIE AY R V LPSGG+IV+D TEAL ++DVN Sbjct: 244 RHVMPQSLRKLKYYKDDIPLFNRFQIESQIEGAYERNVRLPSGGSIVVDQTEALTAIDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 S+RAT+G+DIE TAF TNLEAADE+ARQLRLRD+GGL+VIDFIDM +SK+QRE+E RL++ Sbjct: 304 SSRATKGNDIEETAFQTNLEAADEIARQLRLRDVGGLVVIDFIDMSSSKHQREIETRLQN 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 L +DRARVQ+ +ISRFGL+E+SRQRLRPSL E S + CP C+G G +R ES +L ++R Sbjct: 364 CLKYDRARVQLSRISRFGLLEMSRQRLRPSLGESSQIVCPYCDGHGRMRSIESLSLSIIR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 I++E AMKEN+ + VQ PV++A +LLNEKR I +IE RH +I+I ++ L TPHY++ Sbjct: 424 IVEEHAMKENTGQVLVQTPVEIANYLLNEKRRAINEIEKRHDAPIIIIADEQLHTPHYEV 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPIVER- 539 R++ ++ + + SY + + + ++ P VK I P Q AP E Sbjct: 484 TRLRENELSEETGKPSYQRNTPRKLPVHALTKSQLNIPP--APAVKSIPPPQLAPTQENI 541 Query: 540 -----KAPEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAA-PAPVEAKAPAK-REG 592 ++ E A P+ P ++ + L +IF K+ A ++ PAP++ + Sbjct: 542 PTIREQSAENRAHPI-PELVSSLASWLKRIFGNTDKRQTASNSSHPAPLQQNRNGNVQRN 600 Query: 593 ERNGRGG 599 ERN R G Sbjct: 601 ERNHRDG 607 >VC2030 [J] COG1530 Ribonucleases G and E Vch Vibrio cholerae Length = 1052 Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/727 (49%), Positives = 480/727 (66%), Gaps = 55/727 (7%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQ+EELRVA+VDGQ+L D+DIE+ G E +K+NIYKG ITRIEPSLEA FV+YG E Sbjct: 4 MLINATQKEELRVALVDGQRLFDLDIESPGHESKKANIYKGRITRIEPSLEAAFVDYGAE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRN-ASIKEALREGQEIIVQVEKEERGNKGAALTSFISLA 119 RHGFLP KE+AR YF +G + +IK+ L EGQE+IVQ+EKEERG+KGAALT+FISLA Sbjct: 64 RHGFLPLKEIAREYFPDGYSYQGRPNIKDVLNEGQEVIVQIEKEERGSKGAALTTFISLA 123 Query: 120 GRYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWD 179 G YLVLMPNNPR GG+SRR+EG++R EL+ + L+LP GM +I RTAG+G++ +EL+WD Sbjct: 124 GSYLVLMPNNPRAGGISRRIEGDERTELKSALSSLELPQGMGLIVRTAGVGKSAEELEWD 183 Query: 180 LNYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQF 239 LN L++ W AI+ A S FLI+QES++++RAIRDY + DIGEILID++ I+++A + Sbjct: 184 LNVLLKHWSAIKQASDSNPAPFLIHQESNVIVRAIRDYLRRDIGEILIDSNSIYERALEH 243 Query: 240 MAHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDV 299 + V PD V+RVK+Y +VPLFS FQIE QIE+A+ R V LPSGG+IVID TEAL S+D+ Sbjct: 244 IRLVRPDFVNRVKKYEGEVPLFSHFQIESQIESAFQREVRLPSGGSIVIDPTEALTSIDI 303 Query: 300 NSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLK 359 NSARAT+G DIE TA NTNLEAADE+ARQLRLRDLGGL+VIDFIDM ++QREVE RL+ Sbjct: 304 NSARATKGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVENRLR 363 Query: 360 DALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVL 419 +A+ DRARVQ+G+ISRFGL+E+SRQRL PSL+E SH CPRC GTG IRD ES AL VL Sbjct: 364 EAVRVDRARVQIGRISRFGLLEMSRQRLSPSLAEASHHICPRCKGTGVIRDNESLALSVL 423 Query: 420 RIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYK 479 R+I+EEA+K+N++ + PV +A++LLNEKR I IE +V + ++PN +ETPH++ Sbjct: 424 RLIEEEALKDNTSQVLAVVPVSIASYLLNEKRRSINHIEKAQQVRITIVPNSDMETPHFE 483 Query: 480 MERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDV--RPR--QEAVVKGITPDQPAP 535 + R++ + + SY + ++ + ++ DV +P+ +E V+KG A Sbjct: 484 VIRVREGE---EQDVLSYLIPKKLEAMKEAEGKEVVDVELKPKRIEEPVLKGFAAPAEAV 540 Query: 536 IVERKAPEPVAAPVPPPTLAPESGLLGKIF----SFFRKKP-VAPVAAPAPVEAKAPA-- 588 P+ PV + G ++F S F P A V AP ++ Sbjct: 541 PAPTPKPKAEPQPVAEVQQPAQPGFFSRVFKAIASLFSATPEAAKVEAPVTQNSEQDKPR 600 Query: 589 -------------------KREGERNGRGGDRNGRNRNRN--ERGDRAERGERAERNG-- 625 +R E N D+ N NR ER + ERGER ERN Sbjct: 601 RERNDRNNDRRRNPRDKNRRRGNEENNERNDKETSNSNRKPQERKPKQERGERNERNDRN 660 Query: 626 -----------EQRNGRNPA--AAELKAGE--AAEGKQVRAPRPPREPKEG--REPREPR 668 ++RN R+ + A L+ G AAE +Q P+E K +E R+ R Sbjct: 661 ERPETERPERQDRRNKRDESKTAKLLEQGRQLAAEAQQEVKAVEPKEEKAAVVKERRQRR 720 Query: 669 ELQAQAR 675 +L Q R Sbjct: 721 KLSKQIR 727 >YPO1590 [J] COG1530 Ribonucleases G and E Ype Yersinia pestis Length = 1221 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/674 (50%), Positives = 448/674 (66%), Gaps = 57/674 (8%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQQEELRVA+VDGQ+L D+DIE+ G EQ+K+NIYKG ITRIEPSLEA FV+YG E Sbjct: 4 MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRN-ASIKEALREGQEIIVQVEKEERGNKGAALTSFISLA 119 RHGFLP KE++R YF +IK+ LREGQE+IVQV+KEERGNKGAALT+FISLA Sbjct: 64 RHGFLPLKEISREYFPNNYSSHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFISLA 123 Query: 120 GRYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWD 179 G YLVLMPNNPR GG+SRR+EG+DR EL+E + L LP+GM +I RTAG+G++ D LQWD Sbjct: 124 GSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLQLPDGMGLIVRTAGVGKSADALQWD 183 Query: 180 LNYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQF 239 L++ ++ W AI+ A + FLI+QES++++RA RDY +PDIGEILID + + A++ Sbjct: 184 LSFRLKHWDAIKKAAEGRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKVLELAKEH 243 Query: 240 MAHV-MPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVD 298 +A + PD ++K Y ++PLFS +QIE QIE+A+ R V LPSGG+IVID TEAL ++D Sbjct: 244 IAALGRPDFSSKIKLYSGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALTAID 303 Query: 299 VNSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRL 358 +NSARATRG DIE TAFNTNLEAADE+ARQLRLRDLGGLIVIDFIDM ++QREVE RL Sbjct: 304 INSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVENRL 363 Query: 359 KDALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQV 418 +DA+ DRAR+Q+G+ISRFGL+E+SRQRL PSL E SH CPRC+GTG +RD ES +L + Sbjct: 364 RDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI 423 Query: 419 LRIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRH-RVTVIMIPNKHLETPH 477 LR+I+EEA+KEN+ +H PV +A++LLNEKR + IE R V +++PN ++TPH Sbjct: 424 LRLIEEEALKENTHEVHAIVPVQIASYLLNEKRESVNAIEKRQGGVRAVIVPNDQMQTPH 483 Query: 478 YKMERIKHDD--PRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQP-- 533 Y + R++ + P L SY + + + ++ +P +EA ++ P+QP Sbjct: 484 YSVLRVRKGEEVPSL-----SYLLPQLHEAEMA---------QPLEEATIERKRPEQPAL 529 Query: 534 -------------APIVERKAPEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAA-- 578 AP V + P VA P T + G ++FS + A A Sbjct: 530 ATFSLPTEVPPEEAPTVAKAKP-AVATPAAVSTDVEQPGFFSRLFSGLKNMFGASAEAEV 588 Query: 579 -PAPV--------------EAKAPAKREGERNGR----GGDRNGR-NRNRNERGDRAERG 618 PA V + ERN R G D + R N NR+ Sbjct: 589 QPAEVVKTDTSENRRNDRRNPRRQNNGRKERNDRTPREGRDNSSRDNTNRDNTNRDNTSR 648 Query: 619 ERAERNGEQRNGRN 632 + A R+G R+ N Sbjct: 649 DNANRDGANRDNSN 662 >PM0991 [J] COG1530 Ribonucleases G and E Pmu Pasteurella multocida Length = 1004 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/587 (54%), Positives = 425/587 (72%), Gaps = 26/587 (4%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQ+EELRVA+VDGQ+L D+DIE+ G EQ+K+NIYKG ITR+EPSLEA FV+YG E Sbjct: 4 MLINATQKEELRVALVDGQRLFDLDIESPGHEQKKANIYKGRITRVEPSLEAAFVDYGAE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNA-SIKEALREGQEIIVQVEKEERGNKGAALTSFISLA 119 RHGFLP KE+AR YF + + +I++ L EGQE+IVQV KEERGNKGAALT+F+SLA Sbjct: 64 RHGFLPLKEIAREYFPDDYVYQGRPNIRDILSEGQEVIVQVNKEERGNKGAALTTFVSLA 123 Query: 120 GRYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWD 179 G YLV+MPNNPR GG+SRR+EG++R EL++ + L++P+G+ +I RTAG+G++ +ELQWD Sbjct: 124 GSYLVIMPNNPRAGGISRRIEGDERLELKDALSSLEVPDGVGLIVRTAGVGKSPEELQWD 183 Query: 180 LNYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQF 239 L L+ W AI+ A QS FLI+QES +++RAIRDY + DIGEILID+ ++++A+ Sbjct: 184 LKVLLHHWEAIKQASQSRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDSPKVYEKAKAH 243 Query: 240 MAHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDV 299 + V PD +HRVK Y+ +VPLFS +QIE QIE+A+ R V LPSGG+IVID TEAL ++D+ Sbjct: 244 IKLVRPDFIHRVKLYQGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTAIDI 303 Query: 300 NSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLK 359 NS+R+TRG DIE TA NTNLEAADE+ARQLRLRDLGGLIVIDFIDM ++QREVE R++ Sbjct: 304 NSSRSTRGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVENRIR 363 Query: 360 DALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVL 419 DA+ DRAR+Q+ +ISRFGL+E+SRQRL PSL E SH CPRC GTG IRD ES +L +L Sbjct: 364 DAVRQDRARIQISRISRFGLLEMSRQRLSPSLGESSHHVCPRCQGTGKIRDNESLSLSIL 423 Query: 420 RIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYK 479 R+I+EEA+KEN+ +H PV++A++LLNEKR I IE RH V VI++PN+ +ETPH+ Sbjct: 424 RLIEEEALKENTKQVHTLVPVEIASYLLNEKRRAIHSIEKRHDVDVIVVPNEGMETPHFG 483 Query: 480 MERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPIVER 539 + R++ + + + SY + + + + E P + V + I + A + Sbjct: 484 VFRVREGE---EVHELSYNL-------VKLHQEKDEHFVPEESLVSRNI---ETAALTSE 530 Query: 540 KAPE--------PVAAPVPPPTLAPESGLLGKIF----SFFRKKPVA 574 E P APVP + + LL +I + F KPV Sbjct: 531 NVLESAAVSMAIPAPAPVPEKKVENKPSLLTRILAKLKAIFADKPVV 577 >Zrne [J] COG1530 Ribonucleases G and E EcZ Escherichia coli O157:H7 EDL933 Length = 1061 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/536 (57%), Positives = 401/536 (74%), Gaps = 8/536 (1%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQQEELRVA+VDGQ+L D+DIE+ G EQ+K+NIYKG ITRIEPSLEA FV+YG E Sbjct: 4 MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRN-ASIKEALREGQEIIVQVEKEERGNKGAALTSFISLA 119 RHGFLP KE+AR YF +IK+ LREGQE+IVQ++KEERGNKGAALT+FISLA Sbjct: 64 RHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLA 123 Query: 120 GRYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWD 179 G YLVLMPNNPR GG+SRR+EG+DR EL+E + L+LP GM +I RTAG+G++ + LQWD Sbjct: 124 GSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWD 183 Query: 180 LNYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQF 239 L++ ++ W AI+ A +S FLI+QES++++RA RDY + DIGEILID + + A+Q Sbjct: 184 LSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQH 243 Query: 240 MAHV-MPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVD 298 +A + PD ++K Y ++PLFS +QIE QIE+A+ R V LPSGG+IVID TEAL ++D Sbjct: 244 IAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAID 303 Query: 299 VNSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRL 358 +NSARATRG DIE TAFNTNLEAADE+ARQLRLRDLGGLIVIDFIDM ++QR VE RL Sbjct: 304 INSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRL 363 Query: 359 KDALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQV 418 ++A+ DRAR+Q+ ISRFGL+E+SRQRL PSL E SH CPRC+GTG +RD ES +L + Sbjct: 364 REAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI 423 Query: 419 LRIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHR-VTVIMIPNKHLETPH 477 LR+I+EEA+KEN+ +H PV +A++LLNEKR + IETR V +++PN +ETPH Sbjct: 424 LRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPH 483 Query: 478 YKMERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQK--EDVRPRQEAVVKGITPD 531 Y + R++ + + SY + + + + ++ E RP Q A+ PD Sbjct: 484 YHVLRVRKGE---ETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPD 536 >ECs1462 [J] COG1530 Ribonucleases G and E Ecs Escherichia coli O157:H7 Length = 1061 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/536 (57%), Positives = 401/536 (74%), Gaps = 8/536 (1%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQQEELRVA+VDGQ+L D+DIE+ G EQ+K+NIYKG ITRIEPSLEA FV+YG E Sbjct: 4 MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRN-ASIKEALREGQEIIVQVEKEERGNKGAALTSFISLA 119 RHGFLP KE+AR YF +IK+ LREGQE+IVQ++KEERGNKGAALT+FISLA Sbjct: 64 RHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLA 123 Query: 120 GRYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWD 179 G YLVLMPNNPR GG+SRR+EG+DR EL+E + L+LP GM +I RTAG+G++ + LQWD Sbjct: 124 GSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWD 183 Query: 180 LNYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQF 239 L++ ++ W AI+ A +S FLI+QES++++RA RDY + DIGEILID + + A+Q Sbjct: 184 LSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQH 243 Query: 240 MAHV-MPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVD 298 +A + PD ++K Y ++PLFS +QIE QIE+A+ R V LPSGG+IVID TEAL ++D Sbjct: 244 IAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAID 303 Query: 299 VNSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRL 358 +NSARATRG DIE TAFNTNLEAADE+ARQLRLRDLGGLIVIDFIDM ++QR VE RL Sbjct: 304 INSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRL 363 Query: 359 KDALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQV 418 ++A+ DRAR+Q+ ISRFGL+E+SRQRL PSL E SH CPRC+GTG +RD ES +L + Sbjct: 364 REAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI 423 Query: 419 LRIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHR-VTVIMIPNKHLETPH 477 LR+I+EEA+KEN+ +H PV +A++LLNEKR + IETR V +++PN +ETPH Sbjct: 424 LRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPH 483 Query: 478 YKMERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQK--EDVRPRQEAVVKGITPD 531 Y + R++ + + SY + + + + ++ E RP Q A+ PD Sbjct: 484 YHVLRVRKGE---ETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPD 536 >rne [J] COG1530 Ribonucleases G and E Eco Escherichia coli K12 Length = 1061 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/536 (57%), Positives = 401/536 (74%), Gaps = 8/536 (1%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 ML NATQQEELRVA+VDGQ+L D+DIE+ G EQ+K+NIYKG ITRIEPSLEA FV+YG E Sbjct: 4 MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRN-ASIKEALREGQEIIVQVEKEERGNKGAALTSFISLA 119 RHGFLP KE+AR YF +IK+ LREGQE+IVQ++KEERGNKGAALT+FISLA Sbjct: 64 RHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLA 123 Query: 120 GRYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWD 179 G YLVLMPNNPR GG+SRR+EG+DR EL+E + L+LP GM +I RTAG+G++ + LQWD Sbjct: 124 GSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWD 183 Query: 180 LNYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQF 239 L++ ++ W AI+ A +S FLI+QES++++RA RDY + DIGEILID + + A+Q Sbjct: 184 LSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQH 243 Query: 240 MAHV-MPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVD 298 +A + PD ++K Y ++PLFS +QIE QIE+A+ R V LPSGG+IVID TEAL ++D Sbjct: 244 IAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAID 303 Query: 299 VNSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRL 358 +NSARATRG DIE TAFNTNLEAADE+ARQLRLRDLGGLIVIDFIDM ++QR VE RL Sbjct: 304 INSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRL 363 Query: 359 KDALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQV 418 ++A+ DRAR+Q+ ISRFGL+E+SRQRL PSL E SH CPRC+GTG +RD ES +L + Sbjct: 364 REAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI 423 Query: 419 LRIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHR-VTVIMIPNKHLETPH 477 LR+I+EEA+KEN+ +H PV +A++LLNEKR + IETR V +++PN +ETPH Sbjct: 424 LRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPH 483 Query: 478 YKMERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQK--EDVRPRQEAVVKGITPD 531 Y + R++ + + SY + + + + ++ E RP Q A+ PD Sbjct: 484 YHVLRVRKGE---ETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPD 536