BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0013.p (256 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl1733 [K] COG0583 Transcriptional regulator Atu Agrobacterium ... 235 7e-62 mlr5687 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 228 1e-59 AGl2011 [K] COG0583 Transcriptional regulator Atu Agrobacterium ... 186 4e-47 AGl1696 [K] COG0583 Transcriptional regulator Atu Agrobacterium ... 162 8e-40 AGc1163 [K] COG0583 Transcriptional regulator Atu Agrobacterium ... 117 3e-26 SMc00820 [K] COG0583 Transcriptional regulator Sme Sinorhizobium... 117 4e-26 mlr2751 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 112 7e-25 PA2846 [K] COG0583 Transcriptional regulator Pae Pseudomonas aer... 112 1e-24 mll6897 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 107 2e-23 BMEII0526 [K] COG0583 Transcriptional regulator Bme Brucella mel... 106 5e-23 >AGl1733 [K] COG0583 Transcriptional regulator Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 293 Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 127/232 (54%), Positives = 161/232 (69%) Query: 5 LDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVRLSAE 64 LD++AV+AFV ADL SFTRAAE L +TQ AIS+KLK+LE RLG+RLLERTPR VRLSA+ Sbjct: 7 LDVEAVEAFVTIADLQSFTRAAETLGTTQGAISVKLKRLEDRLGQRLLERTPRSVRLSAQ 66 Query: 65 GQQFLPAARELLAAHERALEQLDQGPVRFSVGISDHVAGASLPRALAQVHALDPGVVVEV 124 G FL ARE LAAH+RAL L RF +GI+ HVAG +P LA+++ DPG+ +EV Sbjct: 67 GAVFLAPAREFLAAHDRALAGLSSPRRRFGLGIAAHVAGPEVPTLLARLNDHDPGLTIEV 126 Query: 125 RVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAGGALRVATF 184 R+ S L+ ++RGE+DA I+RRE R G+++ E GW+A P + G LR+A Sbjct: 127 RMDHSRSLLDAFDRGEIDAAIIRREDDRRDGEVLGPEHFGWYATPQFEHRQGEPLRLAAL 186 Query: 185 SQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAP 236 S AC +R ++ LDAA IAW EVF+GG V AAVSAGLA+SA R AP Sbjct: 187 SPACGVRNIATHALDAAAIAWTEVFLGGTSSMVTAAVSAGLAISAFSCRLAP 238 >mlr5687 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 302 Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/232 (53%), Positives = 160/232 (68%) Query: 5 LDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVRLSAE 64 LD+DAV+AFV A+L SFTRAAEAL STQ AIS+KLK+LE R+G+RL+ERTPR VRLSA Sbjct: 3 LDVDAVKAFVAVAELRSFTRAAEALGSTQGAISVKLKRLEDRMGQRLIERTPRLVRLSAR 62 Query: 65 GQQFLPAARELLAAHERALEQLDQGPVRFSVGISDHVAGASLPRALAQVHALDPGVVVEV 124 G FL ARELLAAH+RA+ L F +GI+ HV GA +P LA+++A DP + +EV Sbjct: 63 GAVFLDPARELLAAHDRAVASLAAVRRHFRLGIATHVGGAEVPTLLARLNAHDPALTIEV 122 Query: 125 RVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAGGALRVATF 184 R+ + +L+ ++RG+LDA IVRRE R G+++ E GW+A PD AG LR+A Sbjct: 123 RLDDTRELIAAFDRGDLDAAIVRREDDRRDGEVLAPEHFGWYATPDFVYRAGEPLRLAAS 182 Query: 185 SQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAP 236 + +C IR++ LDA GI W +VF+G G AV AVSAGLAV A R P Sbjct: 183 APSCSIRDVITGTLDAVGIPWTQVFLGCGSFAVAEAVSAGLAVGAFSSRLVP 234 >AGl2011 [K] COG0583 Transcriptional regulator Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 283 Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 150/235 (63%), Gaps = 1/235 (0%) Query: 3 KPLDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVRLS 62 + LD +AV+AF+L A+L SFT+ A + ++Q+AISL+L++LE LG RL+ERTPR+VRL+ Sbjct: 5 RSLDPEAVEAFLLVAELQSFTQVAGVMNTSQAAISLRLRRLEDMLGHRLVERTPRRVRLT 64 Query: 63 AEGQQFLPAARELLAAHERALEQLDQGPVRFSVGISDHVAGASLPRALAQVHALDPGVVV 122 A G++FL AR +AA RAL+ Q P R ++G++ H+ GA LPR L V V + Sbjct: 65 AAGERFLEPARAYVAAGRRALDVFGQEPTRLAIGVTHHLIGADLPRILRVVSERVTSVTL 124 Query: 123 EVRVASSHDLMPLYERGELDAVIV-RREPQDRGGKLVMEERIGWFAHPDAQCWAGGALRV 181 +R A + L+ LY+ GELDA++V R + R G+ + +E GW+ D + + + Sbjct: 125 HLRTAGTRTLLELYDAGELDAIVVLRHDDIRRDGEPLFQESFGWYGSADFDLRSDVPVPL 184 Query: 182 ATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAP 236 + C +R ++LR L++A IAW EVFVG G AVGAAV AG+ V L +AP Sbjct: 185 VLQPEPCNLRAMALRALESADIAWREVFVGTGATAVGAAVEAGIGVGLLAQSAAP 239 >AGl1696 [K] COG0583 Transcriptional regulator Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 280 Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 92/237 (38%), Positives = 140/237 (59%), Gaps = 1/237 (0%) Query: 5 LDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVRLSAE 64 +DL++V+ F+L+ +L S TRAAEA + Q +S KLK LEQRLGRRL++R+PR +RL+ + Sbjct: 2 IDLESVRLFILSVELGSLTRAAEAAGTVQPVVSQKLKMLEQRLGRRLIDRSPRHLRLTED 61 Query: 65 GQQFLPAARELLAAHERALEQLDQGPVRFSVGISDHVAGASLPRALAQVHALDP-GVVVE 123 GQ FLP ARELLA HE AL D+ P+ F++ SDH G+ L A+ + A P V++ Sbjct: 62 GQVFLPKARELLAKHEDALNFSDEPPLHFALAASDHAIGSRLSAAIRAMRASLPANAVID 121 Query: 124 VRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAGGALRVAT 183 V + S + + G DA I+RR G+++ +R+GW PD + A A+ + + Sbjct: 122 VTLGFSRQVKESFASGLADAAIIRRNGGGSDGEVLRTDRLGWRVAPDWRPRANSAVPLVS 181 Query: 184 FSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAPGXKN 240 C +R++++ L AG+ W + F G A+ V AG ++AL SA G + Sbjct: 182 LGPGCGVRDIAISELGKAGVVWRDAFTAGSCSALLEGVHAGAGIAALGDISARGLPD 238 >AGc1163 [K] COG0583 Transcriptional regulator Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 316 Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 6/234 (2%) Query: 1 MEKPLDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVR 60 M PLD+D + F+ D SFT+AA+ + TQSA+S+++++LE+R+G++L + R R Sbjct: 1 MSAPLDIDQLHTFIAIIDTGSFTKAADRVFKTQSAVSMQMRRLEERIGKQLFAKDGRGNR 60 Query: 61 LSAEGQQFLPAARELLAAHERALEQLD----QGPVRFSVGISDHVAGASLPRALAQVHAL 116 L+AEG++ + AR ++ + A+ D +G +R +G D A +P + + Sbjct: 61 LTAEGEKLMNYARRIIRLNNEAIAAFDDNRLEGTLR--IGTPDDYADRYMPEIIGRFAKT 118 Query: 117 DPGVVVEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAG 176 P V + + S L RGELD +V P+ R +V E + W A + Sbjct: 119 HPNVELYIVCEPSVSLAEKMARGELDIALVTHNPRARSSDVVRTEPLCWVASANHPLKDD 178 Query: 177 GALRVATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSAL 230 + +A + C R+L+ LDA G + +F V AAV AG+AVS L Sbjct: 179 APVPLAVGRRDCHWRQLACSALDADGRDYQVLFTSWSSTVVAAAVLAGMAVSVL 232 >SMc00820 [K] COG0583 Transcriptional regulator Sme Sinorhizobium meliloti Length = 316 Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 6/234 (2%) Query: 1 MEKPLDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVR 60 M PLD+D +Q FV AD SFT+AA+ + TQSA+S+++++LE+R+G+ L + R R Sbjct: 1 MSAPLDIDQLQTFVAIADTGSFTKAADRVFKTQSAVSMQMRRLEERIGKPLFMKDGRGNR 60 Query: 61 LSAEGQQFLPAARELLAAHERALEQLD----QGPVRFSVGISDHVAGASLPRALAQVHAL 116 L+ EG + L AR ++ + A+ D +G +R +G D A +P + + Sbjct: 61 LTVEGDRLLNFARRMIRLNNEAIASFDDNRLEGTLR--IGTPDDYADRYMPEIIVRFAKT 118 Query: 117 DPGVVVEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAG 176 P V + + S DL +G+LD +V P+ R +V E + W + + Sbjct: 119 HPNVELYIICEPSVDLAEKMAKGDLDIALVTHNPRARASDVVRTEPLCWVSSINHPLPEN 178 Query: 177 GALRVATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSAL 230 + +A + C+ R+ + LDA G + +F V AAV AG+AVS L Sbjct: 179 APIPLAVGRRDCQWRQAACAALDATGKEYQILFTSWSSTVVAAAVLAGMAVSVL 232 >mlr2751 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 285 Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 7/253 (2%) Query: 1 MEKPLDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVR 60 M PLDL+ ++ FV + S + AA + +QSA+S+++++LE+ +G +LL R PR V Sbjct: 1 MAAPLDLNLLKTFVAVVESGSLSNAAPRVGRSQSAVSMQMQRLEEMVGNQLLVRGPRTVT 60 Query: 61 LSAEGQQFLPAARELLAAHERALEQL----DQGPVRFSVGISDHVAGASLPRALAQVHAL 116 +A G+ FL AR LL + A + + G VR G+ D A LP L++ Sbjct: 61 PNAIGEDFLIYARRLLKLSDEAWASVTRPKETGSVRL--GVPDDYAAFLLPPVLSRFAED 118 Query: 117 DPGVVVEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAG 176 P V VE+ S L+ G LD IV R P D+ ++ ER W A P+ W Sbjct: 119 HPLVTVELICEQSTALVKTLAEGRLDLAIVTRLP-DQPLDVIRLERFVWVASPNHVAWQT 177 Query: 177 GALRVATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAP 236 L VA F C R L+ L A ++ + +L + A V AGLAV+ L RS P Sbjct: 178 DPLPVALFEPGCAARMNVLQALGEADRSYRCTYSSASLLGLIAVVQAGLAVAGLAQRSVP 237 Query: 237 GXKNLLKTQKRIP 249 ++ + +P Sbjct: 238 PSLRIIGGNEGLP 250 >PA2846 [K] COG0583 Transcriptional regulator Pae Pseudomonas aeruginosa Length = 284 Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 125/250 (50%), Gaps = 10/250 (4%) Query: 5 LDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQR-LGRRLLERTPRQVRLSA 63 +D + ++ FV A+ FTRAAEAL TQSA+S+++K+LE+ L R L ER RQ RL+A Sbjct: 7 IDTELLRTFVAIAEHGGFTRAAEALNRTQSAVSMQMKRLEEDVLQRSLFERDGRQTRLTA 66 Query: 64 EGQQFLPAARELLAAHERALEQLDQ----GPVRFSVGISDHVAGASLPRALAQVHALDPG 119 EGQ L AR +L H L + G VR +G D LP L++ P Sbjct: 67 EGQVLLGYARRILKLHGEVFNTLRRPHMVGSVR--IGTPDDYVMRFLPAILSRFAEAYPL 124 Query: 120 VVVEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAGGAL 179 V VEV +S +L+ R +LD IV REP G+L+ +E W A + Sbjct: 125 VQVEVHCDTSLNLL---ARNDLDLSIVTREPGTEIGQLLRQEPFVWMAAEGFCPHDQRPI 181 Query: 180 RVATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAPGXK 239 +A F+ C R + L+AA + + + + A+ A VSAGLAV+ L G Sbjct: 182 PLAMFNTTCFCRAWACNALEAAELDYRIAYSSPSLSALFAVVSAGLAVTVQLRSLLTGNL 241 Query: 240 NLLKTQKRIP 249 +L + +P Sbjct: 242 RILDESEGLP 251 >mll6897 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 320 Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 6/234 (2%) Query: 1 MEKPLDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVR 60 M+ PLDLD +Q F+ AD SFTRAAE + TQSA+S+++++LE+R+G+ L E+ R R Sbjct: 3 MKAPLDLDQLQTFISIADTGSFTRAAEEVHRTQSAVSMQMRRLEERIGKPLFEKEGRSNR 62 Query: 61 LSAEGQQFLPAARELLAAHERALEQLD----QGPVRFSVGISDHVAGASLPRALAQVHAL 116 L+ EG + L AR LL + L D +G +R +G D A LP +A+ Sbjct: 63 LTEEGDKLLSYARRLLYLNRETLAAFDDQRLEGTIR--IGTPDDYADRFLPEIMARFTRS 120 Query: 117 DPGVVVEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAG 176 +P V + V + L+ +RG LD +V ++V E + W + Sbjct: 121 NPRVELTVICEPTPGLVEHIKRGNLDLALVTHNDVRGQSEVVRREPLLWVTSANHATHEE 180 Query: 177 GALRVATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSAL 230 L +A C R ++ LD + +F + AAV +GLA+S L Sbjct: 181 ETLPMAFGRPNCIWRRAAVDVLDQQNRDYRILFTSFSATVITAAVLSGLAISVL 234 >BMEII0526 [K] COG0583 Transcriptional regulator Bme Brucella melitensis Length = 325 Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 6/234 (2%) Query: 1 MEKPLDLDAVQAFVLAADLHSFTRAAEALESTQSAISLKLKKLEQRLGRRLLERTPRQVR 60 M PLDLD +Q FV AD SFTRAA+A+ TQSA+S+++++LE+R+G+ L +R R R Sbjct: 4 MGAPLDLDQLQTFVAIADAGSFTRAADAVFKTQSAVSMQMRRLEERIGKPLFDRDGRTNR 63 Query: 61 LSAEGQQFLPAARELLAAHERALEQLD----QGPVRFSVGISDHVAGASLPRALAQVHAL 116 L+ +G++ L AR ++ + + D +G VR +G D A LP +A+ Sbjct: 64 LTEDGERLLLYARRMMHLNSETIAAFDDTQLEGHVR--IGTPDDYADRFLPEIMARFARS 121 Query: 117 DPGVVVEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAG 176 +P V + V + +L + RG LD +V + R ++V E + W + Sbjct: 122 NPRVELSVVCEPTVNLDEMIRRGTLDIALVTQCDDKRRSEVVRTEPLLWVTSTNHAVHEE 181 Query: 177 GALRVATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSAL 230 L +A C R ++ L+AA + + + AAV +GLAVS L Sbjct: 182 AMLPLAVGRPTCIWRHAAIDVLEAARRDYRIIITSWSATVLAAAVLSGLAVSVL 235