BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0048.p (131 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value all0824_3 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 75 4e-14 CAC1700 [TK] COG0745 Response regulators consisting of a CheY-li... 74 6e-14 sll1555_1 [T] COG0784 FOG Syn Synechocystis 74 7e-14 all5069 [TK] COG2197 Response regulator containing a CheY-like r... 74 1e-13 slr1042 [T] COG0784 FOG Syn Synechocystis 73 2e-13 PA3974_3 [T] COG0784 FOG Pae Pseudomonas aeruginosa 71 5e-13 mlr6691 [T] COG0784 FOG Mlo Mesorhizobium loti 71 6e-13 all1068_2 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 71 7e-13 AF1898 [T] COG0784 FOG Afu Archaeoglobus fulgidus 70 1e-12 sll1905_1 [T] COG0784 FOG Syn Synechocystis 70 1e-12 >all0824_3 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 Length = 202 Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 62/113 (54%) Query: 15 LLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLEL 74 +L+VDD+ +I + LE GY V A G DA+ + + PDL++ D MMP +NG ++ Sbjct: 3 ILVVDDDANIRELLRQQLENEGYNVREAKDGMDAIHQIKISSPDLIVLDVMMPQINGFDV 62 Query: 75 CAALRRLPGGAQLPVILCSGAPERHDLSQSSHNLFLRKPVFFDRLLEEIGRLL 127 A L+ P A +P+I+ S + + +L KP+ + LL EIG LL Sbjct: 63 AAVLKNDPLTADIPIIILSIVENKERGHHIGIDRYLTKPINTEELLNEIGSLL 115 >CAC1700 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Cac Clostridium acetobutylicum Length = 232 Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 53/86 (61%) Query: 15 LLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLEL 74 +L+VDDE I LE +GY+VITA G +AL+KA+ P LV+ D M+PVM+G ++ Sbjct: 6 ILVVDDEEHIVKLIKFNLENNGYKVITAADGGEALEKAKGEVPQLVLLDLMLPVMDGYDV 65 Query: 75 CAALRRLPGGAQLPVILCSGAPERHD 100 C +RR + +PVI+ + E D Sbjct: 66 CREIRRDQSISNMPVIMITAKGEELD 91 >sll1555_1 [T] COG0784 FOG Syn Synechocystis Length = 120 Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%) Query: 12 LPLLLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNG 71 +P +LI++D++++ +L L Y VI+A G L A+QH PDL++ D MMP + G Sbjct: 1 MPKILIIEDQLEVRQNIEDILSLEDYEVISAPDGETGLALAKQHLPDLILCDVMMPRVTG 60 Query: 72 LELCAALRRLPGGAQLPVILCSGAPERHDLSQSSH---NLFLRKPVFFDRLLEEI 123 E+ +LR+ P A +P IL + + H Q + +L KP D LL I Sbjct: 61 FEVLMSLRQDPNLAVIPFILLTAKADHHAFRQGMELGADDYLTKPFTIDELLHAI 115 >all5069 [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Nos Nostoc sp. PCC 7120 Length = 245 Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 4/121 (3%) Query: 11 ALPL-LLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVM 69 ++PL +L+VDD++ + S LEL GY VITA G +AL + PDL+++D +MP M Sbjct: 18 SMPLTILVVDDDLGTRLSISDYLELSGYSVITANDGQEALTMVEAYHPDLIVTDIVMPRM 77 Query: 70 NGLELCAALRRLPGGAQLPVILCSG---APERHDLSQSSHNLFLRKPVFFDRLLEEIGRL 126 NG EL +R+ P LPVIL + ER QS +L+L KP + L I L Sbjct: 78 NGYELVRRVRQQPPFRLLPVILLTARTRTQERILGYQSGCDLYLPKPFELEELAAAIRNL 137 Query: 127 L 127 L Sbjct: 138 L 138 >slr1042 [T] COG0784 FOG Syn Synechocystis Length = 147 Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 52/86 (60%) Query: 15 LLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLEL 74 +L+V+D + S +L+ HG++V AC G +AL+K + PDLV+ D +MP MNG E+ Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 75 CAALRRLPGGAQLPVILCSGAPERHD 100 C ++ P +PVI+CS E D Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFD 115 >PA3974_3 [T] COG0784 FOG Pae Pseudomonas aeruginosa Length = 127 Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 4/109 (3%) Query: 14 LLLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLE 73 +L++ D+ ++ T MLL+L GYRV TA +G++AL+ + PD V+ DC MPVM+G Sbjct: 2 VLVVEDNAINQLVTRGMLLKL-GYRVRTADNGSEALELLARERPDGVLLDCQMPVMDGFA 60 Query: 74 LCAALRRLPGGAQLPVILCSG---APERHDLSQSSHNLFLRKPVFFDRL 119 C A+R LPG A+LPV+ + + +R + + ++ KPV F+ L Sbjct: 61 TCRAIRALPGCAELPVLALTAHSHSGDRERCLAAGMSDYMAKPVKFEEL 109 >mlr6691 [T] COG0784 FOG Mlo Mesorhizobium loti Length = 130 Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Query: 15 LLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLEL 74 +LI DD+ + + L GY VITA GA+AL KA QH PD+++ D MMP +GLE+ Sbjct: 8 VLICDDDPLLLELMEFRLRAKGYEVITAVDGAEALAKAEQHGPDIIVLDAMMPKADGLEV 67 Query: 75 CAALRRLPGGAQLPVILCSGAPERHDLS---QSSHNLFLRKPVFFDRLLEEIGRLL 127 A L+ P + PV++ + D+ + + +L KP + LL + RL+ Sbjct: 68 LARLKGDPVLSDTPVVMLTARKAERDIVSALEKGADDYLVKPFIPEELLARLARLI 123 >all1068_2 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 Length = 167 Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 6/119 (5%) Query: 14 LLLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPD--LVISDCMMPVMNG 71 ++L+VDD + + T S+ L+ GY+VI A +GA+AL++ ++H P+ LV+SD MP MNG Sbjct: 37 VILVVDDAISLRQTLSLTLQKSGYQVIQAQNGAEALEQLQRH-PEIQLVVSDLEMPRMNG 95 Query: 72 LELCAALRRLPGGAQLPV-ILCSGAPERH-DLSQS-SHNLFLRKPVFFDRLLEEIGRLL 127 E + ++ P ++PV IL S + E+H L++ +L KP L+ I L+ Sbjct: 96 FEFLSHIQHNPQYTKIPVIILTSRSAEKHRQLAKELGAKAYLSKPYLEHELINHIESLI 154 >AF1898 [T] COG0784 FOG Afu Archaeoglobus fulgidus Length = 117 Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 67/113 (59%), Gaps = 2/113 (1%) Query: 15 LLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLEL 74 +++VDDE+ + + ++L Y+VI A +G +A++ R+ PD+V+ D MMP+MNG+E Sbjct: 4 VMVVDDEIAMREILKIML--KDYKVIEASNGREAVELYREERPDIVLMDVMMPLMNGIEA 61 Query: 75 CAALRRLPGGAQLPVILCSGAPERHDLSQSSHNLFLRKPVFFDRLLEEIGRLL 127 + ++++ A++ I + + + ++ + L+KP ++E I R+L Sbjct: 62 TSEIKKIDPDAKIVAITAYASSKGEKVIEAGADYILKKPFTRKEVVELIKRIL 114 >sll1905_1 [T] COG0784 FOG Syn Synechocystis Length = 125 Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 52/91 (57%) Query: 14 LLLIVDDEVDITDTYSMLLELHGYRVITACHGADALDKARQHWPDLVISDCMMPVMNGLE 73 L+L+VDD + S LLE GY G +AL + Q PDL++ D MMP M+GLE Sbjct: 19 LILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLE 78 Query: 74 LCAALRRLPGGAQLPVILCSGAPERHDLSQS 104 +C L++ P +PVI + + E+ DL Q+ Sbjct: 79 VCDRLKQDPQTRDIPVIFLTASNEKQDLLQA 109