BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0229.p (318 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value STM2692 [M] COG0845 Membrane-fusion protein Sty Salmonella typhi... 112 2e-24 PA1877 [M] COG0845 Membrane-fusion protein Pae Pseudomonas aerug... 108 1e-23 Z0635 [M] COG0845 Membrane-fusion protein EcZ Escherichia coli O... 107 5e-23 ECs0544 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli... 107 5e-23 RSp1183 [M] COG0845 Membrane-fusion protein Rso Ralstonia solana... 93 9e-19 VCA1080 [M] COG0845 Membrane-fusion protein Vch Vibrio cholerae 79 1e-14 AGl2998 [M] COG0845 Membrane-fusion protein Atu Agrobacterium tu... 64 3e-10 CC1009 [M] COG0845 Membrane-fusion protein Ccr Caulobacter vibri... 62 1e-09 SMb21315 [M] COG0845 Membrane-fusion protein Sme Sinorhizobium m... 61 3e-09 all5304 [M] COG0845 Membrane-fusion protein Nos Nostoc sp. PCC 7120 61 4e-09 >STM2692 [M] COG0845 Membrane-fusion protein Sty Salmonella typhimurium LT2 Length = 387 Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 114/194 (58%) Query: 24 VLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQGQLLMVL 83 L+L +WA ++D+V+ G+VI SR Q +Q+ DGG + Q+ V+EG+ V+ Q++ L Sbjct: 26 FLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARL 85 Query: 84 EQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQKDLYVKRKI 143 + R+ +++ +S AK A S ARL AEV PL F +L + + IA + LY R+ Sbjct: 86 DPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRA 145 Query: 144 LIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINNKRNKYFQ 203 + A L+D L N+EL + + LE++G +VLRLQR +D+ +I + R++Y+ Sbjct: 146 QLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYV 205 Query: 204 EALVDMTKVQEDLN 217 +A ++K +++ Sbjct: 206 QAREALSKANAEVD 219 >PA1877 [M] COG0845 Membrane-fusion protein Pae Pseudomonas aeruginosa Length = 395 Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/293 (27%), Positives = 157/293 (53%), Gaps = 14/293 (4%) Query: 8 NPLISAQ--------WVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPD 59 +PL++A W L + VL+ + WAA +Q+D+VTR G+V+ SR Q +Q+ + Sbjct: 16 DPLLAATHPVYRPLLWTL---LGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLE 72 Query: 60 GGPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYG-HPL 118 GG + ++LVKEG+ V+ GQ L+ L++ R T+ +S + + LR ++ARL AEV G + Sbjct: 73 GGILDRLLVKEGDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGKKSI 132 Query: 119 NFEPDLLDYKEYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRA 178 F PD+ ++++L+ R+ + + ++Q + LA +L++ + L V + Sbjct: 133 EFPPDVDPEGPLARSERELFKSRRDKLVEGTQAIQRQIHLAQSQLDLVRPLVAKRAVSQM 192 Query: 179 DVLRLQRNVADIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQLAESQLQEIRT-IRGE 237 + L+L +++A + ++ ++ YFQ+A + + + DL+ + + Q Q RT I Sbjct: 193 EALKLSQDIATLSGKLTELKSTYFQDAYTERAQRKADLSALEPIVQQRQDQLRRTEILSP 252 Query: 238 MCRQTDAILLAT-SRMRQASEPLAKGLETLQKQLAFYRVVAVRNHLLSLGVPA 289 + + + +L+ T + Q EP+ + + ++ L ++ L G+PA Sbjct: 253 VRGRVNTVLINTRGGVIQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPA 305 >Z0635 [M] COG0845 Membrane-fusion protein EcZ Escherichia coli O157:H7 EDL933 Length = 391 Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 113/204 (55%) Query: 17 LRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQ 76 +R++ +L L WA Q+D+VT G V R Q VQ+ +GG + + VK G+ V+Q Sbjct: 23 VRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGILYHLDVKVGDIVEQ 82 Query: 77 GQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQKD 136 GQ L L + + ++ + ++ +++ A + ARLRAEV PL F +L + E I ++ Sbjct: 83 GQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSNKPLVFPDELNKFPELIESETA 142 Query: 137 LYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINN 196 LY R+ +++ L + L N+EL M + L + G +VLRLQR ++ ++++ Sbjct: 143 LYNTRRDGLNKATTGLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQRQANELENKLSD 202 Query: 197 KRNKYFQEALVDMTKVQEDLNTQR 220 R +Y+ +A ++ K ++ TQR Sbjct: 203 VRTQYYVQAREELAKANAEVETQR 226 >ECs0544 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli O157:H7 Length = 391 Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 113/204 (55%) Query: 17 LRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQ 76 +R++ +L L WA Q+D+VT G V R Q VQ+ +GG + + VK G+ V+Q Sbjct: 23 VRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGILYHLDVKVGDIVEQ 82 Query: 77 GQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQKD 136 GQ L L + + ++ + ++ +++ A + ARLRAEV PL F +L + E I ++ Sbjct: 83 GQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSNKPLVFPDELNKFPELIESETA 142 Query: 137 LYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINN 196 LY R+ +++ L + L N+EL M + L + G +VLRLQR ++ ++++ Sbjct: 143 LYNTRRDGLNKATTGLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQRQANELENKLSD 202 Query: 197 KRNKYFQEALVDMTKVQEDLNTQR 220 R +Y+ +A ++ K ++ TQR Sbjct: 203 VRTQYYVQAREELAKANAEVETQR 226 >RSp1183 [M] COG0845 Membrane-fusion protein Rso Ralstonia solanacearum Length = 358 Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 29 LWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQGQLLMVLEQDRV 88 +WAA + +D+V +G+V S+ Q +Q+ +GG + ++ +EG+ V+ GQ L L+ + Sbjct: 1 MWAAFAGLDEVAIGEGKVTPASKGQVIQSLEGGILSELAAREGDVVEAGQKLATLDPVQA 60 Query: 89 QTSLNDSRAKVAALRISLARLRAEVYGHP-LNFEPDLLDYKEYIANQKDLYVKRKILIDQ 147 ++S+ ++ +++AL+ ARLRAE+ P + F P+L K ++ L+ + + Sbjct: 61 RSSMEEALERISALQARAARLRAEMDDLPEVTFPPELAREKAVTDRERQLFAANRRAFRE 120 Query: 148 DLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINNKRNKYFQEALV 207 ++A+L++ L LA EL++ L RTG ++LRL++ A+ ++ +++Y+ Sbjct: 121 NVANLREQLRLAEDELKIAMPLLRTGATNEVEILRLKQRAAEFATKLAATQSEYYVALKA 180 Query: 208 DMTKVQEDLN 217 D DL Sbjct: 181 DYASTMADLG 190 >VCA1080 [M] COG0845 Membrane-fusion protein Vch Vibrio cholerae Length = 481 Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 42/227 (18%) Query: 12 SAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEG 71 SA+ +L + +A ++ + WA+ ++ID+VT QG+V+ S+ Q +Q +GG VKQILV+EG Sbjct: 49 SARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREG 108 Query: 72 EAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPL--NFEPD------ 123 E V++GQ L++L+ R ++ + +VA L S+ +L A + + NFE Sbjct: 109 EQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSV 168 Query: 124 LLDYKEYIA------NQKDLYVKRKILIDQDLASLQDMLGL------------------- 158 LDY + +Q DL +++ QDL +L++ L + Sbjct: 169 QLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARI 228 Query: 159 ---------ANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINN 196 A +EL++ + L G V + ++L+LQR + D R ++ + Sbjct: 229 INLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 275 >AGl2998 [M] COG0845 Membrane-fusion protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 497 Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 47/284 (16%) Query: 17 LRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQ 76 L + +AS WA + + AQG +A + VQ +GG +K+++V EG+ VK Sbjct: 80 LAVLLASFGGFGYWAGTAPLSSAIIAQGSFVATGNNKVVQHLEGGIIKEMMVSEGDTVKV 139 Query: 77 GQLLMVLEQDRVQTSLNDSRAKVAALRIS--LARLRAEVYGHPLNFEPDLL-------DY 127 G +L+ L D+ N+ ++ LR+ + RLRAE G PD++ D Sbjct: 140 GDVLLTL--DKTTALANERMFQLRRLRLETIVTRLRAEAQGEKSFKVPDIVMKEASDPDI 197 Query: 128 KEYIANQKDLYVKRKILIDQDLA---------------------SLQDMLGLANQELEMN 166 K I +Q ++ + + +D+ L S L L QE + Sbjct: 198 KSIIQSQNVVFHSKLVKLDEQLNLINKNIKSLEFRFAGYDGQKQSFDRQLALLTQERDSK 257 Query: 167 KSLERTGDVGRADVLRLQRNVADIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQLAES 226 + L + G + + D+L L+R +AD A+ D+ ++ ++N ++A+ Sbjct: 258 ERLAKDGVIRKTDMLALERAIAD---------------AMGDIARLTGEMNQSEAEIAKF 302 Query: 227 QLQEIRTIRGEMCRQTDAILLATSRMRQASEPLAKGLETLQKQL 270 + + + + DA+ +A S + E + E L++ + Sbjct: 303 KQEAVIAVNANKQAALDALEIAESDLDSVREQVRGAAEVLERTV 346 >CC1009 [M] COG0845 Membrane-fusion protein Ccr Caulobacter vibrioides Length = 436 Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 35/253 (13%) Query: 9 PLISAQWVLRLSMA----SVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVK 64 P + Q V R+ + + LL WAA + +D A G V A ++VQ +GG + Sbjct: 9 PTDNFQAVARIGYGIIALTFVGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQHLEGGMLA 68 Query: 65 QILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHP-LNFEPD 123 +ILV+EGE VK GQ+L L+ + + +R + AL+ ARL AE P ++F D Sbjct: 69 KILVREGEKVKAGQVLFELDPTQANAAAGITRNQYVALKAMEARLLAERDQRPSISFPAD 128 Query: 124 LLDYK------EYIANQKDLYVKRKIL---------------------IDQDLASLQDML 156 L + IA+++ + +R+ ID+ L+D L Sbjct: 129 LTSQRADPMVARAIADEQAQFTERRQTIQGQVDLMNAQRLQYQSEIEGIDRQTQGLKDQL 188 Query: 157 GLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINN---KRNKYFQEALVDMTKVQ 213 G EL + L G V R +L L+R A + I R+K Q A KV+ Sbjct: 189 GFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTADRSKAVQGASDTQLKVR 248 Query: 214 EDLNTQREQLAES 226 + EQ+++S Sbjct: 249 QIKQEFFEQVSQS 261 >SMb21315 [M] COG0845 Membrane-fusion protein Sme Sinorhizobium meliloti Length = 473 Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%) Query: 18 RLSMASVLVLLL-------WAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKE 70 RL +A + +L+ WA +++ + G ++ S+ ++V +GG + +ILV+E Sbjct: 54 RLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIVVDSKRKTVSHFEGGVLGRILVQE 113 Query: 71 GEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYG-HPLNFEPDLLDYKE 129 G+ V GQ LM LE R ++ L +++ L LARLRAE G H ++F DL+ E Sbjct: 114 GDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRAERAGLHAVSFPADLVSEGE 173 Query: 130 YIAN----QKDLYVKR 141 A+ +K + KR Sbjct: 174 AAADAVTAEKAFFEKR 189 >all5304 [M] COG0845 Membrane-fusion protein Nos Nostoc sp. PCC 7120 Length = 498 Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%) Query: 24 VLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQGQLLMVL 83 V + WAA+S+ID+V AQG++IA ++ + V + G +K I VKEG+ V + Q+L+ Sbjct: 53 VFGTIAWAALSEIDEVAVAQGELIASAQVRPVTSLGDGTIKAIQVKEGDRVTKDQVLIQR 112 Query: 84 EQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQKDLYVKRKI 143 + D QT + ++ + RL+A E I Q V + Sbjct: 113 DPDLKQTDVTRLAQSTKLIQQDIQRLQA-----------------ERIGGQSTGTVIQDE 155 Query: 144 LIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINNKRNKYFQ 203 L+ L Q G A E +SL D R ++RLQ N+ + R + N + F Sbjct: 156 LLKSRLRDYQARQGAAEAEASRQRSLI---DQARVRLIRLQDNLVNARTSVANAKTNLFN 212 Query: 204 EALVDMTKVQEDLNTQREQLAESQLQEIRTI 234 + +KV+E+L ++A+S+ + +RT+ Sbjct: 213 ARSIS-SKVEENL-----EIAQSREKNLRTL 237