BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0171.p (105 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0179 [T] COG0784 FOG Pae Pseudomonas aeruginosa 145 2e-35 RSp1409 [T] COG0784 FOG Rso Ralstonia solanacearum 111 5e-25 VCA1096 [T] COG0784 FOG Vch Vibrio cholerae 107 9e-24 SMc03006 [T] COG0784 FOG Sme Sinorhizobium meliloti 100 8e-22 CC0432 [T] COG0784 FOG Ccr Caulobacter vibrioides 100 1e-21 AGc909 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 ... 97 7e-21 BB0570 Non COG 92 3e-19 YPO1680 [T] COG0784 FOG Ype Yersinia pestis 85 3e-17 VC1398 [T] COG0784 FOG Vch Vibrio cholerae 84 1e-16 STM1916 [T] COG0784 FOG Sty Salmonella typhimurium LT2 82 2e-16 >PA0179 [T] COG0784 FOG Pae Pseudomonas aeruginosa Length = 121 Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 68/104 (65%), Positives = 82/104 (78%) Query: 1 MVVFSLKAAGYNVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYAR 60 M+ F+LK+AGY V EA DG + L KA+S+++ LV TDQNMP MDGL+LIRSLR L Y Sbjct: 17 MLSFTLKSAGYEVDEAADGKEGLGKAQSKSYSLVFTDQNMPNMDGLSLIRSLRNLAGYRS 76 Query: 61 VPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVI 104 VPILMLTTE SD MK +G++AGA GWLVKPFDP +L EV RKV+ Sbjct: 77 VPILMLTTESSDAMKQQGRSAGATGWLVKPFDPPKLLEVTRKVL 120 >RSp1409 [T] COG0784 FOG Rso Ralstonia solanacearum Length = 137 Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 3/107 (2%) Query: 1 MVVFSLKAAGYNVTEAVDGVDALEKAKSQ---TFDLVLTDQNMPRMDGLTLIRSLRELTS 57 M+ L+A G+ VTEA DG ALE + Q + LV+TDQ MP MDGLTLIR+LR L + Sbjct: 18 MIATCLRACGFAVTEATDGAAALEAVQRQADGSHHLVITDQVMPAMDGLTLIRALRTLPA 77 Query: 58 YARVPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVI 104 YA PILMLTTE ++ + +AAGA G+L KPFDP LT+ V +++ Sbjct: 78 YADTPILMLTTEADSTIRDQARAAGATGFLPKPFDPDGLTDSVMQLL 124 >VCA1096 [T] COG0784 FOG Vch Vibrio cholerae Length = 125 Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 50/104 (48%), Positives = 71/104 (68%) Query: 1 MVVFSLKAAGYNVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYAR 60 MV +L+ AGY V A DG +AL KA+ FD++++D NMP M G ++++R + Y Sbjct: 22 MVSHTLQDAGYEVETAADGREALAKAQKARFDVIISDVNMPVMTGFEFVKAVRMQSQYKF 81 Query: 61 VPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVI 104 PILMLTTE S E K +GKA GA GWLVKPF+P+ L + +++V+ Sbjct: 82 TPILMLTTETSPEKKQEGKAVGATGWLVKPFNPETLLKTLQRVL 125 >SMc03006 [T] COG0784 FOG Sme Sinorhizobium meliloti Length = 121 Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 67/103 (65%) Query: 1 MVVFSLKAAGYNVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYAR 60 M++ +L AG+ +A DGV+ LEK + D+++TD NMPR+DG I +R+ Y Sbjct: 17 MLLVTLNNAGFETIQAEDGVEGLEKLDTANPDVIVTDINMPRLDGFGFIEGVRKNDRYRA 76 Query: 61 VPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKV 103 VPIL+LTTE E K + + AGA GW+VKPFDP +L + + +V Sbjct: 77 VPILVLTTESDAEKKNRARQAGATGWIVKPFDPTKLIDAIERV 119 >CC0432 [T] COG0784 FOG Ccr Caulobacter vibrioides Length = 121 Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 45/103 (43%), Positives = 67/103 (65%) Query: 1 MVVFSLKAAGYNVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYAR 60 M+ +L AG+NV EAVDG LE + D+++TD NMP++DG I ++R Y Sbjct: 17 MLRMALAGAGFNVVEAVDGEHGLEVLSAHRPDVIITDINMPKLDGFGFIEAVRVDDDYRA 76 Query: 61 VPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKV 103 +PIL+LTTE K + + AGA GW+VKPF+P++L + +R+V Sbjct: 77 IPILVLTTESDPAKKQRAREAGATGWIVKPFNPEKLVDAIRRV 119 >AGc909 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 121 Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 65/103 (63%) Query: 1 MVVFSLKAAGYNVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYAR 60 M++ +L AG+ +A DG++ LE + D+++TD NMPR+DG I +R Y Sbjct: 17 MLLVTLNNAGFETIQAEDGIEGLEVLEQSNPDVIVTDINMPRLDGFGFIEGVRRNEKYRA 76 Query: 61 VPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKV 103 +PIL+LTTE E K + + AGA GW+VKPFDP +L + + +V Sbjct: 77 IPILVLTTESDAEKKNRARQAGATGWIVKPFDPAKLIDAIERV 119 >BB0570 Non COG Length = 124 Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 8/108 (7%) Query: 2 VVFSLKAAGYNVTEAVDGVDALEKAKS------QTFDLVLTDQNMPRMDGLTLIRSLREL 55 V + L+ G+ V+EA DG++ + + K + FDLV+TD NMP +DG+ +I+ +RE Sbjct: 18 VAYILEQNGFGVSEAKDGLEGVLRFKEAVGQGDKDFDLVITDINMPNLDGIGVIKQIREF 77 Query: 56 TSYARVPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKV 103 S+ VPIL+LTTE +G+ AGA GWLVKPF+P+ L + + K+ Sbjct: 78 GSF--VPILVLTTESEQSKVDEGRKAGATGWLVKPFNPEALMKTISKI 123 >YPO1680 [T] COG0784 FOG Ype Yersinia pestis Length = 129 Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 1/100 (1%) Query: 6 LKAAGY-NVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYARVPIL 64 LK G+ NV EA DGVDAL K ++ FD V++D NMP MDGL L++++R + A +P+L Sbjct: 25 LKELGFHNVEEAEDGVDALNKLRAGGFDFVVSDWNMPNMDGLDLLKTIRTDGALATLPVL 84 Query: 65 MLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVI 104 M+T E E AGA+G++VKPF L E + K+ Sbjct: 85 MVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIF 124 >VC1398 [T] COG0784 FOG Vch Vibrio cholerae Length = 124 Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 62/100 (62%) Query: 6 LKAAGYNVTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYARVPILM 65 L+ G + EA +GV+ALE+A DL L D NMP+MDG TL+R +R A +P +M Sbjct: 22 LEEIGIFILEASNGVEALERALEMPVDLFLVDINMPKMDGFTLVREIRCRPELAGIPTVM 81 Query: 66 LTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVIG 105 ++TE + + +G GAN ++VKP +P+ L + V ++G Sbjct: 82 ISTESQESDRQQGIHMGANLYMVKPVNPEELQQTVTLMLG 121 >STM1916 [T] COG0784 FOG Sty Salmonella typhimurium LT2 Length = 129 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 1/100 (1%) Query: 6 LKAAGYN-VTEAVDGVDALEKAKSQTFDLVLTDQNMPRMDGLTLIRSLRELTSYARVPIL 64 LK G+N V EA DGVDAL K ++ F +++D NMP MDGL L++++R ++ + +P+L Sbjct: 25 LKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVL 84 Query: 65 MLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVI 104 M+T E E AGA+G++VKPF L E + K+ Sbjct: 85 MVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIF 124