BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0137.p (420 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1215 [I] COG0821 Enzyme involved in the deoxyxylulose pathway... 694 0.0 NMA1524 [I] COG0821 Enzyme involved in the deoxyxylulose pathway... 575 e-164 NMB1310 [I] COG0821 Enzyme involved in the deoxyxylulose pathway... 575 e-164 XF2575 [I] COG0821 Enzyme involved in the deoxyxylulose pathway ... 561 e-159 BMEI0269 [I] COG0821 Enzyme involved in the deoxyxylulose pathwa... 556 e-158 mll3792 [I] COG0821 Enzyme involved in the deoxyxylulose pathway... 551 e-156 SMc03888 [I] COG0821 Enzyme involved in the deoxyxylulose pathwa... 548 e-156 DR0386 [I] COG0821 Enzyme involved in the deoxyxylulose pathway ... 540 e-153 AGc4936 [I] COG0821 Enzyme involved in the deoxyxylulose pathway... 535 e-151 PA3803 [I] COG0821 Enzyme involved in the deoxyxylulose pathway ... 219 7e-57 >RSc1215 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Rso Ralstonia solanacearum Length = 431 Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/415 (80%), Positives = 369/415 (88%) Query: 1 MSSSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLA 60 + +P GPL RR+SR I G R + VGG APV VQSMTNTDTADAIGTAIQ+K+LA Sbjct: 7 VDCAPALPGPLPRRHSRAAEIRWGERLVRVGGDAPVCVQSMTNTDTADAIGTAIQVKELA 66 Query: 61 RAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSK 120 R GSE+VR+TVNTPEAAAAVPAIREQLDRMG+DVPLVGDFHYNGH LL ++P CA+ALSK Sbjct: 67 RTGSELVRITVNTPEAAAAVPAIREQLDRMGIDVPLVGDFHYNGHKLLQDHPACAEALSK 126 Query: 121 YRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPW 180 YRINPGNVG+GAKRDTQFAQMIE AC+Y KPVRIGVNWGSLDQ LLARIMDENA RA PW Sbjct: 127 YRINPGNVGQGAKRDTQFAQMIETACRYGKPVRIGVNWGSLDQDLLARIMDENAQRAAPW 186 Query: 181 SAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHL 240 A+AVM EAL+TSAIE+A++AEE+G+ G +IILSCKVS VQDLIAVYRELARRCDY LHL Sbjct: 187 DARAVMIEALITSAIESARKAEEIGLPGSQIILSCKVSAVQDLIAVYRELARRCDYALHL 246 Query: 241 GLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLR 300 GLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPG R KEV+V QEILQTMGLR Sbjct: 247 GLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVIVAQEILQTMGLR 306 Query: 301 KFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGP 360 FTPMVIACPGCGRTTSTVFQ+LA +IQ++LREQMPVWK +YPGVE MNVAVMGCIVNGP Sbjct: 307 NFTPMVIACPGCGRTTSTVFQELAARIQSYLREQMPVWKTQYPGVEDMNVAVMGCIVNGP 366 Query: 361 GESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYG 415 GESKHANIGISLPGTGESPAAPVF+DG K TLRGE IAE+FQ +V +YV +HYG Sbjct: 367 GESKHANIGISLPGTGESPAAPVFVDGVKVKTLRGERIAEDFQVIVDEYVRTHYG 421 >NMA1524 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis NmA Neisseria meningitidis Z2491 Length = 421 Score = 575 bits (1483), Expect = e-164, Method: Compositional matrix adjust. Identities = 277/406 (68%), Positives = 331/406 (81%), Gaps = 4/406 (0%) Query: 11 LVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRLT 70 L RR + +V I H I VG APV++QSMTNTDTADA TA+QIK+L+ AGSE+VR+T Sbjct: 4 LQRRKTHQVRIDH----ITVGSEAPVVIQSMTNTDTADAKATALQIKELSDAGSEMVRIT 59 Query: 71 VNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVGK 130 VN+PEAA+ V IR +LD MG PL+GDFH+NG LL E+PEC +ALSKYRINPGNVGK Sbjct: 60 VNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPECGKALSKYRINPGNVGK 119 Query: 131 GAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQAVMYEAL 190 G K D +FA MI A + DK VRIGVNWGSLDQ+L R+MD N + P + V EAL Sbjct: 120 GVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMDANLASSAPKPPEEVTKEAL 179 Query: 191 VTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGSK 250 + SA+E+A++A LG+ DKIILSCKVS VQDLI VYREL RC YPLHLGLTEAGMGSK Sbjct: 180 IVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRELGSRCAYPLHLGLTEAGMGSK 239 Query: 251 GIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIACP 310 GIVASTAALSVLLQEGIGDTIRISLTPEPG RT+EVVVGQEILQTMGLR FTPMV ACP Sbjct: 240 GIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEVVVGQEILQTMGLRSFTPMVTACP 299 Query: 311 GCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIGI 370 GCGRTTSTVFQ+LA +Q +LR++M +W+ YPGVE++NVAVMGC+VNGPGESK A+IGI Sbjct: 300 GCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGVESLNVAVMGCVVNGPGESKLADIGI 359 Query: 371 SLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416 SLPGTGE+P APV++DGE+K+TL+G++IA EF +V +YV+++YG+ Sbjct: 360 SLPGTGETPVAPVYVDGERKVTLKGDNIATEFLAIVEEYVKTNYGE 405 >NMB1310 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Nme Neisseria meningitidis MC58 Length = 421 Score = 575 bits (1481), Expect = e-164, Method: Compositional matrix adjust. Identities = 277/406 (68%), Positives = 331/406 (81%), Gaps = 4/406 (0%) Query: 11 LVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRLT 70 L RR + +V I H I VG APV++QSMTNTDTADA TA+QIK+L+ AGSE+VR+T Sbjct: 4 LQRRKTHQVRIDH----ITVGSEAPVVIQSMTNTDTADAKATALQIKELSDAGSEMVRIT 59 Query: 71 VNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVGK 130 VN+PEAA+ V IR +LD MG PL+GDFH+NG LL E+PEC +ALSKYRINPGNVGK Sbjct: 60 VNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPECGKALSKYRINPGNVGK 119 Query: 131 GAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQAVMYEAL 190 G K D +FA MI A + DK VRIGVNWGSLDQ+L R+MD N + P + V EAL Sbjct: 120 GVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMDANLASSAPKPPEEVTKEAL 179 Query: 191 VTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGSK 250 + SA+E+A++A LG+ DKIILSCKVS VQDLI VYREL RC YPLHLGLTEAGMGSK Sbjct: 180 IVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRELGSRCAYPLHLGLTEAGMGSK 239 Query: 251 GIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIACP 310 GIVASTAALSVLLQEGIGDTIRISLTPEPG RT+EVVVGQEILQTMGLR FTPMV ACP Sbjct: 240 GIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEVVVGQEILQTMGLRSFTPMVTACP 299 Query: 311 GCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIGI 370 GCGRTTSTVFQ+LA +Q +LR++M +W+ YPGVE++NVAVMGC+VNGPGESK A+IGI Sbjct: 300 GCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGVESLNVAVMGCVVNGPGESKLADIGI 359 Query: 371 SLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416 SLPGTGE+P APV++DGE+K+TL+G++IA EF +V +YV+++YG+ Sbjct: 360 SLPGTGETPVAPVYVDGERKVTLKGDNIATEFLAIVEEYVKTNYGE 405 >XF2575 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Xfa Xylella fastidiosa 9a5c Length = 417 Score = 561 bits (1445), Expect = e-159, Method: Compositional matrix adjust. Identities = 267/407 (65%), Positives = 324/407 (79%), Gaps = 4/407 (0%) Query: 10 PLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRL 69 P RR ++ V I H + VGGG PV+VQSMTNTDTAD + + Q+ +L RAGSE+VRL Sbjct: 12 PWPRRRTQAVNIGH----VTVGGGHPVVVQSMTNTDTADVVASTKQVAELWRAGSEMVRL 67 Query: 70 TVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVG 129 TVN ++AAA+P I E+L MG+DVPL+GDFHYNGH LL + P CA+ L+KYRINPGNVG Sbjct: 68 TVNNAQSAAAIPRIAERLAMMGIDVPLIGDFHYNGHQLLADEPACAEVLAKYRINPGNVG 127 Query: 130 KGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQAVMYEA 189 G KRD QF Q+IE A +Y KP+RIG NWGSLDQ L A++MDEN R +PW A V+ E Sbjct: 128 FGKKRDLQFGQLIECAIRYGKPIRIGANWGSLDQMLAAQLMDENNRRKQPWDAAQVLREV 187 Query: 190 LVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGS 249 L+ SA+ +A+RA ELG+ D+I+LS KVSGVQ+LIAVYR++A RCD+ LHLGLTEAG+GS Sbjct: 188 LICSAVGSAERAVELGLPRDRIVLSAKVSGVQELIAVYRDMAARCDFALHLGLTEAGIGS 247 Query: 250 KGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIAC 309 KGIVAS+AAL+VLLQEGIGDTIRISLTPEPG RT+EV+V QE+LQT G R FTPMV AC Sbjct: 248 KGIVASSAALAVLLQEGIGDTIRISLTPEPGQSRTQEVIVAQELLQTTGHRAFTPMVTAC 307 Query: 310 PGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIG 369 PGCGRTTS FQ+LA +Q +R++M VWK +PG E M +AVMGC+VNGPGES+HANIG Sbjct: 308 PGCGRTTSEFFQELAKTVQQHVRDKMQVWKITHPGAETMTLAVMGCVVNGPGESRHANIG 367 Query: 370 ISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416 ISLPGTGE P APVFIDGEK +TLRGE+IA++F +V DYVE Y + Sbjct: 368 ISLPGTGEMPVAPVFIDGEKSVTLRGENIAQDFIALVDDYVERRYAR 414 >BMEI0269 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Bme Brucella melitensis Length = 437 Score = 556 bits (1432), Expect = e-158, Method: Compositional matrix adjust. Identities = 266/384 (69%), Positives = 318/384 (82%) Query: 34 APVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVD 93 APV+VQSMTNTDTAD T Q+ L RAGSE+VR+TV+ E+AAAVP IRE+L+R+G D Sbjct: 49 APVVVQSMTNTDTADVDSTVAQVAALHRAGSEIVRITVDRDESAAAVPKIRERLERLGHD 108 Query: 94 VPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVGKGAKRDTQFAQMIEVACKYDKPVR 153 VPLVGDFHY GH LL ++P CA+AL+KYRINPGNVG K+D QFA ++E+A +YDKPVR Sbjct: 109 VPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFADIVEMAIRYDKPVR 168 Query: 154 IGVNWGSLDQALLARIMDENADRAEPWSAQAVMYEALVTSAIENAQRAEELGMAGDKIIL 213 IGVNWGSLDQ LL +MD N P SAQ VM EA+V SA+ +A AEE+G+ DKIIL Sbjct: 169 IGVNWGSLDQELLTTLMDRNQAEGAPLSAQDVMREAIVQSALISANLAEEIGLGRDKIIL 228 Query: 214 SCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRI 273 S KVS VQDLIAVY LA+R ++ LHLGLTEAGMG+KGIVAS+AA+ +LLQ+GIGDTIRI Sbjct: 229 SAKVSQVQDLIAVYTMLAQRSNHALHLGLTEAGMGTKGIVASSAAMGILLQQGIGDTIRI 288 Query: 274 SLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIACPGCGRTTSTVFQDLADKIQTFLRE 333 SLTPEPGGDRT+EV V QE+LQTMG R+F P+V ACPGCGRTTSTVFQ+LA IQ +R Sbjct: 289 SLTPEPGGDRTREVQVAQELLQTMGFRQFVPIVAACPGCGRTTSTVFQELAQTIQEDIRR 348 Query: 334 QMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIGISLPGTGESPAAPVFIDGEKKMTL 393 MP+W+ KYPGVEA++VAVMGCIVNGPGESKHA+IGISLPGTGE+P+APVF+DG+K TL Sbjct: 349 NMPLWREKYPGVEALSVAVMGCIVNGPGESKHADIGISLPGTGETPSAPVFVDGKKVTTL 408 Query: 394 RGEHIAEEFQKVVLDYVESHYGQG 417 RG IAE+FQK+V DY+E+ +G G Sbjct: 409 RGPGIAEDFQKMVADYIENRFGLG 432 >mll3792 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Mlo Mesorhizobium loti Length = 417 Score = 551 bits (1420), Expect = e-156, Method: Compositional matrix adjust. Identities = 263/382 (68%), Positives = 313/382 (81%) Query: 39 QSMTNTDTADAIGTAIQIKDLARAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVG 98 QSMTNTDTAD T Q+ L RAGSE+VR+TV+ E+AAAVP I E+L R+G++VPLVG Sbjct: 33 QSMTNTDTADIDQTVAQVAALHRAGSEIVRITVDRDESAAAVPRIHERLQRLGINVPLVG 92 Query: 99 DFHYNGHTLLTEYPECAQALSKYRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNW 158 DFHY GH LL ++P CA+AL+KYRINPGNVG K+D QF ++E+A K+DKPVRIGVNW Sbjct: 93 DFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDRQFTDIVEMAIKHDKPVRIGVNW 152 Query: 159 GSLDQALLARIMDENADRAEPWSAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVS 218 GSLDQ LL R+MD+N D+ P +AQ V EA+V SAI +A+ AEE+G+ DKIILS KVS Sbjct: 153 GSLDQELLTRLMDDNQDKGFPLTAQEVTREAIVQSAILSAEMAEEIGLGRDKIILSAKVS 212 Query: 219 GVQDLIAVYRELARRCDYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPE 278 GVQDLIAVY ELA R D+ LHLGLTEAGMGSKGIVAS+AA+ +LLQ+GIGDTIRISLTPE Sbjct: 213 GVQDLIAVYTELATRSDHALHLGLTEAGMGSKGIVASSAAMGILLQQGIGDTIRISLTPE 272 Query: 279 PGGDRTKEVVVGQEILQTMGLRKFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVW 338 P GDRT+EV V QE+LQTMG R+F P+V ACPGCGRTTSTVFQ+LA IQ LR+ MPVW Sbjct: 273 PNGDRTREVQVAQELLQTMGFRQFVPIVAACPGCGRTTSTVFQELAQNIQADLRKNMPVW 332 Query: 339 KGKYPGVEAMNVAVMGCIVNGPGESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHI 398 + KYPGVE + VAVMGCIVNGPGESKHA+IGISLPGTGE+P APVF+DG+K TLRG I Sbjct: 333 REKYPGVENLKVAVMGCIVNGPGESKHADIGISLPGTGETPTAPVFVDGKKAATLRGTSI 392 Query: 399 AEEFQKVVLDYVESHYGQGHPA 420 A +F+K+V DY+E +G+G A Sbjct: 393 AADFEKMVTDYIEQRFGRGGKA 414 >SMc03888 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Sme Sinorhizobium meliloti Length = 417 Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust. Identities = 263/382 (68%), Positives = 311/382 (81%) Query: 39 QSMTNTDTADAIGTAIQIKDLARAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVG 98 QSMTNTDTAD T Q+ L +AGSE+VR+TV+ E+AAAVP IRE+L R+G+DVPLVG Sbjct: 34 QSMTNTDTADIDATVAQVAALHKAGSELVRITVDRDESAAAVPKIRERLLRLGIDVPLVG 93 Query: 99 DFHYNGHTLLTEYPECAQALSKYRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNW 158 DFHY GH LL ++P CA+AL+KYRINPGNVG K+D QFA++IE+A +YDKPVRIGVNW Sbjct: 94 DFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFAEIIEMAIRYDKPVRIGVNW 153 Query: 159 GSLDQALLARIMDENADRAEPWSAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVS 218 GSLDQ LL R+MD N P +AQ VM E +V SA+ +A+ AEELG+ +IILS KVS Sbjct: 154 GSLDQELLTRLMDANQANGSPLTAQQVMRETIVQSALLSAELAEELGLPRSRIILSAKVS 213 Query: 219 GVQDLIAVYRELARRCDYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPE 278 GVQDLIAVY LA R + LHLGLTEAGMG+KGIVAS+A+L +L+Q+GIGDTIRISLTPE Sbjct: 214 GVQDLIAVYAMLAARSVHALHLGLTEAGMGTKGIVASSASLGILMQQGIGDTIRISLTPE 273 Query: 279 PGGDRTKEVVVGQEILQTMGLRKFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVW 338 PGGDRT+EV V QE+LQ MG R+F P+V ACPGCGRTTSTVFQ+LA KIQ +R MPVW Sbjct: 274 PGGDRTREVQVAQELLQVMGFRQFIPVVAACPGCGRTTSTVFQELAQKIQEDIRASMPVW 333 Query: 339 KGKYPGVEAMNVAVMGCIVNGPGESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHI 398 + KYPGVEA+ VAVMGCIVNGPGESKHA+IGISLPGTGE PAAPVFIDG+K +TLRG I Sbjct: 334 REKYPGVEALKVAVMGCIVNGPGESKHADIGISLPGTGEMPAAPVFIDGQKALTLRGPKI 393 Query: 399 AEEFQKVVLDYVESHYGQGHPA 420 AE+FQ +V DY+E +G G A Sbjct: 394 AEDFQLLVADYIEKRFGHGQAA 415 >DR0386 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Dra Deinococcus radiodurans Length = 429 Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust. Identities = 264/404 (65%), Positives = 316/404 (78%), Gaps = 2/404 (0%) Query: 14 RNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRLTVNT 73 R + V ++ GG ++VG P++VQSMTNTDTA+A TAIQ+ LARAGSE+VR+TVNT Sbjct: 24 RRRQTVSVNVGG--VMVGSAHPIVVQSMTNTDTANAEATAIQVAQLARAGSEIVRVTVNT 81 Query: 74 PEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVGKGAK 133 EAAAAVP + ++L +GV VP+VGDFHYNGH LL EYPE A+ L+KYRINPGNVG G + Sbjct: 82 REAAAAVPELVQRLADIGVHVPIVGDFHYNGHLLLREYPETARLLAKYRINPGNVGAGQR 141 Query: 134 RDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQAVMYEALVTS 193 D FA MIEVA ++DKPVRIGVNWGSLDQ +LAR+MDENA P S V +A++ S Sbjct: 142 HDENFATMIEVAKEFDKPVRIGVNWGSLDQQVLARLMDENAAAGHPKSPTDVTIDAMIVS 201 Query: 194 AIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGSKGIV 253 A+++A+ AEELG+ DKI++S KVS +L VYR+LA CDYPLHLGLTEAGMG KGIV Sbjct: 202 ALDSARFAEELGLGHDKILISVKVSSAPELWQVYRQLAPLCDYPLHLGLTEAGMGMKGIV 261 Query: 254 ASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIACPGCG 313 AS+ AL+ LL EGIGDTIR+SLTPEPG R EV V Q+ILQ++GLR+F P V +CPGCG Sbjct: 262 ASSVALAPLLTEGIGDTIRVSLTPEPGAPRKLEVEVAQQILQSLGLRQFLPQVTSCPGCG 321 Query: 314 RTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIGISLP 373 RTTS+ FQ LA KIQ F+RE MP WK KYPGVE M VAVMGC+VNGPGESKHANIGISLP Sbjct: 322 RTTSSFFQTLAQKIQDFIRESMPEWKAKYPGVEDMQVAVMGCVVNGPGESKHANIGISLP 381 Query: 374 GTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQG 417 GTGE P APV+ DG+ TL+G IAEEFQ+++ YVE YGQG Sbjct: 382 GTGEDPRAPVYQDGKLLTTLKGPRIAEEFQELLEKYVEERYGQG 425 >AGc4936 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 440 Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust. Identities = 253/378 (66%), Positives = 311/378 (82%) Query: 39 QSMTNTDTADAIGTAIQIKDLARAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVG 98 QSMTNTDTAD T Q+ L +AGSE+VR+TV+ E+AAAVP IRE+L R+G+DVPL+G Sbjct: 58 QSMTNTDTADIDATVRQVAALFQAGSEMVRITVDRDESAAAVPKIRERLLRLGMDVPLIG 117 Query: 99 DFHYNGHTLLTEYPECAQALSKYRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNW 158 DFHY GH LL ++P CA+AL+KYRINPGNVG K+D QF +++E+A +YDKPVRIGVNW Sbjct: 118 DFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFGEIVEMAIRYDKPVRIGVNW 177 Query: 159 GSLDQALLARIMDENADRAEPWSAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVS 218 GSLDQ LL +MD N ++ P SA+ V EA+V SA+ +A+ AEE+G+ ++IILS KVS Sbjct: 178 GSLDQELLTTLMDRNKEQGFPLSARQVTREAIVQSALISAELAEEIGLPRNRIILSAKVS 237 Query: 219 GVQDLIAVYRELARRCDYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPE 278 VQDLIAVY L+ R ++ LHLGLTEAGMGSKGIVAS+AA+ +LQ GIGDTIR+SLTPE Sbjct: 238 QVQDLIAVYSMLSERSNHALHLGLTEAGMGSKGIVASSAAMGYVLQHGIGDTIRVSLTPE 297 Query: 279 PGGDRTKEVVVGQEILQTMGLRKFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVW 338 P GDRT+EV V QE+LQ MG R+F P+V ACPGCGRTTSTVFQ+LA IQ +R+ MP+W Sbjct: 298 PNGDRTREVQVAQELLQVMGFRQFIPVVAACPGCGRTTSTVFQELAQNIQNDIRKNMPIW 357 Query: 339 KGKYPGVEAMNVAVMGCIVNGPGESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHI 398 + KYPGVEA+NVAVMGCIVNGPGESKHA+IGISLPGTGESPAAPVFIDGEK +TLRG +I Sbjct: 358 REKYPGVEALNVAVMGCIVNGPGESKHADIGISLPGTGESPAAPVFIDGEKALTLRGPNI 417 Query: 399 AEEFQKVVLDYVESHYGQ 416 A +F+ +V+DY+E +GQ Sbjct: 418 AADFEALVIDYIEKRFGQ 435 >PA3803 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Pae Pseudomonas aeruginosa Length = 371 Score = 219 bits (559), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 148/403 (36%), Positives = 225/403 (55%), Gaps = 57/403 (14%) Query: 7 ASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEV 66 ++ P++RR SR++ + + + VGG AP+ VQSMTNT+T D T QI+ L AG+++ Sbjct: 5 SASPIIRRKSRKIWVGN----VPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADI 60 Query: 67 VRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPG 126 VR++V +AA A I++Q V+VPLV D H++ L L RINPG Sbjct: 61 VRVSVPDMDAAEAFGKIKQQ-----VNVPLVADIHFDYRIALRVAELGVDCL---RINPG 112 Query: 127 NVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQAVM 186 N+G R+ + +++ A + + P+RIGVN GSL++ L + EP Sbjct: 113 NIG----REDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKY-------GEPTP----- 156 Query: 187 YEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAG 246 EAL+ SA+ + ++L K+ S K S V +A YR LAR+ + PLHLG+TEAG Sbjct: 157 -EALLESAMRHVDHLDKLDFQNFKV--SVKASDVFMAVAAYRLLARQIEQPLHLGITEAG 213 Query: 247 MGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMV 306 G V S L +LL EGIGDTIRISL +P +E+ VG +IL+++ LR Sbjct: 214 GLRSGTVKSAVGLGMLLAEGIGDTIRISLAADP----VEEIKVGFDILKSLHLRSRGINF 269 Query: 307 IACPGCGRTTSTVFQ---DLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGES 363 IACP C R V + +L +++ L +P M+VAV+GC+VNGPGE+ Sbjct: 270 IACPSCSRQNFDVVKTMNELEGRLEDLL---VP-----------MDVAVIGCVVNGPGEA 315 Query: 364 KHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVV 406 K A++G+ TG +P V+IDG+ L +++ +E ++++ Sbjct: 316 KEAHVGL----TGGTPNL-VYIDGKPSQKLTNDNLVDELERLI 353