BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0112.p         (312 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr4903 [Q] COG0412 Dienelactone hydrolase and related enzymes M...   144   3e-34
RSc0055 [Q] COG0412 Dienelactone hydrolase and related enzymes R...   132   8e-31
AGl2363 [Q] COG0412 Dienelactone hydrolase and related enzymes A...   117   3e-26
CC0087 Non COG                                                         65   2e-10

>mlr4903 [Q] COG0412 Dienelactone hydrolase and related enzymes Mlo
           Mesorhizobium loti
          Length = 287

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 128/243 (52%), Gaps = 16/243 (6%)

Query: 68  NSKGPYPTVIALHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGRRS 127
             +GP+P V+A+HGC GL+S       E +PRH    R L   GY V+FPDSF  R    
Sbjct: 52  QGQGPFPAVVAMHGCSGLWS--SKNSAELSPRHADWGRRLAALGYVVIFPDSFGSRDLGP 109

Query: 128 TCQDTVAQREISAMNRRF-DVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAET 186
            C++    RE+     R  D  AA R++     V    IALLGWS+G STVL ++   +T
Sbjct: 110 QCKN--GDREVEPYRERVEDANAARRYLQALAYVKPAAIALLGWSNGGSTVLYTVRPKDT 167

Query: 187 DVAVRKIQP--RAAVAFYPDCRPYAKPSEPFKPAAPLLILMGENDDWTPPQACEAIEQKM 244
               +   P  RAAVAFYP C   A+  + +    PLLI+MGE DDWTP + C+A+    
Sbjct: 168 P---KPDSPDFRAAVAFYPGCTAPAEKGD-WATRVPLLIVMGEADDWTPAKPCKALADAN 223

Query: 245 QGSDTELALRLYPDTYHDFDAPGLPVHVRMDVAGVGKRGEGVT-SGANPDARTQAYRSML 303
             S   + L LYP  YHDFD     +H    +A     G+GV  +G NP AR  A + + 
Sbjct: 224 PDS---VKLILYPGAYHDFDNEAQKLHELHGLAYTAN-GDGVAHAGLNPAARAAALKDVP 279

Query: 304 NFL 306
           +FL
Sbjct: 280 DFL 282


>RSc0055 [Q] COG0412 Dienelactone hydrolase and related enzymes Rso
           Ralstonia solanacearum
          Length = 325

 Score =  132 bits (333), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 118/233 (50%), Gaps = 9/233 (3%)

Query: 79  LHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGR-RSTCQDTVAQRE 137
           LHGCGGLY+           R+   A+ L   GY V+ PDSF PRG+    C +  A R 
Sbjct: 94  LHGCGGLYTPAGADAMALGERYRGYAQWLAARGYAVVLPDSFGPRGKPHGICTEPTAGRS 153

Query: 138 ISAMNRRFDVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAETDVAVRKIQPRA 197
           I    RR D+ A +RW+  QP +D + I LLGWS+GA  VL +++ + T  A      R 
Sbjct: 154 IDGAARRADILATLRWIAAQPGLDTRHIVLLGWSNGAQAVLDTVDASRTWPAGTPDVER- 212

Query: 198 AVAFYPDCRPYAKPSEP-FKPAAPLLILMGENDDWTPPQACEAIEQKMQGSDTE--LALR 254
           AVAF P C   A    P ++  APLL+L G  DDWTP   C+A++  +     +   AL 
Sbjct: 213 AVAFDPGC--LAALRRPAYRLNAPLLLLAGAYDDWTPADRCQALQSAVLARQPQARFALE 270

Query: 255 LYPDTYHDFDAPGLPVHVRMDVAGVGKRGEGVTSGANPDARTQAYRSMLNFLD 307
               T H FD    P+  R D+   G R   VT G +P AR  A+  +  +LD
Sbjct: 271 QLGGTDHGFDGTA-PLAPRKDIPD-GARHGTVTIGGDPAAREAAFTQLAAWLD 321


>AGl2363 [Q] COG0412 Dienelactone hydrolase and related enzymes Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 288

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 22/199 (11%)

Query: 71  GPYPTVIALHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGRRSTCQ 130
           GP+P ++ LHGCGGL   +KD           ++  L   GY VL  DSF  R  +STC 
Sbjct: 72  GPFPAIVILHGCGGLGPRLKDD----------VSGRLVSQGYVVLVVDSFATRQMKSTCA 121

Query: 131 DTVAQREISAMNRRFDVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAETDVAV 190
            T      +  +R +D   A+ +++ +P VD  R+AL+G+S G  T L     A     V
Sbjct: 122 TTERDVVFTISDRVYDAYGALDFLSKEPFVDASRVALMGFSAGGVTALT----ATKSGGV 177

Query: 191 RKIQP---RAAVAFYPDCRPYAKPSEPFKPAAPLLILMGENDDWTPPQACEAIEQKMQGS 247
            ++Q    +AA+A+YP C      +   +   P LI+ GE DDW PP  C      +   
Sbjct: 178 EQLQDKKFKAAIAYYPTCS-----ATDGEATVPTLIMAGELDDWGPPAKCRQRLANLSEK 232

Query: 248 DTELALRLYPDTYHDFDAP 266
            +E+ L +YP  +HDFD P
Sbjct: 233 GSEIRLIVYPGAFHDFDVP 251


>CC0087 Non COG
          Length = 252

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 13/118 (11%)

Query: 71  GPYPTVIALHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGRRSTCQ 130
           GP+P  + LHGCGG            TP   A ARV   AG+  +  DS  PRG  +   
Sbjct: 25  GPFPVALILHGCGGK-----------TPFLEAYARVAVQAGWAAVVVDSLKPRGMSTLDA 73

Query: 131 DTVAQREIS--AMNRRFDVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAET 186
                  ++   + R  D+ A + W+ TQ   D  R+ L GWSHG  T++ S  +  +
Sbjct: 74  KLFVCTGVALHGLKRAADIFAMLTWLETQGWADANRVFLAGWSHGGWTIMDSYAVGRS 131