BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0089.p         (419 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0104 [Q] COG2931 RTX toxins and related Ca2+-binding proteins...    71   5e-12

>RSc0104 [Q] COG2931 RTX toxins and related Ca2+-binding proteins Rso
           Ralstonia solanacearum
          Length = 960

 Score = 70.9 bits (172), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 7/126 (5%)

Query: 81  MANAYLDLLAYKAKKA------GMVNSEISYKEAWKFHNSVFEKNGLLPSTWTLDTPLSI 134
           MA AYLD L   A++         VN +I  KE W FH  VF+KNGL    WTLD+    
Sbjct: 1   MARAYLDTLEKIAEENRKLTGNDEVNRDIQAKEVWDFHREVFQKNGLGVENWTLDSVFKT 60

Query: 135 IEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATYGKTPELKQQAKDWLDA 194
           I+++ G  A + YWE+L     + +  T+ ++ T   M + +     P + + A++W++ 
Sbjct: 61  IQQTQGDDALEAYWESLRDTQGEGMMATLLNIRTMYNMHE-SIDSADPAISKLARNWMEL 119

Query: 195 VPNVAS 200
           VP + S
Sbjct: 120 VPGIFS 125