BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0042.p (236 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1118 [V] COG1136 ABC-type antimicrobial peptide transport sys... 298 1e-80 PA2987 [V] COG1136 ABC-type antimicrobial peptide transport syst... 273 2e-73 STM1218 [V] COG1136 ABC-type antimicrobial peptide transport sys... 248 1e-65 NMB1234 [V] COG1136 ABC-type antimicrobial peptide transport sys... 246 4e-65 ZycfV [V] COG1136 ABC-type antimicrobial peptide transport syste... 244 1e-64 ECs1495 [V] COG1136 ABC-type antimicrobial peptide transport sys... 244 1e-64 lolD [V] COG1136 ABC-type antimicrobial peptide transport system... 243 2e-64 YPO1627 [V] COG1136 ABC-type antimicrobial peptide transport sys... 243 2e-64 NMA1402 [V] COG1136 ABC-type antimicrobial peptide transport sys... 243 4e-64 XF1077 [V] COG1136 ABC-type antimicrobial peptide transport syst... 234 2e-61 >RSc1118 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Rso Ralstonia solanacearum Length = 244 Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 150/217 (69%), Positives = 174/217 (80%) Query: 10 AVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSS 69 AVL A+GL K F QG +V VL VDI + GE+VAIVGASGSGKSTLLH+LGGLD P+S Sbjct: 21 AVLQAQGLVKAFRQGGLNVDVLRGVDIRIGVGEKVAIVGASGSGKSTLLHVLGGLDVPTS 80 Query: 70 GTVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQ 129 G VSLLGK F ++ E ER LRN++LGFVYQFHHLLPEF+ALDNVAMPL IR A A+ Sbjct: 81 GRVSLLGKPFTAMSERERNTLRNRALGFVYQFHHLLPEFTALDNVAMPLRIRGENEAQAR 140 Query: 130 EQAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTADR 189 A+ ML +VGL +R H PGELSGGERQRVA+ARALV P+CVLADEPTGNLD TA Sbjct: 141 HTAQAMLARVGLGERTAHRPGELSGGERQRVAIARALVGSPACVLADEPTGNLDDHTAGE 200 Query: 190 TFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSE 226 F+LM+EL+RTLGT+FVIVTHDI+LAGRC R+LRL + Sbjct: 201 VFDLMLELTRTLGTSFVIVTHDIDLAGRCDRILRLRD 237 >PA2987 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Pae Pseudomonas aeruginosa Length = 227 Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 135/226 (59%), Positives = 180/226 (79%) Query: 7 NRQAVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDT 66 N ++VL+ R L K++ +G SV+VL V++++ GE+VAIVG+SGSGKSTLL++LGGLDT Sbjct: 2 NDKSVLSCRNLSKSYDEGPQSVQVLSGVELNLLPGERVAIVGSSGSGKSTLLNMLGGLDT 61 Query: 67 PSSGTVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRA 126 PS+G+V L G++ ++L E+ RG LRN++LGFVYQFHHLLPEF+AL+NV MPL+I R A Sbjct: 62 PSAGSVWLAGEELSALNETARGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTPIA 121 Query: 127 DAQEQAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRST 186 +A+++A E+L +VGL R++H P ELSGGERQRVA+ARALV P VL DEPTGNLD+ T Sbjct: 122 EARQRAAELLERVGLGHRLSHKPAELSGGERQRVAIARALVNRPQLVLLDEPTGNLDQHT 181 Query: 187 ADRTFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQAA 232 A ELM+ELSR+L T+F++VTHD++LAG R+LRL E L AA Sbjct: 182 AQGIQELMLELSRSLQTSFLVVTHDLQLAGHMDRILRLEEGRLIAA 227 >STM1218 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Sty Salmonella typhimurium LT2 Length = 233 Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 126/223 (56%), Positives = 157/223 (70%) Query: 9 QAVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPS 68 + +L L K + +G VL +V + GE +AIVG+SGSGKSTLLHLLGGLDTP+ Sbjct: 3 KILLQCDNLCKRYQEGTVQTDVLHDVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT 62 Query: 69 SGTVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADA 128 SG V G+ + L + + LRNQ LGF+YQFHHLLP+F+AL+NVAMPL+I + K A+ Sbjct: 63 SGDVIFSGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEI 122 Query: 129 QEQAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTAD 188 +AREML VGL R TH P ELSGGERQRVA+ARALV +P VLADEPTGNLD AD Sbjct: 123 DARAREMLHAVGLEHRATHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNAD 182 Query: 189 RTFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQA 231 FEL+ EL+R GTAF++VTHD++LA R R L + + L A Sbjct: 183 SIFELLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 225 >NMB1234 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Nme Neisseria meningitidis MC58 Length = 231 Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 126/222 (56%), Positives = 158/222 (71%) Query: 9 QAVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPS 68 + +L G+GK + G V+VL +D++++ GE I+G+SGSGKSTLLH+LGGLD PS Sbjct: 3 ELILKCEGVGKRYRDGGLDVRVLHGLDLEIHAGESTGIIGSSGSGKSTLLHILGGLDMPS 62 Query: 69 SGTVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADA 128 G V L+G+D +L + G LRN+ LGFVYQFHHLLPEFSAL+NV MPL+I + R +A Sbjct: 63 EGRVLLMGEDLRTLNQRRLGDLRNRHLGFVYQFHHLLPEFSALENVMMPLLIGKKSREEA 122 Query: 129 QEQAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTAD 188 E A ML KVGL R TH GELSGGERQR A+ARALVT P C+LADEPTGNLDR+ A Sbjct: 123 AEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARALVTQPKCLLADEPTGNLDRANAR 182 Query: 189 RTFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQ 230 ++M+EL LGT V+VTHD ELAGR RV+ + + L Sbjct: 183 NVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVMKDGSLH 224 >ZycfV [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component EcZ Escherichia coli O157:H7 EDL933 Length = 228 Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/215 (57%), Positives = 152/215 (70%) Query: 17 LGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSGTVSLLG 76 L K + +G VL NV V GE +AIVG+SGSGKSTLLHLLGGLDTP+SG V G Sbjct: 6 LCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNG 65 Query: 77 KDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQEQAREML 136 + + L + + LRNQ LGF+YQFHHLLP+F+AL+NVAMPL+I + K A+ +A EML Sbjct: 66 QPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEML 125 Query: 137 GKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTADRTFELMIE 196 VGL R H P ELSGGERQRVA+ARALV +P VLADEPTGNLD AD F+L+ E Sbjct: 126 KAVGLEHRANHRPSELSGGERQRVAIARALVNNPWLVLADEPTGNLDARNADSIFQLLGE 185 Query: 197 LSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQA 231 L+R GTAF++VTHD++LA R R L + + L A Sbjct: 186 LNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 220 >ECs1495 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Ecs Escherichia coli O157:H7 Length = 228 Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/215 (57%), Positives = 152/215 (70%) Query: 17 LGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSGTVSLLG 76 L K + +G VL NV V GE +AIVG+SGSGKSTLLHLLGGLDTP+SG V G Sbjct: 6 LCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNG 65 Query: 77 KDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQEQAREML 136 + + L + + LRNQ LGF+YQFHHLLP+F+AL+NVAMPL+I + K A+ +A EML Sbjct: 66 QPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEML 125 Query: 137 GKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTADRTFELMIE 196 VGL R H P ELSGGERQRVA+ARALV +P VLADEPTGNLD AD F+L+ E Sbjct: 126 KAVGLEHRANHRPSELSGGERQRVAIARALVNNPWLVLADEPTGNLDARNADSIFQLLGE 185 Query: 197 LSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQA 231 L+R GTAF++VTHD++LA R R L + + L A Sbjct: 186 LNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 220 >lolD [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Eco Escherichia coli K12 Length = 228 Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 124/215 (57%), Positives = 152/215 (70%) Query: 17 LGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSGTVSLLG 76 L K + +G VL NV V GE +AIVG+SGSGKSTLLHLLGGLDTP+SG V G Sbjct: 6 LCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNG 65 Query: 77 KDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQEQAREML 136 + + L + + LRNQ LGF+YQFHHLLP+F+AL+NVAMPL+I + K A+ +A EML Sbjct: 66 QPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEML 125 Query: 137 GKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTADRTFELMIE 196 VGL R H P ELSGGERQRVA+ARALV +P VLADEPTGNLD AD F+L+ E Sbjct: 126 KAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGE 185 Query: 197 LSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQA 231 L+R GTAF++VTHD++LA R R L + + L A Sbjct: 186 LNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 220 >YPO1627 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Ype Yersinia pestis Length = 234 Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 124/220 (56%), Positives = 157/220 (71%) Query: 11 VLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSG 70 +L L K + +G+ VL NV + GE +AIVG+SGSGKSTLLHLLGGLD+P+SG Sbjct: 6 LLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSPTSG 65 Query: 71 TVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQE 130 V G+ L + + LRN+ LGF+YQFHHLLP+F+AL+NVAMPL+I K A+AQE Sbjct: 66 EVIYQGRSLNQLSSTAKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAEAQE 125 Query: 131 QAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTADRT 190 +A EML VGL +R H P ELSGGERQRVA+AR+LV +PS VLADEPTGNLD+ AD Sbjct: 126 KAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARSLVNNPSLVLADEPTGNLDQRNADSI 185 Query: 191 FELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQ 230 F L+ EL+ GTAF++VTHD++LA R R L + + LQ Sbjct: 186 FNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQ 225 >NMA1402 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component NmA Neisseria meningitidis Z2491 Length = 231 Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 126/222 (56%), Positives = 156/222 (70%) Query: 9 QAVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPS 68 + +L G+GK + G V VL +D+++ GE I+G+SGSGKSTLLH+LGGLD PS Sbjct: 3 ELILKCEGVGKRYRDGGLDVLVLHGLDLEIRAGESTGIIGSSGSGKSTLLHILGGLDMPS 62 Query: 69 SGTVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADA 128 G V L+G+D +L + G LRN+ LGFVYQFHHLLPEFSAL+NV MPL+I + R +A Sbjct: 63 EGRVLLMGEDLRTLNQRRLGDLRNRHLGFVYQFHHLLPEFSALENVMMPLLIGKKSREEA 122 Query: 129 QEQAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTAD 188 E A ML KVGL R TH GELSGGERQR A+ARALVT P C+LADEPTGNLDR+ A Sbjct: 123 AEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARALVTQPKCLLADEPTGNLDRANAR 182 Query: 189 RTFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQ 230 ++M+EL LGT V+VTHD ELAGR RV+ + + L Sbjct: 183 NVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVMKDGSLH 224 >XF1077 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Xfa Xylella fastidiosa 9a5c Length = 227 Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 118/220 (53%), Positives = 155/220 (70%) Query: 11 VLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSG 70 ++ A LGKT+++GK +V +D+ V GE VAIVGASG+GKSTLLHLLGGLD P++G Sbjct: 1 MIRAERLGKTYSEGKLLTQVFDGLDLQVMRGETVAIVGASGAGKSTLLHLLGGLDVPTAG 60 Query: 71 TVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQE 130 V + G+ ++L + +RG LRN++LGF+YQFHHLLPEF+AL+NV MP+++ Q Sbjct: 61 EVYVAGQRMSALSDGDRGRLRNKTLGFIYQFHHLLPEFTALENVMMPVLLSGQSVCSGQM 120 Query: 131 QAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPSCVLADEPTGNLDRSTADRT 190 +A+ +L V L R+ + P ELSGGERQR A+ARAL P CVL DEPTGNLD TA Sbjct: 121 RAQMLLEAVELGHRLNYKPSELSGGERQRAAVARALANSPDCVLGDEPTGNLDNRTASTV 180 Query: 191 FELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQ 230 FELM+EL+R T+ V+VTHD LA RVL L + GL+ Sbjct: 181 FELMLELNRAQRTSLVLVTHDRGLARCLDRVLELYQGGLR 220