BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0026.p (725 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll5270 [R] COG2244 Membrane protein involved in the export of O... 85 5e-16 XF2362 [R] COG2244 Membrane protein involved in the export of O-... 80 2e-14 SMb21050 [R] COG2244 Membrane protein involved in the export of ... 76 4e-13 AGl2565 [R] COG2244 Membrane protein involved in the export of O... 75 4e-13 alr3065 [R] COG2244 Membrane protein involved in the export of O... 75 7e-13 all2290 [R] COG2244 Membrane protein involved in the export of O... 73 2e-12 alr3072 [R] COG2244 Membrane protein involved in the export of O... 72 5e-12 SMb20950 [R] COG2244 Membrane protein involved in the export of ... 68 6e-11 wzxC [R] COG2244 Membrane protein involved in the export of O-an... 64 1e-09 AGl151 [R] COG2244 Membrane protein involved in the export of O-... 64 2e-09 >mll5270 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Mlo Mesorhizobium loti Length = 561 Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 101/212 (47%) Query: 6 HNDLRSKTVKAISHVGLGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIGFFNE 65 LR + + +V + + +VL+RLLSP ++G++ + ++AFI F + Sbjct: 73 EGSLRKSVGRGAVVTAMSQSVRVATQIISVIVLSRLLSPQDFGVVAMCAPVLAFIALFQD 132 Query: 66 IGLTTAIVQRPQLSQEQVNGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMISTLA 125 GLT A +Q+ + E+VN F I + S +L + AA +A F+ +P++ +++ Sbjct: 133 FGLTQATIQKSGIRHEEVNYLFWINVAVSAILACVLAGAAPLVAAFYGEPRVAGLVAAFG 192 Query: 126 VGFIMGAAGSVPEAFLRKQMQFKAMAGITILGIVLQSAVSLGLALAGMGVWSLVWGSLVA 185 + + G+ A L ++MQF +A + + V AVS+ W+L G+L Sbjct: 193 LQIMAYGLGAQHLALLTRRMQFGRLAIVDVASAVAGLAVSIAWTFIDRSYWALFAGTLTG 252 Query: 186 TATYSGGYFLLSPWRPRGRYGVREAVELVLFG 217 + Y+ S WRP V EL+ FG Sbjct: 253 AVLPTLCYWASSRWRPSLPRKVAGIGELINFG 284 >XF2362 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Xfa Xylella fastidiosa 9a5c Length = 510 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 1/187 (0%) Query: 22 LGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIGFFNEIGLTTAIVQRPQLSQE 81 LG ++ S ++LARLL+P +YGLM + ++ + GL++A +Q Q++ Sbjct: 29 LGQGARVVIQFSIIVLLARLLNPHDYGLMAMVTAIVGVADILRDFGLSSAAIQAKQITNA 88 Query: 82 QVNGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMISTLAVGFIMGAAGSVPEAFL 141 Q + F I + L L+ +AA +A F+R+P L + LA+ F++ + A L Sbjct: 89 QRDNLFWINSVIGLALSLVVFVAAQLIADFYREPALVTITQVLAINFLLNGMATQYRANL 148 Query: 142 RKQMQFKAMAGITILGIVLQSAVSLGLALAGMGVWSLVWGSLVATATYSGGYFLLSPWRP 201 ++M+F +A I VL V + +AL G GVW+LV +V + + W P Sbjct: 149 SREMRFGQLALSDIGAQVLGLLVGVSVALVGWGVWALVLQQVVQAVANLVIAMVCARWLP 208 Query: 202 RG-RYGV 207 G R GV Sbjct: 209 GGYRRGV 215 >SMb21050 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Sme Sinorhizobium meliloti Length = 517 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 88/182 (48%) Query: 36 LVLARLLSPAEYGLMEIAMMLIAFIGFFNEIGLTTAIVQRPQLSQEQVNGCFLIAMGCSV 95 ++LAR L P E+GL +AM+ + G+ A+VQR ++ ++ F + + Sbjct: 67 VILARHLGPEEFGLATLAMIAPTILATVVTRGIPDALVQRAEIEPIHLDSAFWLLVATGA 126 Query: 96 VLFLLTLLAAGPLAGFFRQPQLQPMISTLAVGFIMGAAGSVPEAFLRKQMQFKAMAGITI 155 L L AG +A F +P L+ ++ + ++ + +VP A L++++ F+ T+ Sbjct: 127 TLSALIWAFAGVVAEAFGEPLLEDLVRWTGIIVVVQSLAAVPTAVLKRELNFRLFTLRTL 186 Query: 156 LGIVLQSAVSLGLALAGMGVWSLVWGSLVATATYSGGYFLLSPWRPRGRYGVREAVELVL 215 G ++ V L +A+AG G+WSLV + + L S WRPR Y EL Sbjct: 187 TGTMVGGTVGLTMAIAGYGMWSLVLMQVAKAIVETTVILLGSSWRPRMAYSYARCRELFG 246 Query: 216 FG 217 F Sbjct: 247 FA 248 >AGl2565 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 493 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 92/191 (48%) Query: 27 GKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIGFFNEIGLTTAIVQRPQLSQEQVNGC 86 GKL + +VLAR LSP +YG++ A +++ I +E G AIVQ+ L +N Sbjct: 26 GKLFTSILFIVLARFLSPTDYGMVATAGLVLMLIQMISEFGFGDAIVQKRDLEPSDINLP 85 Query: 87 FLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMISTLAVGFIMGAAGSVPEAFLRKQMQ 146 F ++ + +L + + + L +F L P+I + + + A E R+ + Sbjct: 86 FYASVTVATLLAITVCVFSSELERWFEVEGLAPIIVAICILLPLNTASLFQEVNYRRALA 145 Query: 147 FKAMAGITILGIVLQSAVSLGLALAGMGVWSLVWGSLVATATYSGGYFLLSPWRPRGRYG 206 FK +A T + ++ V++ A+ G+GVWSLV + VAT + W P Sbjct: 146 FKPLAIRTFISNIVGGGVAIAFAIMGLGVWSLVVQTYVATIVTLIWLWRKPHWLPSTTLN 205 Query: 207 VREAVELVLFG 217 +R ++L FG Sbjct: 206 LRSFIQLFRFG 216 >alr3065 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Nos Nostoc sp. PCC 7120 Length = 421 Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 2/215 (0%) Query: 5 MHNDLRSKTVKAISHVGLGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIGFFN 64 L +K ++ +G ++ L TT+ LAR+ SP +YGLM + + F F Sbjct: 6 FKQSLSNKFIRNAGALGAAELANRIFRLGTTITLARMFSPQDYGLMAVVYTVFDFATVFT 65 Query: 65 -EIGLTTAIVQRPQLSQEQV-NGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMIS 122 G+ IVQ + + + + + + + +FLL +AA P+A F++ QL I Sbjct: 66 FRGGIGAKIVQADEQDVKTICDTSYWLNWILCIAIFLLQCIAAFPIAQFYKNQQLVLPIC 125 Query: 123 TLAVGFIMGAAGSVPEAFLRKQMQFKAMAGITILGIVLQSAVSLGLALAGMGVWSLVWGS 182 T+ + ++M V A + ++ + K A + +L + + + AL GMGVW++VW Sbjct: 126 TVGLVYLMFPLFLVNSAIIERENRLKITALCNVTQSLLSNIIIVVFALMGMGVWAIVWSM 185 Query: 183 LVATATYSGGYFLLSPWRPRGRYGVREAVELVLFG 217 ++ T + + WRP + + + E++ FG Sbjct: 186 VLTTPVWIIITWRNHSWRPPKLFKLDKYKEVISFG 220 >all2290 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Nos Nostoc sp. PCC 7120 Length = 425 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 2/200 (1%) Query: 3 QTMHNDL-RSKTVKAISHVGLGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIG 61 QT+ L + + ++ I +G V ++ L TT++LAR LS +YGL I +M FI Sbjct: 5 QTLQKRLFQDRFIRNIGWMGAAELVIRVFRLITTVILARFLSAEDYGLAAIVLMTYEFIR 64 Query: 62 FFNEIGLTTAIVQRPQLSQEQV-NGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPM 120 F G+ IVQ E++ + + + VLF+ LA+ +A F+ QL Sbjct: 65 VFTRNGIADKIVQADASEVEELCRTAYGLNWLIAGVLFIAQCLASLAIAQFYNNSQLILP 124 Query: 121 ISTLAVGFIMGAAGSVPEAFLRKQMQFKAMAGITILGIVLQSAVSLGLALAGMGVWSLVW 180 I +A+ +++ V A +R++ + +A IT + + + ++ LAL+GMG+W++V Sbjct: 125 ICLIAITYLIYPLAMVQTALIRRENRLNILALITSVQVSTDNILTAILALSGMGMWAIVL 184 Query: 181 GSLVATATYSGGYFLLSPWR 200 + + F PWR Sbjct: 185 PKFLVAPIWIILTFKYHPWR 204 >alr3072 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Nos Nostoc sp. PCC 7120 Length = 423 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 15/311 (4%) Query: 9 LRSKTVKAISHVGLGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIGFFN-EIG 67 L S+ ++ + +G V ++ L TT+ LAR+ S +YG M + + F F G Sbjct: 10 LSSQFIRNVGWLGTAELVNRIFRLGTTVTLARMFSSQDYGAMALIYTIFEFANVFTLRGG 69 Query: 68 LTTAIVQRPQLSQEQV-NGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMISTLAV 126 + I+Q + + + N F + + + +FL +AA P+A F+ QL I TLA+ Sbjct: 70 IGAKIIQANEQDLKIICNTSFWLNLILGISVFLCQCIAAFPIAQFYGNQQLVWPICTLAI 129 Query: 127 GFIMGAAGSVPEAFLRKQMQFKAMAGITILGIVLQSAVSLGLALAGMGVWSLVWGSLVAT 186 +++ V A + + K A + + + +++ AL GMG+W++V +++T Sbjct: 130 VYLIYPIFMVNSALIERDNHLKITALCNAIQAFVGNVITVVFALLGMGIWAIVLPIVLST 189 Query: 187 ATYSGGYFLLSPWRPRGRYGVREAVELVLFGLCDGASAALLHASADARVRA---MVLVNP 243 + ++ + WRP ++ + + E+ FG +L ++R ++V Sbjct: 190 PVWVVVTWMNNSWRPPTKFSLDKWREVTSFG------KNMLAVEFLNKIRNNLDYLIVGK 243 Query: 244 WARTEAGQAQAYLKHYYRARLTSPDLWNKILRGQFNAVAALRSLLGQW--RRAASPPAAT 301 + TE Q Y + S ++ N + F + A+R L ++ R S Sbjct: 244 FLGTE--QLGIYFFAFNAGSGISINVINTFMSALFPYICAVRENLTEFKQRYFNSLKKIL 301 Query: 302 PELLPIRLQQA 312 ++PI L QA Sbjct: 302 SFVIPIILAQA 312 >SMb20950 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Sme Sinorhizobium meliloti Length = 494 Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 94/183 (51%) Query: 34 TTLVLARLLSPAEYGLMEIAMMLIAFIGFFNEIGLTTAIVQRPQLSQEQVNGCFLIAMGC 93 T +LAR+LSP E+G + +A+ ++ F+ GLT+A+V + E V+ F + Sbjct: 31 TVPILARILSPEEFGAVAVALTVVQFLAMIGGAGLTSALVIQQHEEMETVHSVFWANLAI 90 Query: 94 SVVLFLLTLLAAGPLAGFFRQPQLQPMISTLAVGFIMGAAGSVPEAFLRKQMQFKAMAGI 153 ++++ L + A PLA P+ ++ +++ + G V + L ++M F+ A Sbjct: 91 ALMMALGLFVFAEPLATLLGAPEAAYLLRIMSLLIPLQLGGDVAYSLLVRRMNFRKDAVW 150 Query: 154 TILGIVLQSAVSLGLALAGMGVWSLVWGSLVATATYSGGYFLLSPWRPRGRYGVREAVEL 213 +++ L + +++ LAL G G+WSL+ V+ G + +S + PR + ++ + L Sbjct: 151 SMISESLGAVIAVLLALLGFGIWSLLAQLFVSALVRLSGLYAVSRYAPRFVFSLQRVLAL 210 Query: 214 VLF 216 F Sbjct: 211 SRF 213 >wzxC [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Eco Escherichia coli K12 Length = 492 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%) Query: 8 DLRSKTVKAISHVGLGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIGFFNEIG 67 LR KT+ + + + L VLAR++ ++GL+ +++++IA ++ G Sbjct: 2 SLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDFG 61 Query: 68 LTTAIVQRPQLSQEQVNGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMISTLAVG 127 + +I+QR ++S ++ + + +G +V+ + L + + P L P+I TL++ Sbjct: 62 IANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDLIGDVLNNPDLAPLIKTLSLA 121 Query: 128 FIMGAAGSVPEAFLRKQMQFKAMAGITILGIVLQSAVSLGL--ALAGMGVWSL----VWG 181 F++ G A ++K+++F +G++ SAV G + W L + G Sbjct: 122 FVVIPHGQQFRALMQKELEFNK------IGMIETSAVLAGFTCTVVSAHFWPLAMTAILG 175 Query: 182 SLVATA--TYSGGYFLLSPWRP 201 LV +A T GYF +RP Sbjct: 176 YLVNSAVRTLLFGYFGRKIYRP 197 >AGl151 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 550 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 7/223 (3%) Query: 2 SQTMHNDLRSKTVKAISHVGLGNAVGKLVSLSTTLVLARLLSPAEYGLMEIAMMLIAFIG 61 S +MH K +A L +G ++ + +++RLLSPAE G I + A I Sbjct: 45 SSSMH-----KVRRAFFMAMLEQHLGIAINFALIAIMSRLLSPAEVGFAVIGYGVTAVIF 99 Query: 62 FFNEIGLTTAIVQRPQLSQEQVNGCFLIAMGCSVVLFLLTLLAAGPLAGFFRQPQLQPMI 121 F E + ++Q + ++ +N + + S +L ++ L LA F+ QP LQ + Sbjct: 100 AFREFVSSDFLIQLDVVERDDINTSLTLLLLVSGILGVVLYLCGPYLALFYHQPGLQHYL 159 Query: 122 STLAVGFIMGAAGSVPE-AFLRKQMQFKAMAGITILGIVLQSAVSLGLALAGMGVWSLVW 180 LA+ +M + +P + LR+++ F +A + +G+V+ + V++ A G G S Sbjct: 160 -VLAIAAVMAESLGMPAFSMLRRRLAFGTIARVRTIGLVVMAVVTIFAARNGWGFVSFAL 218 Query: 181 GSLVATATYSGGYFLLSPWRPRGRYGVREAVELVLFGLCDGAS 223 G LV + S P + R ++ + FG GA+ Sbjct: 219 GLLVGNSVASALAAYADPAQRSARLSLKSWRRMAEFGRYRGAA 261