BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0064.p (204 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PM2000 [I] COG0558 Phosphatidylglycerophosphate synthase Pmu Pas... 215 6e-56 PA2541 [I] COG0558 Phosphatidylglycerophosphate synthase Pae Pse... 196 2e-50 YPO2817 [I] COG0558 Phosphatidylglycerophosphate synthase Ype Ye... 165 5e-41 Z2319 [I] COG0558 Phosphatidylglycerophosphate synthase EcZ Esch... 155 5e-38 ECs2010 [I] COG0558 Phosphatidylglycerophosphate synthase Ecs Es... 155 5e-38 ynbA [I] COG0558 Phosphatidylglycerophosphate synthase Eco Esche... 144 2e-34 FN1307 [I] COG0558 Phosphatidylglycerophosphate synthase Fnu Fus... 141 1e-33 >PM2000 [I] COG0558 Phosphatidylglycerophosphate synthase Pmu Pasteurella multocida Length = 218 Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 110/202 (54%), Positives = 144/202 (71%), Gaps = 1/202 (0%) Query: 2 ISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLLL 61 +SIY LKP+FQ LLRP V LA GV+AN VT+LA +S+ LG L A LF+L+ Sbjct: 1 MSIYDLKPKFQNLLRPTVVKLAQRGVSANQVTLLACAISVVLGLFL-TALAEVHWLFILI 59 Query: 62 PLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVGA 121 P+W+F+RMA NA+DGMLAREF Q+S LG YLNE+TDV SDAALYLPFA + PF +G Sbjct: 60 PIWLFIRMALNAIDGMLAREFHQKSRLGGYLNEITDVVSDAALYLPFACIFPFDPLLIGL 119 Query: 122 LIFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGALPDWIFWALPL 181 +I+L+A++E+ G LG + G R+YDGP+GKSDRAFLFG LGL LP+W++W L Sbjct: 120 IIWLAALTELCGILGQVQGQTRRYDGPLGKSDRAFLFGVLGLAYTFYAPLPEWLYWVAWL 179 Query: 182 AAVAILLNIVNRIRSGLAALPR 203 + ++L + R+R+GLA LP Sbjct: 180 VVLLLILTCIKRVRAGLAELPN 201 >PA2541 [I] COG0558 Phosphatidylglycerophosphate synthase Pae Pseudomonas aeruginosa Length = 211 Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 122/202 (60%), Positives = 144/202 (71%), Gaps = 3/202 (1%) Query: 1 MISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLL 60 MIS+YQLKPRFQ LLRP V L G+TAN VT+ A L+SL +GAL+ AS LF L Sbjct: 1 MISVYQLKPRFQNLLRPGVQRLYQRGITANQVTLAACLLSLLVGALV-AGFASHLWLFAL 59 Query: 61 LPLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVG 120 +PLWMFLRMA NAVDGMLAREFGQ+S LGAYLNELTDV +D+ LYLPFAL+ V Sbjct: 60 VPLWMFLRMALNAVDGMLAREFGQKSDLGAYLNELTDVIADSGLYLPFALLPGVNPLWVV 119 Query: 121 ALIFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGALP-DWIFWAL 179 ++ L+ +SE GALG MVGA R+YDGPMGKSDRA FG +G + +G LP WI W + Sbjct: 120 LVVLLAVISEYAGALGTMVGASRRYDGPMGKSDRALCFGVIGAGVA-SGLLPLAWIDWLM 178 Query: 180 PLAAVAILLNIVNRIRSGLAAL 201 L A +LL I NR+R GLA L Sbjct: 179 LLIAALLLLTIGNRVRQGLAEL 200 >YPO2817 [I] COG0558 Phosphatidylglycerophosphate synthase Ype Yersinia pestis Length = 200 Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 8/200 (4%) Query: 2 ISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLLL 61 +++Y +KP+FQ LLRP+V L GVTAN +T+LAML S+ LG WL +P LF+ L Sbjct: 1 MTLYDIKPQFQNLLRPLVVRLHARGVTANQITLLAMLTSVLLGG--WLICFPQPVLFISL 58 Query: 62 PLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVGA 121 P+++F RMA NA+DGMLAREF QQS LGA LNE+ D+ SDAALYL FA ++ V Sbjct: 59 PVFLFFRMALNAIDGMLAREFNQQSTLGAILNEVGDIISDAALYLAFAFLSGVSPWLVIL 118 Query: 122 LIFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGALPDWI-FWALP 180 ++ LS ++E G + + R Y GP+GKSDRAF+ GALGL++ L P +I + Sbjct: 119 VVLLSWLTEFCGVIAQTLTGIRNYRGPLGKSDRAFVLGALGLFIAL---WPQYIGVTNIV 175 Query: 181 LAAVAILL--NIVNRIRSGL 198 A+LL +NR RS + Sbjct: 176 FGVTALLLVWTCINRCRSAI 195 >Z2319 [I] COG0558 Phosphatidylglycerophosphate synthase EcZ Escherichia coli O157:H7 EDL933 Length = 203 Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 10/202 (4%) Query: 1 MISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLL 60 ++++YQ+KP FQ+LLRP + L VTAN +T+ A+ +SL G LL L ++P LFLL Sbjct: 2 IMTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLITGLLLML--VAQPILFLL 59 Query: 61 LPLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVG 120 LP+ +F+RMA NA+DGMLARE QQ+ LGA LNE DV SD ALYLPF + V Sbjct: 60 LPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVI 119 Query: 121 ALIFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGAL-PDWIFWA- 178 ++F + ++E G L + R Y GP GKSDRA +F GLW GLA A+ P W+ W Sbjct: 120 LMLFCTILTEFCGLLAQTINGIRSYVGPFGKSDRALIF---GLW-GLAVAIYPQWMQWNN 175 Query: 179 --LPLAAVAILLNIVNRIRSGL 198 +A++ +L +NR RS L Sbjct: 176 LLWSIASILLLWTAINRCRSVL 197 >ECs2010 [I] COG0558 Phosphatidylglycerophosphate synthase Ecs Escherichia coli O157:H7 Length = 203 Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 10/202 (4%) Query: 1 MISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLL 60 ++++YQ+KP FQ+LLRP + L VTAN +T+ A+ +SL G LL L ++P LFLL Sbjct: 2 IMTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLITGLLLML--VAQPILFLL 59 Query: 61 LPLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVG 120 LP+ +F+RMA NA+DGMLARE QQ+ LGA LNE DV SD ALYLPF + V Sbjct: 60 LPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVI 119 Query: 121 ALIFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGAL-PDWIFWA- 178 ++F + ++E G L + R Y GP GKSDRA +F GLW GLA A+ P W+ W Sbjct: 120 LMLFCTILTEFCGLLAQTINGIRSYVGPFGKSDRALIF---GLW-GLAVAIYPQWMQWNN 175 Query: 179 --LPLAAVAILLNIVNRIRSGL 198 +A++ +L +NR RS L Sbjct: 176 LLWSIASILLLWTAINRCRSVL 197 >ynbA [I] COG0558 Phosphatidylglycerophosphate synthase Eco Escherichia coli K12 Length = 203 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 10/202 (4%) Query: 1 MISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLL 60 ++++YQ+KP FQ+LLRP + L VTAN +T+ A+ +SL G LL A++P LFLL Sbjct: 2 IMTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLL--MLAAQPILFLL 59 Query: 61 LPLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVG 120 LP+ +F+RMA NA+DGMLARE QQ+ LGA LNE DV SD ALYLPF + V Sbjct: 60 LPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVI 119 Query: 121 ALIFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGAL-PDWIFWA- 178 ++F + ++E G L + R Y GP GKSDRA +F GLW GLA A+ P W+ W Sbjct: 120 LMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIF---GLW-GLAVAIYPQWMQWNN 175 Query: 179 --LPLAAVAILLNIVNRIRSGL 198 +A++ +L +NR RS L Sbjct: 176 LLWSIASILLLWTAINRCRSVL 197 >FN1307 [I] COG0558 Phosphatidylglycerophosphate synthase Fnu Fusobacterium nucleatum Length = 199 Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 118/199 (59%), Gaps = 7/199 (3%) Query: 2 ISIYQLKPRFQALLRPMVAALAGAGVTANAVTVLAMLVSLGLGALLWLEGASRPALFLLL 61 ISIY+LK +FQ LL P+ L +T N +TV +L+++ +++ + ++ L+L + Sbjct: 3 ISIYKLKTKFQNLLMPICEKLVKLKITPNQITVTTVLLNIIFAGIIY-KFSNYNFLYLTI 61 Query: 62 PLWMFLRMAFNAVDGMLAREFGQQSALGAYLNELTDVFSDAALYLPFALVAPFGWGSVGA 121 P+++FLRMA NA+DGM+A +F Q++ +G + NE+ DV SD + F V G V Sbjct: 62 PVFLFLRMALNALDGMIANKFNQKTKIGVFYNEVGDVVSDTVFFYIFLRVI--GINEVYN 119 Query: 122 L--IFLSAVSEMTGALGPMVGAPRQYDGPMGKSDRAFLFGALGLWLGLAGALPDWIFWAL 179 L IFLSA+SE G + MV R Y+GPMGKSDRAFL L + G + + L Sbjct: 120 LLFIFLSALSEYIGVVAVMVDNKRHYEGPMGKSDRAFLISLLAIIYFFIG--NQYFDYIL 177 Query: 180 PLAAVAILLNIVNRIRSGL 198 L+ + ++ I NR++S L Sbjct: 178 ILSIILLIFTIYNRVKSSL 196