BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0292.p (355 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2901 [J] COG0216 Protein chain release factor A Rso Ralstonia... 579 e-165 NMB1686 [J] COG0216 Protein chain release factor A Nme Neisseria... 558 e-159 NMA1945 [J] COG0216 Protein chain release factor A NmA Neisseria... 555 e-158 HI1561 [J] COG0216 Protein chain release factor A Hin Haemophilu... 466 e-131 PM0555 [J] COG0216 Protein chain release factor A Pmu Pasteurell... 466 e-131 ZprfA [J] COG0216 Protein chain release factor A EcZ Escherichia... 457 e-128 prfA [J] COG0216 Protein chain release factor A Eco Escherichia ... 456 e-128 ECs1716 [J] COG0216 Protein chain release factor A Ecs Escherich... 456 e-128 STM1776 [J] COG0216 Protein chain release factor A Sty Salmonell... 456 e-128 PA4665 [J] COG0216 Protein chain release factor A Pae Pseudomona... 454 e-127 >RSc2901 [J] COG0216 Protein chain release factor A Rso Ralstonia solanacearum Length = 360 Score = 579 bits (1493), Expect = e-165, Method: Compositional matrix adjust. Identities = 277/355 (78%), Positives = 318/355 (89%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 ML+KLDQLAER E+N+LLA+EDATA++D +RK+TREHAEL P+VA Y + QA +D+ T Sbjct: 5 MLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVTT 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 AQELLADPDMKAFA++EI A+ RM LE +LQ++LLPKDPND RNIFLEIRAGTGGDES Sbjct: 65 AQELLADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDES 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDLLRMYTRYAERQRWQVEIVS S S+LGGYKEVI R+VG GAYSRLKFESGGHRV Sbjct: 125 ALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE QGRIHTSACTVAVMPEAD + D++INPAD+RIDT+RASGAGGQHINKTDSAV Sbjct: 185 QRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAV 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 R+THLPTG+VVECQDDRSQH+NK +AM+VLAAR+KD Q R+ Q++EA+ RKSLIGSGDRS Sbjct: 245 RLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGDD 355 +RIRTYNFPQGR+TDHRINLTLYK+D +MDGDL EL AL EHQAE LA LG++ Sbjct: 305 DRIRTYNFPQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQAEQLAALGEE 359 >NMB1686 [J] COG0216 Protein chain release factor A Nme Neisseria meningitidis MC58 Length = 358 Score = 558 bits (1438), Expect = e-159, Method: Compositional matrix adjust. Identities = 272/354 (76%), Positives = 319/354 (90%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 +L KL QL++RLEE+ LL Q +AT+ MDN+RK+TREHAEL P+V ++ Y A D+ Sbjct: 5 ILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLAD 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 A+E+L+DP+MK FA EEI+ AKA++ L+ +LQK+LLPKD +D++NIF+EIRAGTGGDE+ Sbjct: 65 AEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDLLRMY+RYAER RWQVEIVSA+ESELGGYKEVIARIVGLGAYSRLKFESGGHRV Sbjct: 125 ALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE+QGRIHTSACTVAVMPEADE+ D+E+NPAD+RIDT+RASGAGGQHINKTDSAV Sbjct: 185 QRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAV 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITHLPTG+VVECQD RSQH NKAQAMKVLAAR+ D Q R+ Q++EAA RKSLIGSGDRS Sbjct: 245 RITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 ERIRTYN+PQGR+TDHRINLTL+KLDF+MDGDL+E+TNALI EHQAELLA +GD Sbjct: 305 ERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAMGD 358 >NMA1945 [J] COG0216 Protein chain release factor A NmA Neisseria meningitidis Z2491 Length = 358 Score = 555 bits (1431), Expect = e-158, Method: Compositional matrix adjust. Identities = 271/354 (76%), Positives = 317/354 (89%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 +L KL QL +RLEE+ LL Q +AT+ MDN+RK+TREHAEL P+V ++ Y A D+ Sbjct: 5 ILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLAD 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 A+E+L+DP+MK FA EEI+ AKA++ L+ +LQK+LLPKD +D++NIF+EIRAGTGGDE+ Sbjct: 65 AEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDLLRMY+RYAER RWQVEIVSA+ESELGGYKEVIARI+GLGAYSRLKFESGGHRV Sbjct: 125 ALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE+QGRIHTSACTVAVMPEADE+ D+E+NPAD+RIDT+RASGAGGQHINKTDSAV Sbjct: 185 QRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAV 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITHLPTG+VVECQD RSQH NKAQAMKVLAAR+ D Q R+ Q++EAA RKSLIGSGDRS Sbjct: 245 RITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 ERIRTYN+PQGR+TDHRINLTL+KLDF+MDGDL E+TNALI EHQAELLA +GD Sbjct: 305 ERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQAELLAAMGD 358 >HI1561 [J] COG0216 Protein chain release factor A Hin Haemophilus influenzae Length = 361 Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust. Identities = 218/354 (61%), Positives = 281/354 (79%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 ++AKL+ L ER EEL +LL + D FR ++E+++L +V ++ + Q ++I Sbjct: 6 IIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEE 65 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 A+ LL DP+MK AQ EI+ +KA +E +E LQ +LLPKDPNDE N +LEIRAGTGGDE+ Sbjct: 66 AEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEA 125 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 +FAGDL RMY+RYAE +RW+VE++SA+ESE GGYKEVI ++ G G Y +LKFESGGHRV Sbjct: 126 GIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRV 185 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVP TE+QGRIHTSACTVAVMPE E EINPAD+RIDTYR+SGAGGQH+N TDSAV Sbjct: 186 QRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITH+PTGIVVECQD+RSQHKNKA+AM VLA+RI + +Q +E+ R++L+GSGDRS Sbjct: 246 RITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRS 305 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 ++IRTYN+PQGR+TDHRINLT+Y+LD +M+G +DEL +ITE+QA+ LA L + Sbjct: 306 DKIRTYNYPQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQADQLAALSE 359 >PM0555 [J] COG0216 Protein chain release factor A Pmu Pasteurella multocida Length = 360 Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust. Identities = 217/354 (61%), Positives = 279/354 (78%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 +++KL+ L ER EEL +LL + + D FR ++E+A+L +V + + Q ++ Sbjct: 5 IISKLESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNSNMEE 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 AQ LL DP MK AQEEI+ K +E +E LQ +LLPKDPNDE N +LEIRAGTGGDE+ Sbjct: 65 AQLLLDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 +FAGDL RMY+RYAE +RW+VE++SA+ESE GGYKE+I ++ G G Y +LKFESGGHRV Sbjct: 125 GIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVP TE+QGRIHTSACTVAVMPE E EINP+D+RIDTYR+SGAGGQH+N TDSAV Sbjct: 185 QRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAV 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITH+PTGIVVECQD+RSQHKNKA+AM VLA+RI + +Q+ +A TR++L+GSGDRS Sbjct: 245 RITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 ++IRTYN+PQGR+TDHRINLT+Y+LD +M+G +DEL +ITE+QA+ LA L + Sbjct: 305 DKIRTYNYPQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQADQLAALSE 358 >ZprfA [J] COG0216 Protein chain release factor A EcZ Escherichia coli O157:H7 EDL933 Length = 360 Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust. Identities = 226/354 (63%), Positives = 283/354 (79%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 ++AKL+ L ER EE+ +LL A + FR ++RE+A+L + + ++ Q EDI T Sbjct: 5 IVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSPCFTDWQQVQEDIET 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 AQ +L DP+M+ AQ+E+ AK + E LE LQ +LLPKDP+DERN FLE+RAGTGGDE+ Sbjct: 65 AQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDL RMY+RYAE +RW+VEI+SASE E GGYKE+IA+I G G Y RLKFESGGHRV Sbjct: 125 ALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE+QGRIHTSACTVAVMPE + +INPAD+RIDT+R+SGAGGQH+N TDSA+ Sbjct: 185 QRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAI 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITHLPTGIVVECQD+RSQHKNKA+A+ VL ARI ++ ++Q EA+TR++L+GSGDRS Sbjct: 245 RITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 +R RTYNFPQGR+TDHRINLTLY+LD +M+G LD L +I EHQA+ LA L + Sbjct: 305 DRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358 >prfA [J] COG0216 Protein chain release factor A Eco Escherichia coli K12 Length = 360 Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust. Identities = 226/354 (63%), Positives = 283/354 (79%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 ++AKL+ L ER EE+ +LL A + FR ++RE+A+L + + ++ Q EDI T Sbjct: 5 IVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIET 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 AQ +L DP+M+ AQ+E+ AK + E LE LQ +LLPKDP+DERN FLE+RAGTGGDE+ Sbjct: 65 AQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDL RMY+RYAE +RW+VEI+SASE E GGYKE+IA+I G G Y RLKFESGGHRV Sbjct: 125 ALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE+QGRIHTSACTVAVMPE + +INPAD+RIDT+R+SGAGGQH+N TDSA+ Sbjct: 185 QRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAI 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITHLPTGIVVECQD+RSQHKNKA+A+ VL ARI ++ ++Q EA+TR++L+GSGDRS Sbjct: 245 RITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 +R RTYNFPQGR+TDHRINLTLY+LD +M+G LD L +I EHQA+ LA L + Sbjct: 305 DRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358 >ECs1716 [J] COG0216 Protein chain release factor A Ecs Escherichia coli O157:H7 Length = 360 Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust. Identities = 226/354 (63%), Positives = 283/354 (79%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 ++AKL+ L ER EE+ +LL A + FR ++RE+A+L + + ++ Q EDI T Sbjct: 5 IVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIET 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 AQ +L DP+M+ AQ+E+ AK + E LE LQ +LLPKDP+DERN FLE+RAGTGGDE+ Sbjct: 65 AQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDL RMY+RYAE +RW+VEI+SASE E GGYKE+IA+I G G Y RLKFESGGHRV Sbjct: 125 ALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE+QGRIHTSACTVAVMPE + +INPAD+RIDT+R+SGAGGQH+N TDSA+ Sbjct: 185 QRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAI 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITHLPTGIVVECQD+RSQHKNKA+A+ VL ARI ++ ++Q EA+TR++L+GSGDRS Sbjct: 245 RITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 +R RTYNFPQGR+TDHRINLTLY+LD +M+G LD L +I EHQA+ LA L + Sbjct: 305 DRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358 >STM1776 [J] COG0216 Protein chain release factor A Sty Salmonella typhimurium LT2 Length = 360 Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust. Identities = 227/354 (64%), Positives = 281/354 (79%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 ++AKL+ L ER EE+ +LL A D FR ++RE+A+L + + ++ Q +DI T Sbjct: 5 IVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIET 64 Query: 61 AQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120 AQ +L DP+M+ AQEE+ AK + E LE LQ +LLPKDP+DERN FLE+RAGTGGDE+ Sbjct: 65 AQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEA 124 Query: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRV 180 ALFAGDL RMY+RYAE +RW+VEI+S SE E GGYKE+IA+I G G Y RLKFESGGHRV Sbjct: 125 ALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRV 184 Query: 181 QRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAV 240 QRVPATE+QGRIHTSACTVAVMPE E +INPAD+RIDT+R+SGAGGQH+N TDSA+ Sbjct: 185 QRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAI 244 Query: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRS 300 RITHLPTGIVVECQD+RSQHKNKA+A+ VL ARI + ++Q EA+TR++L+GSGDRS Sbjct: 245 RITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRS 304 Query: 301 ERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 +R RTYNFPQGR+TDHRINLTLY+LD M+G LD L ++ EHQA+LLA L + Sbjct: 305 DRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSE 358 >PA4665 [J] COG0216 Protein chain release factor A Pae Pseudomonas aeruginosa Length = 360 Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust. Identities = 216/356 (60%), Positives = 279/356 (78%), Gaps = 2/356 (0%) Query: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRT 60 +L KLD L++R EEL +LL + + FR +RE+AE+ P++ + +Y + D+ Sbjct: 5 LLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEG 64 Query: 61 AQELL--ADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGD 118 AQ LL +DP+++ A+EE+ A+ R+ L LQ+MLLPKDPND RN+FLEIRAGTGGD Sbjct: 65 AQALLKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGD 124 Query: 119 ESALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGH 178 E+A+F+GDL RMY+RYAERQ W++E +S +E E GGYKEVIAR+ G Y++LKFESG H Sbjct: 125 EAAIFSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAH 184 Query: 179 RVQRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDS 238 RVQRVP TE+QGRIHTSACTVAV+PE DE +EINPAD+R+DTYR+SGAGGQH+NKTDS Sbjct: 185 RVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDS 244 Query: 239 AVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGD 298 AVRITH+P+GIVVECQ++RSQHKN+A+AM LAA++ D Q Q A+TRK L+GSGD Sbjct: 245 AVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLVGSGD 304 Query: 299 RSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQAELLAQLGD 354 RSERIRTYNFPQGR+TDHRINLTLY L +M+G ++++ L+ E+QA+ LA LGD Sbjct: 305 RSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAALGD 360