BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0272.p (244 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa1652 [E] COG4126 Hydantoin racemase Sme Sinorhizobium meliloti 264 1e-70 AGl3449 [E] COG4126 Hydantoin racemase Atu Agrobacterium tumefac... 247 2e-65 mll8441 Non COG 244 1e-64 SMc02427 [E] COG4126 Hydantoin racemase Sme Sinorhizobium meliloti 221 9e-58 AGl353 [E] COG4126 Hydantoin racemase Atu Agrobacterium tumefaci... 218 7e-57 SPAC1F7.10 [E] COG4126 Hydantoin racemase Spo Schizosaccharomyce... 93 6e-19 SPCC576.02 [E] COG4126 Hydantoin racemase Spo Schizosaccharomyce... 74 4e-13 SMc04361 [E] COG4126 Hydantoin racemase Sme Sinorhizobium meliloti 66 6e-11 >SMa1652 [E] COG4126 Hydantoin racemase Sme Sinorhizobium meliloti Length = 261 Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/242 (56%), Positives = 172/242 (71%), Gaps = 2/242 (0%) Query: 1 MRIKLINPNTTWSMTEAMTACARQVAAAGTEVTGVSPEMGPASIESHYDEALAVPGLLQE 60 M IKLINPNTT +MTE M AR VAAAG+++ + G ASIE HYDEAL++ G++ E Sbjct: 1 MLIKLINPNTTSAMTELMGDTARTVAAAGSDIVLATSRSGAASIEGHYDEALSILGVIDE 60 Query: 61 IERGERDGYDAYVIACFGDPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLART 120 I RG+ DAY+I CFGDPGL AARE+ PV+G+AE+AMH A+ +A SFS++TTL RT Sbjct: 61 IARGKP--ADAYIIGCFGDPGLLAAREITASPVLGVAESAMHAATFVATSFSIITTLERT 118 Query: 121 SGMAWHLAERYGMQRFCRNVRACEIAVLELEDPASDARARITDECRRALAEDGAEAIVLG 180 ++ L YGMQ CR+VRA ++ VLELE +S A A I EC +AL ED A+AIVLG Sbjct: 119 RIISERLVRSYGMQNHCRSVRATDVPVLELERSSSTADAAILAECEKALIEDRAQAIVLG 178 Query: 181 CAGMAELCAAIGRDIGAPVIDGVTAAVKLAESLVALGLGTAKRGELARPLPKAYHGLLRE 240 CAGM+ L + +G PVIDGV AAVK AE +V +GL T+K G+LA PLPKAY G L E Sbjct: 179 CAGMSNLVERLQHRLGVPVIDGVAAAVKFAEGIVGMGLRTSKVGDLAYPLPKAYAGKLAE 238 Query: 241 FA 242 +A Sbjct: 239 YA 240 >AGl3449 [E] COG4126 Hydantoin racemase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 247 Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/241 (55%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 1 MRIKLINPNTTWSMTEAMTACARQVAAAGTEVTGVSPEMGPASIESHYDEALAVPGLLQE 60 MRI ++NPNTT SMT + A +V TE+ GV+ MGP SIE +YDE AVPGLL E Sbjct: 1 MRILVVNPNTTRSMTATIADAAMRVVGRDTEILGVTSSMGPVSIEGYYDEVFAVPGLLLE 60 Query: 61 IERGERDGYDAYVIACFGDPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLART 120 + + G DA VIACF D GL AAR PVIG+ EAA+ + IA F++VTT+ R+ Sbjct: 61 LAKAPALGVDAAVIACFDDTGLDAARAFCDIPVIGLCEAAVSATAFIAQKFTIVTTMERS 120 Query: 121 SGMAWHLAERYGMQRFCRNVRACEIAVLELEDPASDARARITDECRRALAEDGAEAIVLG 180 HL RYGM C NVRA +I VL LEDPAS+AR R+ E AL ED AEAIVLG Sbjct: 121 RLPLEHLVHRYGMSARC-NVRAADIPVLSLEDPASNARERLRQEIALALKEDRAEAIVLG 179 Query: 181 CAGMAELCAAIGRDIGAPVIDGVTAAVKLAESLVALGLGTAKRGELARPLPKAYHGLLRE 240 CAGMA+L A + + G PV+DGV AAVK AESLV++GL TAK G A+P+ K YHGLL Sbjct: 180 CAGMADLTAELRAEFGVPVVDGVAAAVKQAESLVSMGLSTAKSGAYAKPVAKPYHGLLEA 239 Query: 241 F 241 F Sbjct: 240 F 240 >mll8441 Non COG Length = 250 Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 141/242 (58%), Positives = 168/242 (69%), Gaps = 1/242 (0%) Query: 1 MRIKLINPNTTWSMTEAMTACARQVAAAGTEVTGVSPEMGPASIESHYDEALAVPGLLQE 60 ++I ++NPNTT SMTE + A AR VA A TE+ V+ GP SIE +YDEALAVPGLL E Sbjct: 3 VQILVVNPNTTASMTETIGAAARAVAGAWTEIIAVTSSTGPDSIEGYYDEALAVPGLLME 62 Query: 61 IERGERDGYDAYVIACFGDPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLART 120 I GER G A VIACF D GL AAR +A PVIGI EAA+ MAS IA F+VVTT R+ Sbjct: 63 IAAGERRGAQAAVIACFDDTGLDAARAMANIPVIGICEAALSMASFIAQRFTVVTTTERS 122 Query: 121 SGMAWHLAERYGMQRFCRNVRACEIAVLELEDPASDARARITDECRRALAEDGAEAIVLG 180 L +RYGM R VRA +I VL LEDPAS A ++ DE RA+ ED AEAIVLG Sbjct: 123 RVPVEGLVQRYGMAGRAR-VRAADIPVLALEDPASGATGKLRDEIARAVEEDRAEAIVLG 181 Query: 181 CAGMAELCAAIGRDIGAPVIDGVTAAVKLAESLVALGLGTAKRGELARPLPKAYHGLLRE 240 CAGMA+L + D G PVIDGV AA+K AE+L+ALGL T+KRG A PL K+Y G+L+ Sbjct: 182 CAGMADLAHQLQADFGLPVIDGVGAAIKQAEALIALGLSTSKRGAYASPLAKSYRGMLKS 241 Query: 241 FA 242 F+ Sbjct: 242 FS 243 >SMc02427 [E] COG4126 Hydantoin racemase Sme Sinorhizobium meliloti Length = 241 Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 124/236 (52%), Positives = 152/236 (64%) Query: 1 MRIKLINPNTTWSMTEAMTACARQVAAAGTEVTGVSPEMGPASIESHYDEALAVPGLLQE 60 M I LINPN+T SMT A V A T V+ +P PASIE DEA++VPG+L E Sbjct: 1 MHIHLINPNSTASMTAQALESALLVKHAHTHVSASNPTDTPASIEGGADEAMSVPGMLAE 60 Query: 61 IERGERDGYDAYVIACFGDPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLART 120 I +GE G DAYVIACF DPGL AARE+A+GPVIGI +AA+ +A I+ FSV+TTL R+ Sbjct: 61 IRQGEAQGVDAYVIACFDDPGLHAAREVAKGPVIGICQAAVQVAMTISRRFSVITTLPRS 120 Query: 121 SGMAWHLAERYGMQRFCRNVRACEIAVLELEDPASDARARITDECRRALAEDGAEAIVLG 180 + L YG +R CR VRA ++ VL LE+ A + E A AEDGAEAIVLG Sbjct: 121 VPIIEDLVSDYGAERHCRKVRAIDLPVLALEEDPQRAERLLLKEIEIAKAEDGAEAIVLG 180 Query: 181 CAGMAELCAAIGRDIGAPVIDGVTAAVKLAESLVALGLGTAKRGELARPLPKAYHG 236 CAGM+ LC + + G PVIDGVTAAVK+AE+L+ G T+K A P KA G Sbjct: 181 CAGMSSLCDRLQKATGVPVIDGVTAAVKMAEALLGAGYATSKVNTYAYPRIKAAAG 236 >AGl353 [E] COG4126 Hydantoin racemase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 119/222 (53%), Positives = 147/222 (66%) Query: 1 MRIKLINPNTTWSMTEAMTACARQVAAAGTEVTGVSPEMGPASIESHYDEALAVPGLLQE 60 M I+LINPN+T SMT A +V T V+ +P P SIE DEA+AVPGLL E Sbjct: 4 MHIRLINPNSTASMTAQALDSALRVKQKDTHVSAANPVDTPVSIEGQADEAMAVPGLLAE 63 Query: 61 IERGERDGYDAYVIACFGDPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLART 120 I +GE G DAYVIACF DPGL AARE+A+GPVIGI +AA+ +A I+ FS++TTL R+ Sbjct: 64 IRKGEGHGVDAYVIACFDDPGLHAAREVARGPVIGICQAAVQVAMTISRRFSIITTLPRS 123 Query: 121 SGMAWHLAERYGMQRFCRNVRACEIAVLELEDPASDARARITDECRRALAEDGAEAIVLG 180 + L E YG QR+CR VRA ++ VL LE+ A A + E A ED AEAI+LG Sbjct: 124 IPIIEDLVEDYGAQRYCRKVRAIDLPVLGLEEDPEVAEALLRREIEAAKREDAAEAIILG 183 Query: 181 CAGMAELCAAIGRDIGAPVIDGVTAAVKLAESLVALGLGTAK 222 CAGM+ LC + G PVIDGVTAA+KLAE+LV G T+K Sbjct: 184 CAGMSSLCDRLRDATGVPVIDGVTAAIKLAEALVGAGYTTSK 225 >SPAC1F7.10 [E] COG4126 Hydantoin racemase Spo Schizosaccharomyces pombe Length = 238 Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 7/230 (3%) Query: 1 MRIKLINPNTTWSMTEAMTACARQVAAAGTEVTGVS-PEMGPASIESHYDEALAVPGLLQ 59 +RI +INPN+T MTE++ + ++ ++ P GP +IE D + L++ Sbjct: 2 IRILVINPNSTVQMTESVKSVLDDCTPPNVQLEYLTCPPEGPKAIECVSDGVRSAAVLMK 61 Query: 60 EIERGERDGYDAYVIACFGD-PGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLA 118 E DA++++C+ D P ++ RE + P GI +A++ A + SVVTT Sbjct: 62 YFE-DHPPQVDAFLVSCYSDHPLVTTLRETYRKPCTGIMQASILTALSLGRKVSVVTTTK 120 Query: 119 RTSGMAWHLAERYGM-QRFCRNVRACEIAVLELED-PASDARARITDECRRALAEDGAEA 176 R + G+ + + +A LEL+ P ++ A + RA+ E GA+ Sbjct: 121 RYEPLLTDGIHAMGISDSVFAGIASTGLAPLELDSKPRAEVDALLARTALRAVNEMGADV 180 Query: 177 IVLGCAGMAELCAAIGRDIGA--PVIDGVTAAVKLAESLVALGLGTAKRG 224 I LGCAGM + + + +G P+IDG A V+L SLV + L T+K+G Sbjct: 181 ICLGCAGMTHMAHVLEKAVGPNIPIIDGTKAGVELLASLVRMNLFTSKQG 230 >SPCC576.02 [E] COG4126 Hydantoin racemase Spo Schizosaccharomyces pombe Length = 236 Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 18/239 (7%) Query: 3 IKLINPNTTWSMTEAMTACARQVAAAGTEVTGVS-PEMGPASIESHYDEALAVPGLLQEI 61 I +INPN++ +T +M + + ++ ++ P+ G A I+S + L + Q + Sbjct: 4 ILVINPNSSTFITTSMEEKLVPLVPSDVKLRFLTCPQPGAAVIDSITEATLTAALVFQAL 63 Query: 62 ERGERDGYDAYVIACFG-DPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLART 120 DG DA +AC+ P + RE P +GI +A++ A + ++T+ R+ Sbjct: 64 TPSVLDGVDAIAVACYSPTPLVDMIRESFALPCMGIVQASVLSALSVGQRIGILTSTYRS 123 Query: 121 SGMAWHLAERYGMQRFCRNVRACEIA-----VLELEDPASDARARITDECRRALAE-DGA 174 + + L + +G+ R R IA VL+L S R + + + LA GA Sbjct: 124 ECLLYELLDSFGVSR----TRVAAIASTGRTVLQLSQMPSQERETLLVQKAQELANTKGA 179 Query: 175 EAIVLGCAGMA----ELCAAIGRDIGAPVIDGVTAAVKLAESLVALGLGTAKRGELARP 229 + I LG A +A ++ A+G +I P+IDGV AAV+L L L T+K G P Sbjct: 180 DVICLGGAALAAIRDQIQVAVGPNI--PIIDGVHAAVELLAGLARQNLHTSKFGIYTYP 236 >SMc04361 [E] COG4126 Hydantoin racemase Sme Sinorhizobium meliloti Length = 219 Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 7/206 (3%) Query: 5 LINPNTTWSMTEAMTACARQVAAAGTEVTGVSPEMGPASIESHYDEALAVPGLLQEIERG 64 LINPN++ + +E M + A++ A V + P I DE A + EI Sbjct: 7 LINPNSSQATSEMMVSIAQKAANGRLAVASATARRSPRMI-LKPDELAAAADEVVEIGTR 65 Query: 65 ERDGYDAYVIACFGDPGLSAARELAQGPVIGIAEAAMHMASLIAPSFSVVTTLARTSGMA 124 G +++ FGDPGL+ RE PV+GI EA+M AS F V TT T +A Sbjct: 66 HEPGCLGIIVSAFGDPGLALLRERVGIPVVGICEASMLEASRDGRRFGVATT---TPDLA 122 Query: 125 WHLAER---YGMQRFCRNVRACEIAVLELEDPASDARARITDECRRALAEDGAEAIVLGC 181 +AER G+ +R L + R + R ++ DGAEA+++G Sbjct: 123 DAIAERARHLGLSHLYSGIRCTPGDPLAVAGDEERLRTSLWHAVRASVDLDGAEAVIIGG 182 Query: 182 AGMAELCAAIGRDIGAPVIDGVTAAV 207 + + + PVI + +AV Sbjct: 183 GPLGKAAEQLQPLFDVPVIGPIPSAV 208