BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0262.p (244 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ... 366 e-101 RSc2106 [E] COG1126 ABC-type polar amino acid transport system, ... 329 4e-90 AGl381 [E] COG1126 ABC-type polar amino acid transport system, A... 306 2e-83 AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ... 305 4e-83 SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ... 296 4e-80 AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ... 290 3e-78 YPO3254 [E] COG1126 ABC-type polar amino acid transport system, ... 289 4e-78 AGl402 [E] COG1126 ABC-type polar amino acid transport system, A... 279 3e-75 SMb20266 [E] COG1126 ABC-type polar amino acid transport system,... 273 2e-73 PA1256 [E] COG1126 ABC-type polar amino acid transport system, A... 271 1e-72 >AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 244 Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/240 (73%), Positives = 206/240 (85%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 M LI I V+K +G NEVLKGI+LDVEPGEVIAIIGKSGSGKSTLLRCINGLE+I G+I Sbjct: 1 MSLIEITEVRKSYGSNEVLKGINLDVEPGEVIAIIGKSGSGKSTLLRCINGLETISAGSI 60 Query: 61 SVAGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAK 120 SVAGA+L +L L+ LRLKVGMIFQQFNLFPH +VG NVM++ +VK + EA A+ Sbjct: 61 SVAGAQLLDDDLHLKALRLKVGMIFQQFNLFPHQTVGGNVMLSQTVVKKTPKPEAEAVAR 120 Query: 121 ANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTV 180 LE+VGL HKFDAYPD+LSGGQQQRVAIARAL+M P ALLCDEITSALDPELV+EVL V Sbjct: 121 TMLERVGLAHKFDAYPDELSGGQQQRVAIARALAMQPIALLCDEITSALDPELVSEVLAV 180 Query: 181 MRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFIGM 240 +R LA EGMTLLMVTHEM+FAR+VC+R+VFMH+G+VHEIGPPEE+F NP TPEL+QF+G+ Sbjct: 181 VRELAGEGMTLLMVTHEMKFARDVCSRVVFMHEGRVHEIGPPEEVFSNPATPELKQFLGV 240 >RSc2106 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Rso Ralstonia solanacearum Length = 245 Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 160/245 (65%), Positives = 194/245 (79%), Gaps = 3/245 (1%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 MPL+ + V K +G+N VLKG+ L VE G+V+AIIG+SGSGKSTLLR INGLE+ID+G I Sbjct: 1 MPLVDLCAVHKHYGNNHVLKGVDLRVESGQVVAIIGRSGSGKSTLLRSINGLEAIDDGQI 60 Query: 61 SVAGAKLGASEL---ELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMK 117 V A L S+ +LR LRL VGM+FQQFNLFPHL+ G NV ++P++VKG+ ++EA Sbjct: 61 VVDNAVLKGSQATPAQLRALRLNVGMVFQQFNLFPHLTAGENVALSPVVVKGMKKSEAAD 120 Query: 118 TAKANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEV 177 A+ + KVGL K+DAYPDQLSGGQQQRVAIARAL+M P+ LLCDEITSALDPELVNEV Sbjct: 121 LARQMMAKVGLADKYDAYPDQLSGGQQQRVAIARALAMQPKVLLCDEITSALDPELVNEV 180 Query: 178 LTVMRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQF 237 L V++ LA EGMTL+MVTHEMRFAR+V ++LVFMHQG +HE GP + LF NPKT EL F Sbjct: 181 LAVVKQLAAEGMTLIMVTHEMRFARDVGDQLVFMHQGLIHESGPAKALFANPKTAELAAF 240 Query: 238 IGMTQ 242 IG Q Sbjct: 241 IGAVQ 245 >AGl381 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 146/238 (61%), Positives = 181/238 (76%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 MP + ++NV K FG EVLKG+SL V GEV A+IG+SGSGKSTLLRC+NGLE I+ G I Sbjct: 1 MPEVIVENVHKSFGALEVLKGVSLTVGRGEVFALIGRSGSGKSTLLRCMNGLEKINSGRI 60 Query: 61 SVAGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAK 120 +AG LG LR LR VG++FQ +NLFPHL+VG N+M+AP IVK V+++E A+ Sbjct: 61 EIAGHALGGDATALRKLRTDVGIVFQSYNLFPHLTVGENIMLAPRIVKDVAKSETKDIAR 120 Query: 121 ANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTV 180 L+ VGL KFD+YPDQLSGGQQQRVAIAR+L+M P+ +L DE+TSALDPEL EVLTV Sbjct: 121 EVLQLVGLSEKFDSYPDQLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTEEVLTV 180 Query: 181 MRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFI 238 M LAK GMT+++VTHEM FAR V +FMH+GK+ E G ELF NP+TPEL+QF+ Sbjct: 181 MENLAKGGMTMILVTHEMAFARRVATETIFMHKGKIWEQGRSAELFANPQTPELRQFV 238 >AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 143/238 (60%), Positives = 184/238 (77%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 M ++ ID V KR+G EVLKG+SL+VE G+V+AIIG+SGSGKST+LRCINGLE GNI Sbjct: 1 MSVVTIDQVHKRYGALEVLKGVSLNVEAGQVVAIIGRSGSGKSTMLRCINGLEEFQSGNI 60 Query: 61 SVAGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAK 120 + AG ++ + +LR LR VG++FQ +NLFPHL+VG N+M++P I + V+ A+A A+ Sbjct: 61 TAAGHRVEQDQTKLRQLRKDVGIVFQSYNLFPHLTVGENIMLSPKITQDVARADADVLAR 120 Query: 121 ANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTV 180 L +VGL KFDAYPD LSGGQQQRVAIAR+L+M P+ +L DE+TSALDPEL EVL V Sbjct: 121 KVLAQVGLAEKFDAYPDMLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTGEVLLV 180 Query: 181 MRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFI 238 M LA+EGMT+L+VTHEM FAR V + VFMHQGK+ E+G ++LF P+TPELQ F+ Sbjct: 181 MEQLAREGMTMLLVTHEMSFARSVAHVTVFMHQGKIWEMGASKQLFEKPQTPELQAFL 238 >SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sme Sinorhizobium meliloti Length = 243 Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 140/238 (58%), Positives = 178/238 (74%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 M ++ N++K FG +VLKG+SL VE GEV+A+IG SGSGKST LRC+NGLES+D G I Sbjct: 1 MSVVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTFLRCLNGLESVDSGEI 60 Query: 61 SVAGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAK 120 VAG ++ ELR LR VG++FQ +NLFPHL+ G N+M+AP+ VKG+ + A AK Sbjct: 61 EVAGHRMSRKPAELRRLRRDVGIVFQSYNLFPHLTAGENIMLAPVQVKGIGKDAARSEAK 120 Query: 121 ANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTV 180 L VGLG +F+AYPD LSGGQQQRVAIAR+L+M P+ LL DE+TSALDPEL EVL V Sbjct: 121 RCLSLVGLGDRFEAYPDMLSGGQQQRVAIARSLAMQPKVLLFDEVTSALDPELTGEVLAV 180 Query: 181 MRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFI 238 + LA++GMT+++VTHEM FAR V NR +FM G +HE GP E F +PKTPEL+ F+ Sbjct: 181 IEKLARDGMTMILVTHEMGFARRVANRTIFMRDGIIHEEGPSAEFFSSPKTPELRAFL 238 >AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 140/239 (58%), Positives = 181/239 (75%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 M L+ I NV+K +G EVLKG+SLDVE GE++ IIG+SGSGKSTLLRCIN LE+I+ G I Sbjct: 1 MALVEIKNVRKNYGPLEVLKGVSLDVEKGEIVTIIGRSGSGKSTLLRCINALETINSGEI 60 Query: 61 SVAGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAK 120 + G + A+ LR +R KVG++FQ FNLFPH+++ +NV +AP++ + A + A Sbjct: 61 LLEGQPVSANMDGLRQMRQKVGIVFQAFNLFPHMTIEKNVTLAPVLTGRTDKRGARELAL 120 Query: 121 ANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTV 180 + LE+VGL K AYP+QLSGGQQQRVAIAR L+MSP +L DE+TSALDPELV EVL V Sbjct: 121 SVLERVGLADKLKAYPEQLSGGQQQRVAIARCLAMSPHLMLFDEVTSALDPELVGEVLKV 180 Query: 181 MRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFIG 239 M +A +GMT+++VTHEM FAR V +LVFMHQG+V E G P+ LF +P+TPEL+ FIG Sbjct: 181 MEEMAAQGMTMVLVTHEMSFARNVATKLVFMHQGRVWEQGDPKRLFADPQTPELKSFIG 239 >YPO3254 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Ype Yersinia pestis Length = 248 Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 143/243 (58%), Positives = 176/243 (72%) Query: 1 MPLIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNI 60 MPLI I+ V+K +G N VLKG+ LD+E GEVI+IIG+SGSGKSTLLRC+NGLE +G+I Sbjct: 1 MPLITINQVQKYYGKNHVLKGVDLDIEIGEVISIIGRSGSGKSTLLRCMNGLEDYQDGSI 60 Query: 61 SVAGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAK 120 + G + + + R + VGM+FQ FNLFPH++ NVM+AP V E + A Sbjct: 61 KLGGMTVTNRDSQAREISRSVGMVFQNFNLFPHMTALENVMLAPRRVLKKGAIECRELAA 120 Query: 121 ANLEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTV 180 LEKVGL + D YP LSGGQQQRVAIARAL+M P+ LLCDEITSALDPELV EVL V Sbjct: 121 QMLEKVGLADRVDYYPANLSGGQQQRVAIARALAMEPKVLLCDEITSALDPELVGEVLKV 180 Query: 181 MRGLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFIGM 240 + LA EGMTL++VTHEM FAREV +R+VFMHQG+V E G LF +P+T EL+QFI Sbjct: 181 LEQLAAEGMTLILVTHEMNFAREVGDRVVFMHQGRVWEQGESRALFADPQTRELKQFISS 240 Query: 241 TQG 243 +G Sbjct: 241 VRG 243 >AGl402 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 240 Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 137/237 (57%), Positives = 176/237 (74%) Query: 3 LIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNISV 62 +I I+NV+K FG EVLKGI+L V GEV+ IIG SGSGKSTLL CINGLE ID G I++ Sbjct: 1 MIEIENVRKSFGPLEVLKGINLTVNKGEVVTIIGGSGSGKSTLLTCINGLEPIDSGKIAI 60 Query: 63 AGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAKAN 122 G ++ A +L LR KVG++FQQ+N FPHL+V NVM+AP V G+S+ +A + A Sbjct: 61 DGTEVHAKSTDLNKLRRKVGIVFQQWNAFPHLTVLENVMLAPRKVLGISKEKAEEIAVKQ 120 Query: 123 LEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTVMR 182 L VGL K YP+++SGGQQQR+AIARAL+MSP+ +L DE+TSALDP LV EVL ++ Sbjct: 121 LTHVGLAEKLKVYPNRMSGGQQQRMAIARALAMSPEYMLFDEVTSALDPMLVGEVLDTLK 180 Query: 183 GLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFIG 239 LA EGMT++ VTHEM FAR+V NR+ F HQG + EIG P++LFG P+ PE Q+F+ Sbjct: 181 MLADEGMTMICVTHEMAFARDVSNRVAFFHQGVMAEIGTPDQLFGAPQHPETQKFLA 237 >SMb20266 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sme Sinorhizobium meliloti Length = 240 Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 134/237 (56%), Positives = 174/237 (73%) Query: 3 LIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNISV 62 +I I+NV+K F EVLKGI L VE GEV+ IIG SGSGKSTLL CINGLE ID G I + Sbjct: 1 MIEIENVRKSFSSLEVLKGIDLTVEKGEVVTIIGGSGSGKSTLLTCINGLEPIDSGRIVI 60 Query: 63 AGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAKAN 122 G + A +L LR KVG++FQQ+N FPHL+V NVM+AP V G+ + +A + A Sbjct: 61 DGTDVHAKGTDLNRLRRKVGIVFQQWNAFPHLTVLENVMLAPRKVLGLPKDKAEEIAVKQ 120 Query: 123 LEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTVMR 182 L VGLG K YP+++SGGQQQR+AIARAL+MSP+ +L DE+TSALDP LV EVL ++ Sbjct: 121 LTHVGLGEKLKVYPNRMSGGQQQRMAIARALAMSPEYMLFDEVTSALDPMLVGEVLDTLK 180 Query: 183 GLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFIG 239 LA+EGMT++ VTHEM FAR+V +R+ F HQG + EIG P+++F +P+ PE Q+F+ Sbjct: 181 MLAEEGMTMICVTHEMTFARDVSDRVAFFHQGIMAEIGSPDQIFASPQNPETQKFLA 237 >PA1256 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Pae Pseudomonas aeruginosa Length = 240 Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 135/236 (57%), Positives = 173/236 (73%) Query: 3 LIAIDNVKKRFGDNEVLKGISLDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGNISV 62 +I I++V K +G EV+KG+ L V+ GEV++IIG SGSGKSTLL CINGLE I G+I V Sbjct: 1 MIEINDVHKAYGQFEVVKGVDLRVDKGEVLSIIGGSGSGKSTLLMCINGLEPIQRGSIRV 60 Query: 63 AGAKLGASELELRNLRLKVGMIFQQFNLFPHLSVGRNVMIAPMIVKGVSEAEAMKTAKAN 122 G + A +L LR K+G++FQQ+N FPHL+V NVM+AP V G S AEA A Sbjct: 61 DGIDVHARGTDLNRLRRKIGIVFQQWNAFPHLTVLENVMLAPRKVLGKSRAEAEAMALKQ 120 Query: 123 LEKVGLGHKFDAYPDQLSGGQQQRVAIARALSMSPQALLCDEITSALDPELVNEVLTVMR 182 L VGLG K +P +LSGGQQQR+AIARAL+MSP +L DE TSALDP+LV EVL MR Sbjct: 121 LTHVGLGDKLKVFPQRLSGGQQQRMAIARALAMSPDYMLFDEATSALDPQLVGEVLDTMR 180 Query: 183 GLAKEGMTLLMVTHEMRFAREVCNRLVFMHQGKVHEIGPPEELFGNPKTPELQQFI 238 LA+EGMT+++VTHE+RFAR+V +R+ F G VHEIGPP+++ GNP+ PE +F+ Sbjct: 181 LLAEEGMTMVLVTHEIRFARDVSDRVAFFRNGLVHEIGPPDQVIGNPQRPETVEFL 236