BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0258.p         (989 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2276 Non COG                                                       769   0.0  
RSc3137 Non COG                                                       533   e-151
PA3064 [S] COG3868 Uncharacterized conserved protein Pae Pseudom...   507   e-143

>RSc2276 Non COG
          Length = 948

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/934 (46%), Positives = 566/934 (60%), Gaps = 29/934 (3%)

Query: 38  GSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRNPA-ARTRAAADGMH 96
           G+ PAQ     AP   + A++YG  PP+A L+AFD  VVEP+   +P+ ART A      
Sbjct: 33  GALPAQAATAEAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFDPSRARTPAT----- 84

Query: 97  QLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQ 156
           Q FAYVS+GEV P R +Y+ LP   L G NAAW SRVIDQ+ P W DF++D +IAPLW +
Sbjct: 85  QWFAYVSVGEVAPGRRWYQALPKAWLAGSNAAWASRVIDQSQPQWPDFYVDHVIAPLWDK 144

Query: 157 GWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAP 216
           G+RGFFLDTLDSYQL AK  A RA Q   MI  +R  K RYPEAKLI NRGFE+LP++  
Sbjct: 145 GYRGFFLDTLDSYQLVAKDAAARAAQEAGMIRVIRAIKARYPEAKLIFNRGFEILPQVHD 204

Query: 217 LTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGA 276
           L YAVA ESLYR +D G + Y  V D DRAWLMGQ +  R+ Y LPVI+IDY  P     
Sbjct: 205 LVYAVAFESLYRSWDQGSKQYREVNDADRAWLMGQARRIRDEYRLPVISIDYCPPAD--- 261

Query: 277 RALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRF 336
           RA ARETA++I A G IP+V D  L ++GV  +E++PR VL+L D A   D+ T+E  RF
Sbjct: 262 RACARETARRIEAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDRAPNTDIDTSEGVRF 321

Query: 337 LGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ--RLGPWIGQRIKEG 394
           L + LN LG   E+ D+G+  LP E    RYAGVV W  SG   Q   L  W+ QRI +G
Sbjct: 322 LAMPLNFLGYDVEYADLGQP-LPAEVPPDRYAGVVVWINSGPVRQVAALSSWVRQRIHDG 380

Query: 395 VPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFETRPRVDRTQLENV 454
           V +A  +  G         MLGL          L V   D  ++GFE  PR DR   + +
Sbjct: 381 VRIAFMNELGLPADGSLTDMLGLQLVRGHATGPLSVVSQD-RIVGFEMAPRPDRRAAQPI 439

Query: 455 RLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKR 514
           R+       LLR+K G D  +DAAAITPWGG+ L P+A+ +   I+  RWV+QP+ FL+R
Sbjct: 440 RVGADGQS-LLRLKSG-DFEFDAAAITPWGGYVLNPYAVFSLGTIEQSRWVIQPLAFLRR 497

Query: 515 ALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTV 574
           AL LPDM +PDVT+E GRR+   H+DGDGF S+AE+PG  ++ EVL +E+W+RY  P T+
Sbjct: 498 ALALPDMPIPDVTSENGRRLMLVHVDGDGFASRAEFPGPEYSGEVLMQEVWERYGIPTTL 557

Query: 575 SVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWADAMHDTRTADITQ 634
           SV+EGE+ P G+YP+L+ +  A+ARKMF LPY+E  +H++SHPF W   +     A    
Sbjct: 558 SVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWGRTVP---GAPAQA 614

Query: 635 MDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTY 694
             GD++  L IP YKF+L+REI  S+ YIN  L PP K+  +  W+G+C PP  A+   +
Sbjct: 615 GGGDSAFALTIPGYKFSLEREIGGSIRYINARLAPPDKRVRIVQWSGDCRPPELAVRMAW 674

Query: 695 LDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENVYTGNWTGPFYGFE 753
             G  N+NGGDT IT+S  +WT+IA+ G+ K  G YQVFAPNQ+ENVYT +WTGP+YGF+
Sbjct: 675 DAGVGNINGGDTTITRSSPSWTEIASLGIDKGPGAYQVFAPNQNENVYTNDWTGPYYGFD 734

Query: 754 RAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQPFTRLYVSQYIRKV 813
           R IE+ ++T  P RFK +++YYH Y+GTK AS+ AL K++ +A AQP   +Y + Y+ KV
Sbjct: 735 RLIETLQMTDTPYRFKPINLYYHMYSGTKLASLKALKKVYDYALAQPVLPIYATDYVAKV 794

Query: 814 IDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGIAPGPSGRYLITSA 872
           +DF + +IAR  D A V R    LR LR + PGTP     A G+AG      G Y+    
Sbjct: 795 LDFRDMAIARDGD-AWVVRGNGDLRELRWMAPGTPRL-ADAHGVAGYGKAAGGIYIHLDG 852

Query: 873 AEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLANGPSTFSVAGARSC 932
              R        A     L EA   V   +R  NG    + F           +A A +C
Sbjct: 853 GAARFAVSTDAQAVQPAYLAEAAAFVQRLERRGNG----MSFDAGGYYKPFVRLANAGAC 908

Query: 933 SASADGAALPAGKSVSITGQSWFKNFTAKSAVHQ 966
           S   DG    A  +   T +       A+S  +Q
Sbjct: 909 SIQVDGRPARAAHAQDNTVRVELSGVAAQSVTYQ 942


>RSc3137 Non COG
          Length = 985

 Score =  533 bits (1373), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 374/999 (37%), Positives = 497/999 (49%), Gaps = 129/999 (12%)

Query: 19  RMVRTFVWTLAAAAGALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEP 78
           R  R  VW  AAA  A    SAP Q     A A    A YYG + P+ +LQAFD  V++P
Sbjct: 11  RQWRWIVWLGAAATLA----SAPCQAAEPPAQAAPQIAVYYGSDVPVPELQAFDWVVLDP 66

Query: 79  EFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNA 138
                  AR  AAA    Q  A V L                          ++V   +A
Sbjct: 67  AHAARFDARQPAAA----QWLARVDLA-------------------------AQVDAMHA 97

Query: 139 PGWRDFFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYP 198
            GW D  ++++  PL AQG++GF LD LD+ Q  A    +      A+ A +R  + R P
Sbjct: 98  DGWPDTAVERLFVPLLAQGYKGFLLDGLDALQRSAPQAGD------AVAALVRALRARMP 151

Query: 199 EAKLILNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARER 258
           EA+L+   G   L  +AP    V    L R       S   V D DRA  +  ++   E+
Sbjct: 152 EARLLAG-GTAWLDTLAPQLAGVVTPGLVRERADDAGSLREVSDADRAARIAMLRRIGEQ 210

Query: 259 YHLPVIAIDYVDPQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLV 318
           Y LP IA+DY     S +R   RETA    A G   +        +G+  +E++PR VL+
Sbjct: 211 YRLPAIALDYC---ASYSRDCLRETAGVARAAGVTSYATTPTADMIGIGRLEVMPRRVLL 267

Query: 319 LLDVAEGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGT 378
           +     G   +T  A  +L + +N+LG R EF D  +  LPT     RYAGVVTWF    
Sbjct: 268 IEPQEPGTSANTMPAVLYLAMPINYLGYRVEFADAYKP-LPTV-TPDRYAGVVTWFDG-- 323

Query: 379 NHQRLGPW---IGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDP 435
           N  R G W   +   +  GV VA+F+ FG  M    A  LGL +        L +   DP
Sbjct: 324 NAPRPGAWAAWLKHTVAAGVRVAMFNQFGLTMDAAMARSLGLKTVPGTPSGPLTIVSRDP 383

Query: 436 ELMGFETRPRVDRTQLENVRLSD--PAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAI 493
            ++GFE +P  +R     VR+    P A  LLR+  GR  TYDAAAI PWGG+ L PF +
Sbjct: 384 -MVGFELQPHPERRDAVGVRVDPDLPQAQPLLRLSSGR-YTYDAAAILPWGGYVLRPFGV 441

Query: 494 TTAPVIDPPRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGS 553
              P +D  RWV+QP+ FL+RAL LP M VPD TTE GRR+ T H+DGDGF S+ E+P  
Sbjct: 442 FRMPEVDQARWVIQPLDFLRRALALPAMPVPDTTTENGRRLMTVHIDGDGFASRTEFPPG 501

Query: 554 PFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHS 613
            FA + L REIW RY+ P TVS++EGE+S +G+YP+L+ Q  ++AR +F+ PY+E ASH+
Sbjct: 502 EFAGQALLREIWARYKVPTTVSIIEGEVSAEGMYPKLAPQLESVARTIFSEPYVEVASHT 561

Query: 614 FS--------------------------------HPFNWA-------------------- 621
           FS                                HPFN A                    
Sbjct: 562 FSHPFNWLRTVDAPSLSESTDDHRVDTPGNRTFSHPFNCALPFDTPAAQTAAAAQASQTV 621

Query: 622 ---------------DAMHDTRTADITQMD-GDASRTLEIPNYKFNLQREIKESMDYINN 665
                           A+   + +  +Q D G     L IP Y F+  REI  S+ YIN 
Sbjct: 622 PTSESQPPLQSLESLQALQALQPSQPSQEDVGSDVYGLNIPRYHFSFDREIAGSIHYINT 681

Query: 666 TLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRK 725
            L PPGK   V LW+GN   PP A+ +T   G LNMNGGDT IT++  +WT +A  GV K
Sbjct: 682 RLAPPGKPVRVLLWSGNGQVPPVAVQKTVEAGVLNMNGGDTYITRTNPSWTAVAPLGVDK 741

Query: 726 -QGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPA 784
             G +QVFAP Q+EN+YT  W GP+YGF RAIE++ELT  P+R K + IYYH Y+GTK A
Sbjct: 742 GDGLFQVFAPAQNENIYTNLWHGPYYGFTRAIETFELTDRPLRLKPLGIYYHMYSGTKVA 801

Query: 785 SVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTLRLP- 843
           S+AAL +++ WA  QP   +Y S YI KV+DF N ++AR  D A V R    LRT+R   
Sbjct: 802 SLAALRQVYDWALTQPVMPVYASDYILKVLDFRNFAVARDGD-AWVVRGDGDLRTVRWSG 860

Query: 844 PGTPDYDLSAPGIAGIAPGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGDFQR 903
            G P    +            G Y+  ++   R      P  QALP + EA G++  +QR
Sbjct: 861 AGVPRLADARDVAGFAPAAGGGTYIHLASGSARFAMEDGP--QALPYVREASGRLTRWQR 918

Query: 904 SVNGNKVELRFSLLANGPSTFSVAGARSCSASADGAALP 942
           S +G  V +  +        F  A A  C A+ DG  +P
Sbjct: 919 SADGRAVSVDVAGYVRPFIRF--ANAARCRATVDGREVP 955


>PA3064 [S] COG3868 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 948

 Score =  507 bits (1305), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 337/903 (37%), Positives = 484/903 (53%), Gaps = 40/903 (4%)

Query: 52  PTSAAFYYGVNPPLADLQAFDVAVVEPEFVRNPAARTRAAADGMHQLFAYVSLGEVQPSR 111
           P+S AF+Y   PPLA+L  FD  V+E   ++ PA        G    FAY+S+GE     
Sbjct: 49  PSSVAFWYAERPPLAELSQFDWVVLEAAHLK-PADVGYLKEQGSTP-FAYLSVGEFDGDA 106

Query: 112 PYYKQLPPGLLRGD----NAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQGWRGFFLDTLD 167
                   GL RG     N AW S+V+D  AP WR   L K  A L  QG+ G FLDTLD
Sbjct: 107 AAIAD--SGLARGKSAVRNQAWNSQVMDLAAPSWRAHLL-KRAAELRKQGYAGLFLDTLD 163

Query: 168 SYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAPLTYAVAAESLY 227
           S+QL  + +  R  Q +A+ + L +  R+ P  KL  NRGFE+LPE+  +  AVA ES++
Sbjct: 164 SFQL--QAEERREGQRRALASFLAQLHRQEPGLKLFFNRGFEVLPELPGVASAVAVESIH 221

Query: 228 RGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGARALARETAQKI 287
            G+DA    Y  V  +DR WL G +   R +  +P++AIDY+ P++   R  AR  A ++
Sbjct: 222 AGWDAAAGQYREVPQDDRDWLKGHLDALRAQ-GMPIVAIDYLPPER---RDEARALAARL 277

Query: 288 SADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRFLGIQLNHLGLR 347
            ++G++P+V+   L  +GVS VE+ PR + +L D  EGD L  +    +LG  L +LG R
Sbjct: 278 RSEGYVPFVSTPALDYLGVSDVEVQPRRIALLYDPREGD-LTLSPGHVYLGGLLEYLGYR 336

Query: 348 YEFRDVGREGLPTEPLAGRYAGVVTWFRSG--TNHQRLGPWIGQRIKEGVPVAIFSAFGF 405
            ++     + LP  PL+G YAGVVTW  SG          WI  R+ E VPVA  +    
Sbjct: 337 VDYLPTD-QPLPERPLSGLYAGVVTWMTSGPPLASDAFDNWIAARLDEKVPVAFLAGLPT 395

Query: 406 QMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFETRPRVDRTQ-LENVRLSDPA--AP 462
           +   L    LG+   S  +  +     +D  L+G    P V R + L  + + DPA   P
Sbjct: 396 ENDGLLQ-RLGIRRLSQKLKVKPSTETHDQALLGSFEAPLVIRIRDLPALTVLDPARVTP 454

Query: 463 VLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKRALRLPDMA 522
            L    DG++  Y   A   WGGFALAP+ +      +  RW+L P  FL++ALRL  + 
Sbjct: 455 ALKLKGDGKE--YVPVATADWGGFALAPYVLEEGS--EHRRWILDPFAFLRKALRLVPLP 510

Query: 523 VPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELS 582
            PD TTE GRRI T H+DGDGF S+AE PGSP+A + +  +    Y F  +VSV+EGE+ 
Sbjct: 511 SPDATTENGRRIATVHIDGDGFVSRAEVPGSPYAGQQVLEDFIKPYPFLTSVSVIEGEVG 570

Query: 583 PQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWADAMHDTRTADITQMDGDASRT 642
           P+G+YP L+ +   +AR++F    +E ASH+FSHPF W   + +         +      
Sbjct: 571 PKGMYPHLARELEPIARRIFADDKVEVASHTFSHPFFWQPQLAEQGE----NFEAQYGYK 626

Query: 643 LEIPNY-KFNLQREIKESMDYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNM 701
           + IP Y K +  RE+  + DYI   L  P K  ++  W+G+ +P    I   Y  G +N+
Sbjct: 627 MAIPGYDKVDFVREVIGARDYIEQRLTTPRKPVKMIFWSGDALPDAATIKLAYDAGLMNV 686

Query: 702 NGGDTMITKSRNTWTDIAAQGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYEL 761
           NGG+T +T++  + T +       +G  Q +AP  +ENVYT  W GP+YGF   I+++ L
Sbjct: 687 NGGNTALTRAFPSLTGLYPLIRPTRGGVQYYAPIINENVYTNLWQGPYYGFRGVIDTFAL 746

Query: 762 TGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSI 821
           T  P R + + +YYHFY+GTK AS+  +H+I+   QA+    L++S YI ++      S+
Sbjct: 747 TDSPRRLRGLHLYYHFYSGTKQASIRTMHQIYAAMQAEHPLSLWMSDYIPRLEGLHRASL 806

Query: 822 ARTADGALVYRTGAHLRTLRLPP--GTPDYDLSAPGIAGIAPGPSGRYLITSAAEVRLKP 879
           A+ ADG+   R  A LRT+RL P  G PD   S  G+AG+   P GRY+  SAA  RL  
Sbjct: 807 AKRADGSWQLRGFAALRTVRLDPALGWPDLGRST-GVAGVRDLPQGRYVHLSAANARLV- 864

Query: 880 PAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLANGPSTFSVAGARSCSASADGA 939
             + +    P L EA   +  ++   +G +VE  F+   + P    V  A  C  SA G 
Sbjct: 865 -LRDSRDPRPALEEANLPLKHWRYRDDG-RVE--FAFAGHLPLRLVVRAAGDCRLSAAGK 920

Query: 940 ALP 942
           A P
Sbjct: 921 AFP 923