BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0211.p         (340 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cj1316c [D] COG0037 Predicted ATPase of the PP-loop superfamily ...   133   6e-31
Cj1324 [D] COG0037 Predicted ATPase of the PP-loop superfamily i...   107   5e-23
FN1679 [D] COG0037 Predicted ATPase of the PP-loop superfamily i...    88   3e-17

>Cj1316c [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Cje Campylobacter jejuni
          Length = 378

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 154/286 (53%), Gaps = 8/286 (2%)

Query: 5   KLGLNPLLVSYNKYFNTPLGIRNLANLRIRFNCDILSQNVNPLSVKRIVRTTLRRFGSIY 64
           +LGLNPL V +     T +G +NL NL      D++    +P   +++ R    R G   
Sbjct: 80  ELGLNPLCVCFEPSVPTKIGRKNLDNLN-HLGVDLIHIKRDPKVYQKLAREAFIRTGDNE 138

Query: 65  WPILAGHTVFPVQTAVRYRIPLIIWGAHQGLEQVGMFSHEHEVEMTRRYRKDHD-LMGYE 123
           W    G      + AV + +PLIIWG    +E  G  S +++  + R + ++   L+G  
Sbjct: 139 WQNHLGIFTSVPRIAVNFGVPLIIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNR 198

Query: 124 ADDLLSIFDDLAEEDVGQYRYPDDAALESVGVRGIYLGNYIRWDPKAQHEQMMSSHGYQS 183
           A D+L + + + E+D+  Y YP D  L+ VGV G++LG Y +WD K   E +   +G+ +
Sbjct: 199 ASDMLGV-NGITEKDLFLYTYPSDEELQRVGVTGLFLGYYFKWDYKKILE-ISKKYGFLT 256

Query: 184 AAFP--RTFDSYDHVDCFNYMDLHDRIKLYKHGYSRVTDHATREIRHGRMSREQGLALVR 241
              P   T+++++++DC++   +HD +K  K+G+ R TD+A  +IR G +SRE+G+ L +
Sbjct: 257 LDHPVETTYENFENLDCYS-NHVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLAQ 315

Query: 242 THEQR-PLVWLSQFCQWLGINQRSLEFILNQHRNPQFWQEGSPGDW 286
            ++ + P   + ++ ++ G ++   + I++   N + ++    G +
Sbjct: 316 KYDGKPPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKRDENGKF 361


>Cj1324 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Cje Campylobacter jejuni
          Length = 373

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 150/298 (50%), Gaps = 18/298 (6%)

Query: 1   VVKEKLGLNPLLVSYNKYFN-TPLGIRNLANLRIRFNCDILSQNVNPLSVKRIVRTTLRR 59
           ++KEKLG+NP+L S    F  T  G +NL NL   F C I+S   +  + K+++  T  +
Sbjct: 83  IMKEKLGMNPILFSVEDNFTMTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEK 142

Query: 60  FGSIYWPILAGHTVFPVQTAVRYRIPLIIWGAHQGLEQVGMFSHEHEVEMTRRYRKDHDL 119
           +G   W I      +P   A+++  PL+++G +   E  G  + E          K+  L
Sbjct: 143 YGKPTWFIDRLIYSYPFAMALKFNTPLLVYGENVSYEYGGSDTEETPSA------KEIFL 196

Query: 120 MGYEADDLLSIF--DDLAEEDVGQYRYPDDAALESVGVRGIYLGNYIRWDPKAQHEQMMS 177
            G  +D  ++ F  D++ EE++  +  P+   L+ +    IYL  +++W+  + +     
Sbjct: 197 NGVASDLNINEFIDDEIKEENLQLFFNPNKDKLDKLN--PIYLSYFVKWNSYSNY-IFAK 253

Query: 178 SHGYQS--AAFPRTF--DSYDHVDCFNYMDLHDRIKLYKHGYSRVTDHATREIRHGRMSR 233
           S G+      + RT   +++D VD   Y+ LH  +K  K G++  +D+A R +R+G +SR
Sbjct: 254 SRGFTDLEGEWDRTMCAENFDQVDSIGYI-LHAWMKYPKFGHACASDYAARFVRYGLLSR 312

Query: 234 EQGLALVRTHEQR-PLVWLSQFCQWLGINQRSLEFILNQHRNPQFWQEGSPGDWTFRG 290
           ++ + LV+  + +     +  FC ++GI++ +   I+ +H N   + +   G++  + 
Sbjct: 313 KEAIELVQKRDHKLDNKCVEDFCNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKN 370


>FN1679 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Fnu Fusobacterium nucleatum
          Length = 373

 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 142/297 (47%), Gaps = 23/297 (7%)

Query: 2   VKEKLGLNPLLVSYNKYFNTPLGIRNLANLRIRFNCDILSQNVNPLSVKRIVRTTLRRFG 61
            KEKLGL+ LLV+      T +G +N+ NL I+   DI+    NP   K++V+T   ++G
Sbjct: 79  AKEKLGLHVLLVNGEPDQITEIGRKNIENL-IQKGFDIIKLRPNPKITKQLVKTAFLKYG 137

Query: 62  SIYWPILAGHTVFPVQTAV-----RYRIPLIIWGAHQGLEQVGMFSHEHEVE-MTRRYRK 115
           +   P+ +  T +P+ T+      ++ IPLII G +  L  +G+ + +  V+        
Sbjct: 138 N---PMKS--TEYPLWTSAYIIADKFDIPLIIQGENAAL-TLGVVNTKLGVDGNAMNVDG 191

Query: 116 DHDLMGYEADDLLSIFDDLAEEDVGQYRYPDDAALESVGVRGIYLGNYIRWDPKAQHEQM 175
            + L G  A D +   D L  ED+  Y++PD   +   G++ I+L  Y +   +  +   
Sbjct: 192 GNTLNGCNASDWVE--DGLPLEDLYMYQFPDKEKMAKKGIKAIWLQYYAKEWSQVYNADF 249

Query: 176 MSSHGYQSAAFPRTFD-----SYDHVDCFNYMDLHDRIKLYKHGYSRVTDHATREIRHGR 230
             + G          D      Y  +D  N   ++  +K YK G+   TD A  +IR GR
Sbjct: 250 SIARGLLGRTVEDLHDLGRYRRYSSLDS-NLHIVNQMLKYYKFGFGFATDEACYDIREGR 308

Query: 231 MSREQGLALVRTHEQRP-LVWLSQFCQWLGINQRSLEFILNQHRNPQFWQEGSPGDW 286
           ++R+  + L+  ++ +    ++ +FC+++ I +      ++Q+ N + + E   G W
Sbjct: 309 LTRDDAIWLINEYDGKCGKQYIDEFCKYIEITEEEFWNTVDQYVNKELF-EKKDGKW 364