BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0208.p         (341 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FN1679 [D] COG0037 Predicted ATPase of the PP-loop superfamily i...   234   3e-61
Cj1316c [D] COG0037 Predicted ATPase of the PP-loop superfamily ...   162   1e-39
Cj1324 [D] COG0037 Predicted ATPase of the PP-loop superfamily i...   127   3e-29

>FN1679 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Fnu Fusobacterium nucleatum
          Length = 373

 Score =  234 bits (596), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 201/343 (58%), Gaps = 12/343 (3%)

Query: 1   VDWQERFDILQDLLSTFQRKPGQQFDCIIGVSGGKDSTRQALWVRDKLKLRPLLACLTYP 60
           +DW+ R   L+++    ++     +DC+IGVSGGKDST QA++ ++KL L  LL  +   
Sbjct: 36  IDWKSREKELKEIAEWAKKTSKGPYDCVIGVSGGKDSTFQAIYAKEKLGLHVLL--VNGE 93

Query: 61  PEQVTQRGVDNISNLIELGFDVVMSAPAPGTWRELMRESFERFTNWARSTELALFSSVPQ 120
           P+Q+T+ G  NI NLI+ GFD++   P P   ++L++ +F ++ N  +STE  L++S   
Sbjct: 94  PDQITEIGRKNIENLIQKGFDIIKLRPNPKITKQLVKTAFLKYGNPMKSTEYPLWTSAYI 153

Query: 121 LAIRYDIKLILWGENPGLQLGDLKTLGRTGYDGN--NLRNMNTLSGGGLDWMLQSGHQLR 178
           +A ++DI LI+ GEN  L LG + T  + G DGN  N+   NTL+G      ++ G  L 
Sbjct: 154 IADKFDIPLIIQGENAALTLGVVNT--KLGVDGNAMNVDGGNTLNGCNASDWVEDGLPLE 211

Query: 179 DLIPYQYPSPEEFDRHGLQIVYLGWFLGDWSLANNGMYSATNGLQIREDTVANTGDL--- 235
           DL  YQ+P  E+  + G++ ++L ++  +WS   N  +S   GL  R  TV +  DL   
Sbjct: 212 DLYMYQFPDKEKMAKKGIKAIWLQYYAKEWSQVYNADFSIARGLLGR--TVEDLHDLGRY 269

Query: 236 LGVTSLDEDWVTLNQMIKYYKFGFGRVTDYVNEEIRLGRLSRQRGIELVEAHDNACSDEY 295
              +SLD +   +NQM+KYYKFGFG  TD    +IR GRL+R   I L+  +D  C  +Y
Sbjct: 270 RRYSSLDSNLHIVNQMLKYYKFGFGFATDEACYDIREGRLTRDDAIWLINEYDGKCGKQY 329

Query: 296 IDSFCHYIGITSGYFWNKVHASLNRDLFDLDSQGRITRKFKVG 338
           ID FC YI IT   FWN V   +N++LF+    G+   KFKVG
Sbjct: 330 IDEFCKYIEITEEEFWNTVDQYVNKELFE-KKDGKWIPKFKVG 371


>Cj1316c [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Cje Campylobacter jejuni
          Length = 378

 Score =  162 bits (409), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 169/337 (50%), Gaps = 10/337 (2%)

Query: 1   VDWQERFDILQDLLSTFQRKPGQQFDCIIGVSGGKDSTRQALWVRDKLKLRPLLACLTYP 60
           ++WQER     +L+  +++ P   +DC+IGVSGGKDST Q + + + L L PL  C+ + 
Sbjct: 37  INWQEREKEFFELIKKYKKHP--VYDCVIGVSGGKDSTFQVVKMLE-LGLNPL--CVCFE 91

Query: 61  PEQVTQRGVDNISNLIELGFDVVMSAPAPGTWRELMRESFERFTNWARSTELALFSSVPQ 120
           P   T+ G  N+ NL  LG D++     P  +++L RE+F R  +      L +F+SVP+
Sbjct: 92  PSVPTKIGRKNLDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPR 151

Query: 121 LAIRYDIKLILWGENPGLQLGDLKTLGRTGYDGNN-LRNMNTLSGGGLDWML-QSGHQLR 178
           +A+ + + LI+WGE+P ++ G   +       G   L     L G     ML  +G   +
Sbjct: 152 IAVNFGVPLIIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEK 211

Query: 179 DLIPYQYPSPEEFDRHGLQIVYLGWFLGDWSLANNGMYSATNGLQIREDTVANTGDLLGV 238
           DL  Y YPS EE  R G+  ++LG++   W        S   G    +  V  T +    
Sbjct: 212 DLFLYTYPSDEELQRVGVTGLFLGYYF-KWDYKKILEISKKYGFLTLDHPVETTYE--NF 268

Query: 239 TSLDEDWVTLNQMIKYYKFGFGRVTDYVNEEIRLGRLSRQRGIELVEAHDNACSDEYIDS 298
            +LD     ++  +KY K+GFGR TD    +IRLG +SR+ G+ L + +D     + I  
Sbjct: 269 ENLDCYSNHVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLAQKYDGKPPKKAIKK 328

Query: 299 FCHYIGITSGYFWNKVHASLNRDLFDLDSQGRITRKF 335
           +  + G +   F   V +  N+ +F  D  G+  R +
Sbjct: 329 YLEFSGFSEEEFQKIVDSFTNKKIFKRDENGKFIRDY 365


>Cj1324 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Cje Campylobacter jejuni
          Length = 373

 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 20/345 (5%)

Query: 1   VDWQERFDILQDLLSTFQRKPGQ-QFDCIIGVSGGKDSTRQALWVRDKLKLRPLLACLTY 59
           +D++ RF  L+ L   ++R  G+ ++DC I VSGGKDS  Q   +++KL + P+L  +  
Sbjct: 40  IDYKARFKELEVLCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVE- 98

Query: 60  PPEQVTQRGVDNISNLIE-LGFDVVMSAPAPGTWRELMRESFERFTNWARSTELALFSSV 118
               +T+ G  N+ NL E  G  ++   P   T +++M ++FE++       +  ++S  
Sbjct: 99  DNFTMTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYP 158

Query: 119 PQLAIRYDIKLILWGENPGLQLGDLKTLGRTGYDGNNLRNMNTLSGGGLDWMLQSGHQLR 178
             +A++++  L+++GEN   + G        G D     +   +   G+   L     + 
Sbjct: 159 FAMALKFNTPLLVYGENVSYEYG--------GSDTEETPSAKEIFLNGVASDLNINEFID 210

Query: 179 DLIP------YQYPSPEEFDRHGLQIVYLGWFLGDWSLANNGMYSATNGLQIREDTVANT 232
           D I       +  P+ ++ D+  L  +YL +F+  W+  +N +++ + G    E     T
Sbjct: 211 DEIKEENLQLFFNPNKDKLDK--LNPIYLSYFVK-WNSYSNYIFAKSRGFTDLEGEWDRT 267

Query: 233 GDLLGVTSLDEDWVTLNQMIKYYKFGFGRVTDYVNEEIRLGRLSRQRGIELVEAHDNACS 292
                   +D     L+  +KY KFG    +DY    +R G LSR+  IELV+  D+   
Sbjct: 268 MCAENFDQVDSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDHKLD 327

Query: 293 DEYIDSFCHYIGITSGYFWNKVHASLNRDLFDLDSQGRITRKFKV 337
           ++ ++ FC++IGI+   FW  V    N DLF  +  G    K K+
Sbjct: 328 NKCVEDFCNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKL 372